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The map label for this gene is rfbU [H]

Identifier: 45659223

GI number: 45659223

Start: 4176543

End: 4177754

Strand: Direct

Name: rfbU [H]

Synonym: LIC13406

Alternate gene names: 45659223

Gene position: 4176543-4177754 (Clockwise)

Preceding gene: 45659215

Following gene: 45659227

Centisome position: 97.65

GC content: 32.26

Gene sequence:

>1212_bases
ATGGGAATACAAAATCAGAAAGAAAAAACAAACCGCGATTTTAGAATTGGATTAGACGCCCGTATGATCTCTCATTCCGG
CATTGGAATGAGAATTAGAGGACTTCTGAAATATCTAGGTCCCATCGCTAAAAAGGAAAAAATTCAAATCTATCTTTTTG
GTGATCTAAAAACGATTCAAAACGAAGGAATTTCATGTCATGAATTTTCTGGTTTTGAACAAGATCAAAACCCCATTACA
ACCAAAAATAAATCTATTCGAAAAACAAAAGATTTCTCCTATCCTGTAATTTCATATCTCGCTCCGATTTATTCCCTTTC
CGAATTTTTAGGTCATCCTTGGATGGAAAGAATGGATCTTTTAGACATTCCTCATTTTAACGCGCCTCTTCCTTATCTGA
ATAAATCAATCGTAACAATTCATGATATTATTCCTTTTCGAATGAAGGAATTTCATTCAAATTTCGTAAAACGAATTTAT
ATGCAAATTGTATTTCGTTTAATTCGATCGTTTTCAAAAAAGGTGGTGTCCGTTTCCGAACACACCACAATGGATTTAAA
ATCTGTATTCGGTTTTTCTAAAGATAAAATGAAACTGATTTATAATGGTATAGACCATTCCGTTTTTTATCCGGCAACTT
CTACTGAAAAAAAGAATTTTTTAAAAAAATATAATCTCAAAGAAGGTTATTTATTGAGTGTCGGAATCGGTAAAGGTCAC
AAAAATTTAAACTTAGTTTTAGACGTTTTAAAATCTCTTTGGAATTCCAAAATTTTAAAAACCAAATGGACATTAGGTGG
TGCGTCTGGAAAAATTCCAGATTATTTACAATCATTTGTAACTGGTTATGAAGACCAAATAGTCCCCATGAAAAAGTTAC
CTTTGGAAGAACTTCGTTGTCTTTATTCTTGTGCGGATCTTTTTATCTTTCCTTCAAAATACGAAGGTTTTGGATTTCCT
CCTCTCGAAGCACAAGCTTGCGGTTGTCCGGTAATCTCTTCTAACTCGACCGTAATGCCTGAAATTTTACAAAACAGCGT
GTTTTACTTTTCTCCTGAAAACCCAGCTGAATTGGAAAATCTTCTAAAAGATTTTTTAAAAAATCGAAATTCCATAAAAA
AAATGATCCCGAAAGGTAAGAAAAACTCTACAAGATTTTCTTGGGAAAAAGCGACTTTCGAAACTTTAGAAGTTTATAAA
AATCTTTTATAA

Upstream 100 bases:

>100_bases
ACCTTTTTCAAGAATCCCCATTTTGAAAAGTATCTTCCGAATCTTCCATCGTATTTTCATTTTCTTGCAGATTTCCAGCA
AAGAGAAGTAATGTCCGATC

Downstream 100 bases:

>100_bases
CAATTTTTACATAAGTTTTTGTATTTAAAAATTTTGACAGACTTTAAGCAGTTCATAAATTCCAGACAAAAATGAATAAT
CACTATATCCAAATGGTTTT

Product: mannosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 402

Protein sequence:

>403_residues
MGIQNQKEKTNRDFRIGLDARMISHSGIGMRIRGLLKYLGPIAKKEKIQIYLFGDLKTIQNEGISCHEFSGFEQDQNPIT
TKNKSIRKTKDFSYPVISYLAPIYSLSEFLGHPWMERMDLLDIPHFNAPLPYLNKSIVTIHDIIPFRMKEFHSNFVKRIY
MQIVFRLIRSFSKKVVSVSEHTTMDLKSVFGFSKDKMKLIYNGIDHSVFYPATSTEKKNFLKKYNLKEGYLLSVGIGKGH
KNLNLVLDVLKSLWNSKILKTKWTLGGASGKIPDYLQSFVTGYEDQIVPMKKLPLEELRCLYSCADLFIFPSKYEGFGFP
PLEAQACGCPVISSNSTVMPEILQNSVFYFSPENPAELENLLKDFLKNRNSIKKMIPKGKKNSTRFSWEKATFETLEVYK
NLL

Sequences:

>Translated_403_residues
MGIQNQKEKTNRDFRIGLDARMISHSGIGMRIRGLLKYLGPIAKKEKIQIYLFGDLKTIQNEGISCHEFSGFEQDQNPIT
TKNKSIRKTKDFSYPVISYLAPIYSLSEFLGHPWMERMDLLDIPHFNAPLPYLNKSIVTIHDIIPFRMKEFHSNFVKRIY
MQIVFRLIRSFSKKVVSVSEHTTMDLKSVFGFSKDKMKLIYNGIDHSVFYPATSTEKKNFLKKYNLKEGYLLSVGIGKGH
KNLNLVLDVLKSLWNSKILKTKWTLGGASGKIPDYLQSFVTGYEDQIVPMKKLPLEELRCLYSCADLFIFPSKYEGFGFP
PLEAQACGCPVISSNSTVMPEILQNSVFYFSPENPAELENLLKDFLKNRNSIKKMIPKGKKNSTRFSWEKATFETLEVYK
NLL
>Mature_402_residues
GIQNQKEKTNRDFRIGLDARMISHSGIGMRIRGLLKYLGPIAKKEKIQIYLFGDLKTIQNEGISCHEFSGFEQDQNPITT
KNKSIRKTKDFSYPVISYLAPIYSLSEFLGHPWMERMDLLDIPHFNAPLPYLNKSIVTIHDIIPFRMKEFHSNFVKRIYM
QIVFRLIRSFSKKVVSVSEHTTMDLKSVFGFSKDKMKLIYNGIDHSVFYPATSTEKKNFLKKYNLKEGYLLSVGIGKGHK
NLNLVLDVLKSLWNSKILKTKWTLGGASGKIPDYLQSFVTGYEDQIVPMKKLPLEELRCLYSCADLFIFPSKYEGFGFPP
LEAQACGCPVISSNSTVMPEILQNSVFYFSPENPAELENLLKDFLKNRNSIKKMIPKGKKNSTRFSWEKATFETLEVYKN
LL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 46387; Mature: 46256

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIQNQKEKTNRDFRIGLDARMISHSGIGMRIRGLLKYLGPIAKKEKIQIYLFGDLKTIQ
CCCCCCCHHCCCCEEECCHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECHHHHH
NEGISCHEFSGFEQDQNPITTKNKSIRKTKDFSYPVISYLAPIYSLSEFLGHPWMERMDL
CCCCCEEECCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH
LDIPHFNAPLPYLNKSIVTIHDIIPFRMKEFHSNFVKRIYMQIVFRLIRSFSKKVVSVSE
HCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HTTMDLKSVFGFSKDKMKLIYNGIDHSVFYPATSTEKKNFLKKYNLKEGYLLSVGIGKGH
HHHHHHHHHHCCCCCCHHHHHCCCCCCEECCCCCCHHHHHHHHCCCCCCEEEEEECCCCC
KNLNLVLDVLKSLWNSKILKTKWTLGGASGKIPDYLQSFVTGYEDQIVPMKKLPLEELRC
CHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCHHCCCHHHHHH
LYSCADLFIFPSKYEGFGFPPLEAQACGCPVISSNSTVMPEILQNSVFYFSPENPAELEN
HHHHHHHEEECCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHCCEEEECCCCHHHHHH
LLKDFLKNRNSIKKMIPKGKKNSTRFSWEKATFETLEVYKNLL
HHHHHHHCHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GIQNQKEKTNRDFRIGLDARMISHSGIGMRIRGLLKYLGPIAKKEKIQIYLFGDLKTIQ
CCCCCCHHCCCCEEECCHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECHHHHH
NEGISCHEFSGFEQDQNPITTKNKSIRKTKDFSYPVISYLAPIYSLSEFLGHPWMERMDL
CCCCCEEECCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH
LDIPHFNAPLPYLNKSIVTIHDIIPFRMKEFHSNFVKRIYMQIVFRLIRSFSKKVVSVSE
HCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HTTMDLKSVFGFSKDKMKLIYNGIDHSVFYPATSTEKKNFLKKYNLKEGYLLSVGIGKGH
HHHHHHHHHHCCCCCCHHHHHCCCCCCEECCCCCCHHHHHHHHCCCCCCEEEEEECCCCC
KNLNLVLDVLKSLWNSKILKTKWTLGGASGKIPDYLQSFVTGYEDQIVPMKKLPLEELRC
CHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCHHCCCHHHHHH
LYSCADLFIFPSKYEGFGFPPLEAQACGCPVISSNSTVMPEILQNSVFYFSPENPAELEN
HHHHHHHEEECCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHCCEEEECCCCHHHHHH
LLKDFLKNRNSIKKMIPKGKKNSTRFSWEKATFETLEVYKNLL
HHHHHHHCHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]