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The map label for this gene is parB

Identifier: 45659301

GI number: 45659301

Start: 4262984

End: 4263859

Strand: Reverse

Name: parB

Synonym: LIC13488

Alternate gene names: 45659301

Gene position: 4263859-4262984 (Counterclockwise)

Preceding gene: 45659302

Following gene: 45659300

Centisome position: 99.69

GC content: 36.07

Gene sequence:

>876_bases
ATGGCACTCAAACCCAAAGCCCTCGGAAGAGGTCTTGGAAATTTAATTCCAGTTAACGAAAGTAAAACTCCTATCGATTC
TTCTTCGGAAGGTGCGCTTCGTGAAATAAAAATTAGTGAAATTCGCCCAAATCCAGGACAACCTAGAAAAACTTTTTCGG
AAGAATCTTTAAAAGAACTTTCGGAAACGATTAAGGCACACGGAGTCATTCAGCCGATCGTAGTAAAACAGTTAGATTCT
GGTTACGAAATCATTTCTGGGGAACGTCGTTATCGAGCTTGTAAACTTGCTGGCTTTATTAAAATTCCTGCAATCGTCAA
AAATGTTTCCGAAAACCAATCTATGGAAATGGCGATCATTGAAAACATTCAAAGAGAAGATCTAAATCCAATCGAAGAAG
CGATCGCTTACAAAACTCTTTCTGAAAAATTAAATTTAAAGATCACTGATATTTCCGCTCGCGTTGGAAAAAATCGTTCT
ACAATTTCTAATTTAATTCGTCTTCTTCAACTTCCAGATGTAGTTCAAGACCTGATTAAAAACGGTAGAATTTCGGAAGG
ACATGCAAGGCCACTTTTGTCTTTAGCGGATCGAAAAAAAATAGAACAACTTGCTTATCAAATTGCGGAGAAAGGTTTAA
CTGCAAGACAGGTTGAAGAATTAGTTTCTAATATTTCGGAAGGACGTTCCTCTATTCCGGAAAAGAAAAGATCCCGTAAA
GACGTAAACATAGTCGAACTAGAAAACAAATTTAGAAAAAAATATTCTATGAAAATTGAAATCGGTCATAATCAAAATTC
CGGTAAAGGTAAAATGACGATTGTTTATCCGAACTTGGAAGCGATGGAAAAGATTTTAAACGCTTTGGGTTTGTAA

Upstream 100 bases:

>100_bases
CTCCTTCTTTTGGGCAAACAATTCTAAGTTATGATCCAGAAGGAGTAGGTGCTCAAAGTTATAGAAGCCTCGCTCTGGAA
GTTGCAGGGAAGAATTAAAA

Downstream 100 bases:

>100_bases
GAATGAAAGATTCTGAATTGGATGAAACAAAAATCATCTTATAGAAAGGGTAGATAAAGTTTTGCTGGATTATTTATTTC
CTATTTTAAGTTTTATTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MALKPKALGRGLGNLIPVNESKTPIDSSSEGALREIKISEIRPNPGQPRKTFSEESLKELSETIKAHGVIQPIVVKQLDS
GYEIISGERRYRACKLAGFIKIPAIVKNVSENQSMEMAIIENIQREDLNPIEEAIAYKTLSEKLNLKITDISARVGKNRS
TISNLIRLLQLPDVVQDLIKNGRISEGHARPLLSLADRKKIEQLAYQIAEKGLTARQVEELVSNISEGRSSIPEKKRSRK
DVNIVELENKFRKKYSMKIEIGHNQNSGKGKMTIVYPNLEAMEKILNALGL

Sequences:

>Translated_291_residues
MALKPKALGRGLGNLIPVNESKTPIDSSSEGALREIKISEIRPNPGQPRKTFSEESLKELSETIKAHGVIQPIVVKQLDS
GYEIISGERRYRACKLAGFIKIPAIVKNVSENQSMEMAIIENIQREDLNPIEEAIAYKTLSEKLNLKITDISARVGKNRS
TISNLIRLLQLPDVVQDLIKNGRISEGHARPLLSLADRKKIEQLAYQIAEKGLTARQVEELVSNISEGRSSIPEKKRSRK
DVNIVELENKFRKKYSMKIEIGHNQNSGKGKMTIVYPNLEAMEKILNALGL
>Mature_290_residues
ALKPKALGRGLGNLIPVNESKTPIDSSSEGALREIKISEIRPNPGQPRKTFSEESLKELSETIKAHGVIQPIVVKQLDSG
YEIISGERRYRACKLAGFIKIPAIVKNVSENQSMEMAIIENIQREDLNPIEEAIAYKTLSEKLNLKITDISARVGKNRST
ISNLIRLLQLPDVVQDLIKNGRISEGHARPLLSLADRKKIEQLAYQIAEKGLTARQVEELVSNISEGRSSIPEKKRSRKD
VNIVELENKFRKKYSMKIEIGHNQNSGKGKMTIVYPNLEAMEKILNALGL

Specific function: Required for the initiation of sporulation and for normal chromosome segregation. Antagonizes sporulation inhibition of soj. It probably interacts with a specific DNA site and other proteins involved in partitioning and cell division, and antagonizes soj

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 32512; Mature: 32381

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALKPKALGRGLGNLIPVNESKTPIDSSSEGALREIKISEIRPNPGQPRKTFSEESLKEL
CCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHEEEHHCCCCCCCCCHHHHHHHHHHHH
SETIKAHGVIQPIVVKQLDSGYEIISGERRYRACKLAGFIKIPAIVKNVSENQSMEMAII
HHHHHHCCCHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
ENIQREDLNPIEEAIAYKTLSEKLNLKITDISARVGKNRSTISNLIRLLQLPDVVQDLIK
HHHHHCCCCHHHHHHHHHHHHHHHCEEEEEHHHHHCCCHHHHHHHHHHHHCHHHHHHHHH
NGRISEGHARPLLSLADRKKIEQLAYQIAEKGLTARQVEELVSNISEGRSSIPEKKRSRK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHCC
DVNIVELENKFRKKYSMKIEIGHNQNSGKGKMTIVYPNLEAMEKILNALGL
CCCEEHHHHHHHHHHEEEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHCC
>Mature Secondary Structure 
ALKPKALGRGLGNLIPVNESKTPIDSSSEGALREIKISEIRPNPGQPRKTFSEESLKEL
CCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHEEEHHCCCCCCCCCHHHHHHHHHHHH
SETIKAHGVIQPIVVKQLDSGYEIISGERRYRACKLAGFIKIPAIVKNVSENQSMEMAII
HHHHHHCCCHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
ENIQREDLNPIEEAIAYKTLSEKLNLKITDISARVGKNRSTISNLIRLLQLPDVVQDLIK
HHHHHCCCCHHHHHHHHHHHHHHHCEEEEEHHHHHCCCHHHHHHHHHHHHCHHHHHHHHH
NGRISEGHARPLLSLADRKKIEQLAYQIAEKGLTARQVEELVSNISEGRSSIPEKKRSRK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHCC
DVNIVELENKFRKKYSMKIEIGHNQNSGKGKMTIVYPNLEAMEKILNALGL
CCCEEHHHHHHHHHHEEEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 1552862; 9384377; 1900505; 8071208 [H]