| Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_005823 |
| Length | 4,277,185 |
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The map label for this gene is 45659168
Identifier: 45659168
GI number: 45659168
Start: 4106944
End: 4107423
Strand: Direct
Name: 45659168
Synonym: LIC13349
Alternate gene names: NA
Gene position: 4106944-4107423 (Clockwise)
Preceding gene: 45659167
Following gene: 45659169
Centisome position: 96.02
GC content: 37.29
Gene sequence:
>480_bases GTGATTTTAAAATGTATCGGCTGCTCGGATTCGAATGAACAGCCGATACCAATTCGAACACTTCCAGTTCCGAAAAATCT TCTCGATACTCGATGTAACTTACCAGAGATACATATAAGAAGTTTTAACAAAGCTCCGAATCAACACGAAAAACTAAATA ACGAGCATGGAAAAAGAATTACAAAAGCAACCATAGATTGTAAAAACTTTCCAATCAAAATCACGGCACAATATCCTTCT TATGAAGAGCAATTTTTGATGGTTAACTATGGGAAAAAAACGATTAAGTTAGTTCAAGACCCAGGAGATGCCTGGGGCGG AGGATATTTAAATTTTTTAGGCGTCGATGATCGGTTTGTGTATTATAGCATTACTGGAGTTAGTCTTTCGGGTGGCGTAG TTCTAACTTACTATTGTTTCAACTGGAGAAACGGAGAAGAGTATTTTTTTGATTCCGATACCTGCAATAGCTCCCCATAA
Upstream 100 bases:
>100_bases CGCAATTTCAGAATACGCAATGAGCGTAATCGAGGATTGACCTCGCATTGCGTAATGGTTTCATCATTTTCGTTGCCGCT CTTTCATCGTTTTTGTTGTC
Downstream 100 bases:
>100_bases AATGGATCAGAATTTTCAAAAATCAAAATGTACCTCACTGGCGCAAGTCGATTCGAAATTCTAATCTCAATTTATAAGGA TCTTGTAAACAGTAGAATTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MILKCIGCSDSNEQPIPIRTLPVPKNLLDTRCNLPEIHIRSFNKAPNQHEKLNNEHGKRITKATIDCKNFPIKITAQYPS YEEQFLMVNYGKKTIKLVQDPGDAWGGGYLNFLGVDDRFVYYSITGVSLSGGVVLTYYCFNWRNGEEYFFDSDTCNSSP
Sequences:
>Translated_159_residues MILKCIGCSDSNEQPIPIRTLPVPKNLLDTRCNLPEIHIRSFNKAPNQHEKLNNEHGKRITKATIDCKNFPIKITAQYPS YEEQFLMVNYGKKTIKLVQDPGDAWGGGYLNFLGVDDRFVYYSITGVSLSGGVVLTYYCFNWRNGEEYFFDSDTCNSSP >Mature_159_residues MILKCIGCSDSNEQPIPIRTLPVPKNLLDTRCNLPEIHIRSFNKAPNQHEKLNNEHGKRITKATIDCKNFPIKITAQYPS YEEQFLMVNYGKKTIKLVQDPGDAWGGGYLNFLGVDDRFVYYSITGVSLSGGVVLTYYCFNWRNGEEYFFDSDTCNSSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18099; Mature: 18099
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILKCIGCSDSNEQPIPIRTLPVPKNLLDTRCNLPEIHIRSFNKAPNQHEKLNNEHGKRI CEEEEECCCCCCCCCCCEEECCCCHHHHHHCCCCCEEEEECCCCCCCHHHHCCCCCCCEE TKATIDCKNFPIKITAQYPSYEEQFLMVNYGKKTIKLVQDPGDAWGGGYLNFLGVDDRFV EEEEEECCCCCEEEEECCCCCCCEEEEEECCCEEEEEEECCCCCCCCCEEEEEECCCEEE YYSITGVSLSGGVVLTYYCFNWRNGEEYFFDSDTCNSSP EEEEEEEEECCCEEEEEEEEEEECCCEEEEECCCCCCCC >Mature Secondary Structure MILKCIGCSDSNEQPIPIRTLPVPKNLLDTRCNLPEIHIRSFNKAPNQHEKLNNEHGKRI CEEEEECCCCCCCCCCCEEECCCCHHHHHHCCCCCEEEEECCCCCCCHHHHCCCCCCCEE TKATIDCKNFPIKITAQYPSYEEQFLMVNYGKKTIKLVQDPGDAWGGGYLNFLGVDDRFV EEEEEECCCCCEEEEECCCCCCCEEEEEECCCEEEEEEECCCCCCCCCEEEEEECCCEEE YYSITGVSLSGGVVLTYYCFNWRNGEEYFFDSDTCNSSP EEEEEEEEECCCEEEEEEEEEEECCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA