| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46445635
Identifier: 46445635
GI number: 46445635
Start: 123
End: 338
Strand: Reverse
Name: 46445635
Synonym: pc0001
Alternate gene names: NA
Gene position: 338-123 (Counterclockwise)
Preceding gene: 46445639
Following gene: NA
Centisome position: 0.01
GC content: 33.8
Gene sequence:
>216_bases ATGTTTTCACCTCTCTTAGTTTTTCTTAAAACTTGCGCTGTCTCTTCATTAAGCTCATGGCTTTTGTTGCAATCATGGCC GGCACATTTGGGTACCTCTTGTCAGGCAAAAGATAAAAAATATTTGTTAATAGCCATCTACTTTTTTGCTGCTAACATTT TAATAATATACATCTTCTCTTCTGTTATACAATCTACGCTTAATCTAGCTTTATGA
Upstream 100 bases:
>100_bases TTCTTTAAATCTTTTTTGAACTTAGTCGAATTTTTAAGCTGAAGTATTCGATTTCATCCCCACTGCTTTCCAAAAGTCTT CTAGGGATTCGTGGCTTTCT
Downstream 100 bases:
>100_bases GTCTGTCCCATAAGAACTTCCTTTTGTGATAACTCTATTATACGCAAAATCAACGTTTGTGAAAATTCAGTTAATTAAAT ACCCAGTTAAATTTAATTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 71; Mature: 71
Protein sequence:
>71_residues MFSPLLVFLKTCAVSSLSSWLLLQSWPAHLGTSCQAKDKKYLLIAIYFFAANILIIYIFSSVIQSTLNLAL
Sequences:
>Translated_71_residues MFSPLLVFLKTCAVSSLSSWLLLQSWPAHLGTSCQAKDKKYLLIAIYFFAANILIIYIFSSVIQSTLNLAL >Mature_71_residues MFSPLLVFLKTCAVSSLSSWLLLQSWPAHLGTSCQAKDKKYLLIAIYFFAANILIIYIFSSVIQSTLNLAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7928; Mature: 7928
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSPLLVFLKTCAVSSLSSWLLLQSWPAHLGTSCQAKDKKYLLIAIYFFAANILIIYIFS CCHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH SVIQSTLNLAL HHHHHHHHHCC >Mature Secondary Structure MFSPLLVFLKTCAVSSLSSWLLLQSWPAHLGTSCQAKDKKYLLIAIYFFAANILIIYIFS CCHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH SVIQSTLNLAL HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA