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The map label for this gene is 45659249

Identifier: 45659249

GI number: 45659249

Start: 4208908

End: 4209990

Strand: Direct

Name: 45659249

Synonym: LIC13432

Alternate gene names: NA

Gene position: 4208908-4209990 (Clockwise)

Preceding gene: 45659248

Following gene: 45659250

Centisome position: 98.4

GC content: 35.36

Gene sequence:

>1083_bases
ATGAAACAGATATTTCAACTCGTAAACATTCAACTTAAAGAATTTTATAGAGAACCTGCGATTCTTTTTTGGGCCTTCGT
ATTTCCGATCGCAATGGCTGGAGTTCTAGGGATTGCGTTTAAAAACCGAGGTTCAGAAGAAGTAAAAATTGCAATATTAG
AAAATTCTTATCAACTCGATGAATTCAAAAAAATTCTAAATTCGGATCCATTAGAAAACACGATAAATCAAGAAGAAAAA
GTAAACTCCAAATCCTTTTCGTTTCCATCTCTCAATTTTTTGATTCTTTCTAAAGAAGAAGCGATTCGAAATCTTAAACA
AGGAAAACTTAACGTAATTATAGAAAGAACAAAAGATCGAAAAATTCATTTCTCTTTTGATTCAGACAATCCAAACGGCC
AAAGAGATTATCTTTTGATCTTGGCAAAAATGCGTTCTCATAAAACTGATTTTGAGTCGGTAGTAGATCGTTTGGATTCG
AAGGGAACAAGATACATAGATTATTTGATTCCCGGAATGCTTGCGATGGGCGTAATGAACTCCTGTCTTTGGGGAGTTGG
TTGGAATCTGATCGAAATGAGAATGAAAAAACTTTTACGAAGAATGTCCGCAACACCAATGAATCGGTTATATTTTCTTC
TATCCTTCTTTTTTACCAGATTGATCGTAACCGTGGTAGAATCGGCAATTTTACTTGGTTTTACCCAATACACGTTTGAA
AACTCGATGGAGGGCTCCATCGGAGTTGCACTTGCGGTTTATCTTTCTGGAAATTTTGCGTTCGTTTGTATCGGAATTTT
CATTGGTTCAAGAGCAGCCAGTTCTCAAGTAGGAAATGGACTGATCAACGCAGTAACATTTCCAATGATGGTGCTTTCGG
GAGTTTTTTTCTCCTATCAAAATTTTCCAGAAATATTACTTCCAATTATTCGAAATCTTCCTTTGACCATGATGGCAGAT
TCCTTAAGGGCTGTTTTTATTGAAGGCGTGGAGTTAAGTTCGGTAATTCCTACTTTGATTTCGTTGTTTTTATATGGAAT
TGTCTTTCTTTTTATAGGAAATAAAATTTTTCGCTGGTCTTGA

Upstream 100 bases:

>100_bases
AGACAATTTCCACATCTGGAAAAAAATTAAATACTTTAGAATGTCATAGAAAAACGTTAAACGACATTTTTCTAAGTATG
ACAGGAAGAGGATTAGAAGA

Downstream 100 bases:

>100_bases
TCAATAGAAATAAAATAGTTTTAGAGATGTTTTTACCTCACTTAAGACAAAGTGCATATTCGGTTTTTCTAAAGCCGTTT
TTTCTCTCCTTAGATCCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: ABC Transporter Permease Protein; ABC Transporter Permease; Multidrug ABC Transporter Permease; ABC-Type Transporter Permease Protein; ABC Multidrug Efflux Pump Inner Membrane Subunit; ABC-2 Type Transporter Family; Abc Transporter Permease Protein Abc-2 Family; ABC-Type Multidrug Transport System Permease Protein; Multidrug ABC Transporter Permease Component; Abc-2 Type Transporter; ABC Transporter Permease Component

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MKQIFQLVNIQLKEFYREPAILFWAFVFPIAMAGVLGIAFKNRGSEEVKIAILENSYQLDEFKKILNSDPLENTINQEEK
VNSKSFSFPSLNFLILSKEEAIRNLKQGKLNVIIERTKDRKIHFSFDSDNPNGQRDYLLILAKMRSHKTDFESVVDRLDS
KGTRYIDYLIPGMLAMGVMNSCLWGVGWNLIEMRMKKLLRRMSATPMNRLYFLLSFFFTRLIVTVVESAILLGFTQYTFE
NSMEGSIGVALAVYLSGNFAFVCIGIFIGSRAASSQVGNGLINAVTFPMMVLSGVFFSYQNFPEILLPIIRNLPLTMMAD
SLRAVFIEGVELSSVIPTLISLFLYGIVFLFIGNKIFRWS

Sequences:

>Translated_360_residues
MKQIFQLVNIQLKEFYREPAILFWAFVFPIAMAGVLGIAFKNRGSEEVKIAILENSYQLDEFKKILNSDPLENTINQEEK
VNSKSFSFPSLNFLILSKEEAIRNLKQGKLNVIIERTKDRKIHFSFDSDNPNGQRDYLLILAKMRSHKTDFESVVDRLDS
KGTRYIDYLIPGMLAMGVMNSCLWGVGWNLIEMRMKKLLRRMSATPMNRLYFLLSFFFTRLIVTVVESAILLGFTQYTFE
NSMEGSIGVALAVYLSGNFAFVCIGIFIGSRAASSQVGNGLINAVTFPMMVLSGVFFSYQNFPEILLPIIRNLPLTMMAD
SLRAVFIEGVELSSVIPTLISLFLYGIVFLFIGNKIFRWS
>Mature_360_residues
MKQIFQLVNIQLKEFYREPAILFWAFVFPIAMAGVLGIAFKNRGSEEVKIAILENSYQLDEFKKILNSDPLENTINQEEK
VNSKSFSFPSLNFLILSKEEAIRNLKQGKLNVIIERTKDRKIHFSFDSDNPNGQRDYLLILAKMRSHKTDFESVVDRLDS
KGTRYIDYLIPGMLAMGVMNSCLWGVGWNLIEMRMKKLLRRMSATPMNRLYFLLSFFFTRLIVTVVESAILLGFTQYTFE
NSMEGSIGVALAVYLSGNFAFVCIGIFIGSRAASSQVGNGLINAVTFPMMVLSGVFFSYQNFPEILLPIIRNLPLTMMAD
SLRAVFIEGVELSSVIPTLISLFLYGIVFLFIGNKIFRWS

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40982; Mature: 40982

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQIFQLVNIQLKEFYREPAILFWAFVFPIAMAGVLGIAFKNRGSEEVKIAILENSYQLD
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHH
EFKKILNSDPLENTINQEEKVNSKSFSFPSLNFLILSKEEAIRNLKQGKLNVIIERTKDR
HHHHHHCCCCCHHHCCHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHCCCEEEEEEECCCC
KIHFSFDSDNPNGQRDYLLILAKMRSHKTDFESVVDRLDSKGTRYIDYLIPGMLAMGVMN
EEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
SCLWGVGWNLIEMRMKKLLRRMSATPMNRLYFLLSFFFTRLIVTVVESAILLGFTQYTFE
HHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NSMEGSIGVALAVYLSGNFAFVCIGIFIGSRAASSQVGNGLINAVTFPMMVLSGVFFSYQ
CCCCCCHHEEEEEEECCCHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHC
NFPEILLPIIRNLPLTMMADSLRAVFIEGVELSSVIPTLISLFLYGIVFLFIGNKIFRWS
CCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKQIFQLVNIQLKEFYREPAILFWAFVFPIAMAGVLGIAFKNRGSEEVKIAILENSYQLD
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHH
EFKKILNSDPLENTINQEEKVNSKSFSFPSLNFLILSKEEAIRNLKQGKLNVIIERTKDR
HHHHHHCCCCCHHHCCHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHCCCEEEEEEECCCC
KIHFSFDSDNPNGQRDYLLILAKMRSHKTDFESVVDRLDSKGTRYIDYLIPGMLAMGVMN
EEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
SCLWGVGWNLIEMRMKKLLRRMSATPMNRLYFLLSFFFTRLIVTVVESAILLGFTQYTFE
HHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NSMEGSIGVALAVYLSGNFAFVCIGIFIGSRAASSQVGNGLINAVTFPMMVLSGVFFSYQ
CCCCCCHHEEEEEEECCCHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHC
NFPEILLPIIRNLPLTMMADSLRAVFIEGVELSSVIPTLISLFLYGIVFLFIGNKIFRWS
CCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA