| Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_005823 |
| Length | 4,277,185 |
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The map label for this gene is 45659121
Identifier: 45659121
GI number: 45659121
Start: 4049545
End: 4049982
Strand: Direct
Name: 45659121
Synonym: LIC13302
Alternate gene names: NA
Gene position: 4049545-4049982 (Clockwise)
Preceding gene: 45659120
Following gene: 45659124
Centisome position: 94.68
GC content: 35.16
Gene sequence:
>438_bases ATGAGTTTAAAGACTGCGAAAGATTGGAATCAATTTCTTTTAAGATTATTTATCGCTTTCGGCTTTTGGGAAGTGATCTC TGTACCTCTTCGTAGTCTTTTATTTTCTCGTTTTTACTACGACCCTACTTATAAAAATTTTTTCCAATCTGTGGGAATGA TCTTATGGGTAGGGCCTATCGTAGCCGATCTGATCCAAGTTTTCTTTTTAGGAATGATCATCCGACTTGCAAAAGATTCT TTACCGACCGGAATCGTAGGTGGTTTGATCATTGCAATTTGTTTTTCTTTAGCGGCTTACGTCGGACCTGCTATTTCTAT ATTAAACTTTGTGAATGTTTTACCTAACTTAATCGTTTGGCTTTGGGTATTCTCGCAATTCTTATTGACTTTGATTTCTT CTTTGATATTGACTTATTCTTCCGATGAAGAATTTTAA
Upstream 100 bases:
>100_bases CCGCTGGAGATTACCAAGTAGAAGGCGCTAAGAATGGACTGATGCTGAATATCGGCGGGTCCGCAACGACTAACGTGGTT TTCATCGTAGGAAAATAAAA
Downstream 100 bases:
>100_bases ACCGGAGAATCTTTTTTTCGTTTTAAAGTTAGGAAGATAAATTCCGATCAAAACTTCCAGTGATTCATAACAGAATGTGA ATATGTAATAAAGTTTGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MSLKTAKDWNQFLLRLFIAFGFWEVISVPLRSLLFSRFYYDPTYKNFFQSVGMILWVGPIVADLIQVFFLGMIIRLAKDS LPTGIVGGLIIAICFSLAAYVGPAISILNFVNVLPNLIVWLWVFSQFLLTLISSLILTYSSDEEF
Sequences:
>Translated_145_residues MSLKTAKDWNQFLLRLFIAFGFWEVISVPLRSLLFSRFYYDPTYKNFFQSVGMILWVGPIVADLIQVFFLGMIIRLAKDS LPTGIVGGLIIAICFSLAAYVGPAISILNFVNVLPNLIVWLWVFSQFLLTLISSLILTYSSDEEF >Mature_144_residues SLKTAKDWNQFLLRLFIAFGFWEVISVPLRSLLFSRFYYDPTYKNFFQSVGMILWVGPIVADLIQVFFLGMIIRLAKDSL PTGIVGGLIIAICFSLAAYVGPAISILNFVNVLPNLIVWLWVFSQFLLTLISSLILTYSSDEEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16501; Mature: 16370
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKTAKDWNQFLLRLFIAFGFWEVISVPLRSLLFSRFYYDPTYKNFFQSVGMILWVGPI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH VADLIQVFFLGMIIRLAKDSLPTGIVGGLIIAICFSLAAYVGPAISILNFVNVLPNLIVW HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWVFSQFLLTLISSLILTYSSDEEF HHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SLKTAKDWNQFLLRLFIAFGFWEVISVPLRSLLFSRFYYDPTYKNFFQSVGMILWVGPI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH VADLIQVFFLGMIIRLAKDSLPTGIVGGLIIAICFSLAAYVGPAISILNFVNVLPNLIVW HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWVFSQFLLTLISSLILTYSSDEEF HHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA