Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

Click here to switch to the map view.

The map label for this gene is 46445635

Identifier: 46445635

GI number: 46445635

Start: 123

End: 338

Strand: Reverse

Name: 46445635

Synonym: pc0001

Alternate gene names: NA

Gene position: 338-123 (Counterclockwise)

Preceding gene: 46445639

Following gene: NA

Centisome position: 0.01

GC content: 33.8

Gene sequence:

>216_bases
ATGTTTTCACCTCTCTTAGTTTTTCTTAAAACTTGCGCTGTCTCTTCATTAAGCTCATGGCTTTTGTTGCAATCATGGCC
GGCACATTTGGGTACCTCTTGTCAGGCAAAAGATAAAAAATATTTGTTAATAGCCATCTACTTTTTTGCTGCTAACATTT
TAATAATATACATCTTCTCTTCTGTTATACAATCTACGCTTAATCTAGCTTTATGA

Upstream 100 bases:

>100_bases
TTCTTTAAATCTTTTTTGAACTTAGTCGAATTTTTAAGCTGAAGTATTCGATTTCATCCCCACTGCTTTCCAAAAGTCTT
CTAGGGATTCGTGGCTTTCT

Downstream 100 bases:

>100_bases
GTCTGTCCCATAAGAACTTCCTTTTGTGATAACTCTATTATACGCAAAATCAACGTTTGTGAAAATTCAGTTAATTAAAT
ACCCAGTTAAATTTAATTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 71; Mature: 71

Protein sequence:

>71_residues
MFSPLLVFLKTCAVSSLSSWLLLQSWPAHLGTSCQAKDKKYLLIAIYFFAANILIIYIFSSVIQSTLNLAL

Sequences:

>Translated_71_residues
MFSPLLVFLKTCAVSSLSSWLLLQSWPAHLGTSCQAKDKKYLLIAIYFFAANILIIYIFSSVIQSTLNLAL
>Mature_71_residues
MFSPLLVFLKTCAVSSLSSWLLLQSWPAHLGTSCQAKDKKYLLIAIYFFAANILIIYIFSSVIQSTLNLAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7928; Mature: 7928

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSPLLVFLKTCAVSSLSSWLLLQSWPAHLGTSCQAKDKKYLLIAIYFFAANILIIYIFS
CCHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SVIQSTLNLAL
HHHHHHHHHCC
>Mature Secondary Structure
MFSPLLVFLKTCAVSSLSSWLLLQSWPAHLGTSCQAKDKKYLLIAIYFFAANILIIYIFS
CCHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SVIQSTLNLAL
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA