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The map label for this gene is ycaL [C]

Identifier: 45659114

GI number: 45659114

Start: 4037281

End: 4039260

Strand: Direct

Name: ycaL [C]

Synonym: LIC13293

Alternate gene names: 45659114

Gene position: 4037281-4039260 (Clockwise)

Preceding gene: 45659113

Following gene: 45659115

Centisome position: 94.39

GC content: 34.9

Gene sequence:

>1980_bases
ATGCAAAGGTTTTTCAAATTCATCCTTTTCGCTGGAACATTATCAATTTATTTTCCTATCAACGCTCAAAAAAATAATAC
GATTGATTTCGACGCCGAGTTGTATGCTCAAATCGTTCGTCAAAGCGCCTATCAATACGGAACAATTCTTAAATCTAGAA
AAGTTCTCAAAGATCATAATCACTGGAAAAAACCCATCGATTCGGCGTTCCGTAAATTGGCTGATTCTTCAGGAAATCCT
ACTTTTCCGATCGTTTATAATTTAATTCAAGACAACTCTTTTAACGCTTTCGCTATGGCGGGCGGACAGTTCTGTATCAA
TTCAGGCACTTTAGATATTTTAGACCAAGTAATTGCAAACTCAGAACCAGACGTAAAAGATAAACTGAATTTTTATAGAG
AAAGATATATTGCGGGCGTTTTGTCTCACGAACTTTCGCATTATTATAACAAACACACTTTTAATTCCGTAAAAAAATTC
TATCAATTGAAGGGAAATCCAACCGGAGAAGTTATATTAGAAAATATTAAATTCTCCCAGGATCAGGAAGTAGACGCAGA
TCAAACCGGATTTCAACTTTTAAACAAAGCGGGTTATGGTGGCGAATATATGATTCGTACCTTGGAATTGATGAGCGATA
TAGATAATCAATATAAAGAATATATCGCGAAAAAAAAATTAGATAAAACCAGTCCAGAATCTATGACTTCTTTGTATTTT
ACGAGTCATCCTTCTCCAAACGATAGACTTTCTAGATTCAATAGCGACAAACAAGAACTCTATTCTTTACTTGCTACATT
GGAAAAAACCTTTGATGATATTCAATTCGGTAAAAATCTAGATCTGGCTAAATCTAATTTAGAAAAGGCACTTTCTAAAT
TTCCTGGTAATACTCATTTAGAAAAATCTTATGCAATTTGTCTTCATAAAATTTGGATGTCAACCGCAAGCAACGAAGAT
TTAAAAATTAAACCGGTTATCGATATGCCTTCTTTTCGGGATTCAATGTTATTTCCAGGCGGACTTCGCAAAAGGGTCGT
TATGCGAACAACCCCTGGCAATCAAGCCGCTTATACAAAAGCGAAAGAAGCTTATCAAAAGGTAATTATAAAAACAGAAG
ACCCCTACTTTATTTCAAACTATGCAGTCCTTCTTGCTTATTCCACTGAAGAAAACGACATGAACGTCGCAAAGTCTCTT
GCAGGAAGCACTGTAAGAGCTGAAAATTCTATTCCTCTGGCAAACAATTTCGGCGTGGTTTTGTATTGGACCAACGATGA
GGAAAAGGCCATGGAAATTTTCAAATCGGTCGCAAACATGGTAGATAAAAGAGTACAAAATTTCAGTGAAAAATCTAAAT
CGAGTCCCGACGTTCAGGCTTACTTACAAGGAATCGGAAATTCAATTCATCAAAAAATACAATTAGATCCGGATTATGTT
TACGAAAACTTTACTCCTATTTTAAATTACGTTCTTTTAGAATCTTACAAAGAAAAAACTCCGAAAACGAAACAATTAGC
TTCATATTATTTAGAAAATTATGATTCTTTTTCTGGTTGGGCTAAATATCTCGCAAATCTTCAAGGAATCGATCTACCAG
AACCATCGCAAAATACAAAACAAAATGTTTTCAAGATTGGTGGGGTTGGCCCTGGTGATAAACTAGAAGATCTACTAAAA
TTATGGGGGCAACCGGATAAGATCCAAATCGATAAATCTTCCGGAAATGAATTTTATATTTATAGTAACAAAGAAACTTC
CTTTTTATTAAATATTGGTTCGGTTCTTCAAGTCAATGCGTATGGAGACAATAGTCCTGGTATCGACAAGGGTGTGGTTA
TTGGTTCAGATCGAGGAACCGCCGAAAAAGTTTTCGGTAAACAATTCCAAAAAAGTGGACCGTATTTTGGATATTCTCAA
AACGGAAACACATTTGTTAAATACAGAAAGAATAAAGTTGATCAGATCATTCTTCAATAG

Upstream 100 bases:

>100_bases
TTCTATGAAAAAAAATAGAATTGAATCAAGCTTGACAATGAAATTTTTTTAATCATCTTATATTATCCCAATCGATATTT
TTTTTAAAGGTTGCAACAAA

Downstream 100 bases:

>100_bases
TTATTGATAGTTTTTACTATTCGGACGTATAAAAATGGTATTGAAAGTTGGTTCGTACCATTTGTTTTTTTCCGAAACTC
ATAGATGCAAGATTCCTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 659; Mature: 659

Protein sequence:

>659_residues
MQRFFKFILFAGTLSIYFPINAQKNNTIDFDAELYAQIVRQSAYQYGTILKSRKVLKDHNHWKKPIDSAFRKLADSSGNP
TFPIVYNLIQDNSFNAFAMAGGQFCINSGTLDILDQVIANSEPDVKDKLNFYRERYIAGVLSHELSHYYNKHTFNSVKKF
YQLKGNPTGEVILENIKFSQDQEVDADQTGFQLLNKAGYGGEYMIRTLELMSDIDNQYKEYIAKKKLDKTSPESMTSLYF
TSHPSPNDRLSRFNSDKQELYSLLATLEKTFDDIQFGKNLDLAKSNLEKALSKFPGNTHLEKSYAICLHKIWMSTASNED
LKIKPVIDMPSFRDSMLFPGGLRKRVVMRTTPGNQAAYTKAKEAYQKVIIKTEDPYFISNYAVLLAYSTEENDMNVAKSL
AGSTVRAENSIPLANNFGVVLYWTNDEEKAMEIFKSVANMVDKRVQNFSEKSKSSPDVQAYLQGIGNSIHQKIQLDPDYV
YENFTPILNYVLLESYKEKTPKTKQLASYYLENYDSFSGWAKYLANLQGIDLPEPSQNTKQNVFKIGGVGPGDKLEDLLK
LWGQPDKIQIDKSSGNEFYIYSNKETSFLLNIGSVLQVNAYGDNSPGIDKGVVIGSDRGTAEKVFGKQFQKSGPYFGYSQ
NGNTFVKYRKNKVDQIILQ

Sequences:

>Translated_659_residues
MQRFFKFILFAGTLSIYFPINAQKNNTIDFDAELYAQIVRQSAYQYGTILKSRKVLKDHNHWKKPIDSAFRKLADSSGNP
TFPIVYNLIQDNSFNAFAMAGGQFCINSGTLDILDQVIANSEPDVKDKLNFYRERYIAGVLSHELSHYYNKHTFNSVKKF
YQLKGNPTGEVILENIKFSQDQEVDADQTGFQLLNKAGYGGEYMIRTLELMSDIDNQYKEYIAKKKLDKTSPESMTSLYF
TSHPSPNDRLSRFNSDKQELYSLLATLEKTFDDIQFGKNLDLAKSNLEKALSKFPGNTHLEKSYAICLHKIWMSTASNED
LKIKPVIDMPSFRDSMLFPGGLRKRVVMRTTPGNQAAYTKAKEAYQKVIIKTEDPYFISNYAVLLAYSTEENDMNVAKSL
AGSTVRAENSIPLANNFGVVLYWTNDEEKAMEIFKSVANMVDKRVQNFSEKSKSSPDVQAYLQGIGNSIHQKIQLDPDYV
YENFTPILNYVLLESYKEKTPKTKQLASYYLENYDSFSGWAKYLANLQGIDLPEPSQNTKQNVFKIGGVGPGDKLEDLLK
LWGQPDKIQIDKSSGNEFYIYSNKETSFLLNIGSVLQVNAYGDNSPGIDKGVVIGSDRGTAEKVFGKQFQKSGPYFGYSQ
NGNTFVKYRKNKVDQIILQ
>Mature_659_residues
MQRFFKFILFAGTLSIYFPINAQKNNTIDFDAELYAQIVRQSAYQYGTILKSRKVLKDHNHWKKPIDSAFRKLADSSGNP
TFPIVYNLIQDNSFNAFAMAGGQFCINSGTLDILDQVIANSEPDVKDKLNFYRERYIAGVLSHELSHYYNKHTFNSVKKF
YQLKGNPTGEVILENIKFSQDQEVDADQTGFQLLNKAGYGGEYMIRTLELMSDIDNQYKEYIAKKKLDKTSPESMTSLYF
TSHPSPNDRLSRFNSDKQELYSLLATLEKTFDDIQFGKNLDLAKSNLEKALSKFPGNTHLEKSYAICLHKIWMSTASNED
LKIKPVIDMPSFRDSMLFPGGLRKRVVMRTTPGNQAAYTKAKEAYQKVIIKTEDPYFISNYAVLLAYSTEENDMNVAKSL
AGSTVRAENSIPLANNFGVVLYWTNDEEKAMEIFKSVANMVDKRVQNFSEKSKSSPDVQAYLQGIGNSIHQKIQLDPDYV
YENFTPILNYVLLESYKEKTPKTKQLASYYLENYDSFSGWAKYLANLQGIDLPEPSQNTKQNVFKIGGVGPGDKLEDLLK
LWGQPDKIQIDKSSGNEFYIYSNKETSFLLNIGSVLQVNAYGDNSPGIDKGVVIGSDRGTAEKVFGKQFQKSGPYFGYSQ
NGNTFVKYRKNKVDQIILQ

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.24.- [C]

Molecular weight: Translated: 74853; Mature: 74853

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRFFKFILFAGTLSIYFPINAQKNNTIDFDAELYAQIVRQSAYQYGTILKSRKVLKDHN
CHHHHHHHHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
HWKKPIDSAFRKLADSSGNPTFPIVYNLIQDNSFNAFAMAGGQFCINSGTLDILDQVIAN
HHHHHHHHHHHHHHCCCCCCCHHEEEEEHHCCCCCEEEEECCCEEECCCCHHHHHHHHCC
SEPDVKDKLNFYRERYIAGVLSHELSHYYNKHTFNSVKKFYQLKGNPTGEVILENIKFSQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEECCCCCC
DQEVDADQTGFQLLNKAGYGGEYMIRTLELMSDIDNQYKEYIAKKKLDKTSPESMTSLYF
CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEE
TSHPSPNDRLSRFNSDKQELYSLLATLEKTFDDIQFGKNLDLAKSNLEKALSKFPGNTHL
ECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC
EKSYAICLHKIWMSTASNEDLKIKPVIDMPSFRDSMLFPGGLRKRVVMRTTPGNQAAYTK
HHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHH
AKEAYQKVIIKTEDPYFISNYAVLLAYSTEENDMNVAKSLAGSTVRAENSIPLANNFGVV
HHHHHHHEEEECCCCEEEECEEEEEEEECCCCHHHHHHHHCCCEEECCCCCCCCCCCEEE
LYWTNDEEKAMEIFKSVANMVDKRVQNFSEKSKSSPDVQAYLQGIGNSIHQKIQLDPDYV
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHCCCCHHHH
YENFTPILNYVLLESYKEKTPKTKQLASYYLENYDSFSGWAKYLANLQGIDLPEPSQNTK
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCH
QNVFKIGGVGPGDKLEDLLKLWGQPDKIQIDKSSGNEFYIYSNKETSFLLNIGSVLQVNA
HHHEEECCCCCCHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCEEEEECCCEEEEEE
YGDNSPGIDKGVVIGSDRGTAEKVFGKQFQKSGPYFGYSQNGNTFVKYRKNKVDQIILQ
CCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHCCHHHHHCC
>Mature Secondary Structure
MQRFFKFILFAGTLSIYFPINAQKNNTIDFDAELYAQIVRQSAYQYGTILKSRKVLKDHN
CHHHHHHHHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
HWKKPIDSAFRKLADSSGNPTFPIVYNLIQDNSFNAFAMAGGQFCINSGTLDILDQVIAN
HHHHHHHHHHHHHHCCCCCCCHHEEEEEHHCCCCCEEEEECCCEEECCCCHHHHHHHHCC
SEPDVKDKLNFYRERYIAGVLSHELSHYYNKHTFNSVKKFYQLKGNPTGEVILENIKFSQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEECCCCCC
DQEVDADQTGFQLLNKAGYGGEYMIRTLELMSDIDNQYKEYIAKKKLDKTSPESMTSLYF
CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEE
TSHPSPNDRLSRFNSDKQELYSLLATLEKTFDDIQFGKNLDLAKSNLEKALSKFPGNTHL
ECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC
EKSYAICLHKIWMSTASNEDLKIKPVIDMPSFRDSMLFPGGLRKRVVMRTTPGNQAAYTK
HHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHH
AKEAYQKVIIKTEDPYFISNYAVLLAYSTEENDMNVAKSLAGSTVRAENSIPLANNFGVV
HHHHHHHEEEECCCCEEEECEEEEEEEECCCCHHHHHHHHCCCEEECCCCCCCCCCCEEE
LYWTNDEEKAMEIFKSVANMVDKRVQNFSEKSKSSPDVQAYLQGIGNSIHQKIQLDPDYV
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHCCCCHHHH
YENFTPILNYVLLESYKEKTPKTKQLASYYLENYDSFSGWAKYLANLQGIDLPEPSQNTK
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCH
QNVFKIGGVGPGDKLEDLLKLWGQPDKIQIDKSSGNEFYIYSNKETSFLLNIGSVLQVNA
HHHEEECCCCCCHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCEEEEECCCEEEEEE
YGDNSPGIDKGVVIGSDRGTAEKVFGKQFQKSGPYFGYSQNGNTFVKYRKNKVDQIILQ
CCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA