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The map label for this gene is sanA

Identifier: 45659108

GI number: 45659108

Start: 4029923

End: 4030615

Strand: Direct

Name: sanA

Synonym: LIC13287

Alternate gene names: 45659108

Gene position: 4029923-4030615 (Clockwise)

Preceding gene: 45659098

Following gene: 45659113

Centisome position: 94.22

GC content: 35.35

Gene sequence:

>693_bases
GTGTTTCAGTTAGATTACTTTAAAAAATCCAAGTTTTACACCCGAAGTTTTTTCTTTTTTTGTATTTTTATATCCATTCC
CATTGCGATCGATTTTAGTTTTGAAGAATTATATCTTCGTACAGAAAGATTTCAAAATCATAGATCAGCAAAACCAGCAA
CGGTCGCGGTAGTTCCCGGAGCTTCCGTTTATAAAAACGAACCTTCCGCTGTTTTAAAAGATAGATTGGACTGTGCTTTA
GAATTATATCACCAGGGTAAGGTGAAAAAAATTCTTCTTTCTGGAGATAACGGTTCCATTTATTACAACGAAGTAAAACC
TATGTTACTCTATATTCTTAAAAACGAAGTAAACGAAAAAGATATATTCGTAGATCACGCGGGTTTTAGAACGTTAGACA
CATTGGTTCGTGCAAAGGAAATTTTTCAGATTCAAGATTTGATTTTTGTCAGCCAAAGAGTCTACCAACCTAGAGCAGCG
TTTCTTGCAAATAAAATCGGTCTTAAATTTCAAGCTTTTGAATCCGATCGAAGAATTTATACAAGCGGGCCTTTCAGCAG
ATTTAGAGAATTTTTTGCAAGAACTCTGGCCTGGATTGATATGAACCTATTCAAAACAAATCCGAAATATTTAGGAGACC
CATTTCCGATCGAAGGAAGTGGAGTCAAAACCTGGAAAGGTTCCGTTCTTTAA

Upstream 100 bases:

>100_bases
ACTCAGATTTACTGAAAAGTAAAAAAGGGCTTTTTCTATTAAAATTTGGCTTGTAAGCTTACATGAAAAAATCGCTGATT
TTAAAGGATTCCAAAATTCT

Downstream 100 bases:

>100_bases
AATTTTTGAATCTATTTTTGATTTTAGAAATTGTAGATTCGGGCTCCAGCTTTTTTAAATTTTTATTGAGTCAAGATTAT
TTTTGAGCGGTAGAAACCTT

Product: vancomycin resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MFQLDYFKKSKFYTRSFFFFCIFISIPIAIDFSFEELYLRTERFQNHRSAKPATVAVVPGASVYKNEPSAVLKDRLDCAL
ELYHQGKVKKILLSGDNGSIYYNEVKPMLLYILKNEVNEKDIFVDHAGFRTLDTLVRAKEIFQIQDLIFVSQRVYQPRAA
FLANKIGLKFQAFESDRRIYTSGPFSRFREFFARTLAWIDMNLFKTNPKYLGDPFPIEGSGVKTWKGSVL

Sequences:

>Translated_230_residues
MFQLDYFKKSKFYTRSFFFFCIFISIPIAIDFSFEELYLRTERFQNHRSAKPATVAVVPGASVYKNEPSAVLKDRLDCAL
ELYHQGKVKKILLSGDNGSIYYNEVKPMLLYILKNEVNEKDIFVDHAGFRTLDTLVRAKEIFQIQDLIFVSQRVYQPRAA
FLANKIGLKFQAFESDRRIYTSGPFSRFREFFARTLAWIDMNLFKTNPKYLGDPFPIEGSGVKTWKGSVL
>Mature_230_residues
MFQLDYFKKSKFYTRSFFFFCIFISIPIAIDFSFEELYLRTERFQNHRSAKPATVAVVPGASVYKNEPSAVLKDRLDCAL
ELYHQGKVKKILLSGDNGSIYYNEVKPMLLYILKNEVNEKDIFVDHAGFRTLDTLVRAKEIFQIQDLIFVSQRVYQPRAA
FLANKIGLKFQAFESDRRIYTSGPFSRFREFFARTLAWIDMNLFKTNPKYLGDPFPIEGSGVKTWKGSVL

Specific function: Unknown

COG id: COG2949

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli sanA [H]

Homologues:

Organism=Escherichia coli, GI1789468, Length=151, Percent_Identity=39.0728476821192, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1788466, Length=145, Percent_Identity=39.3103448275862, Blast_Score=100, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 26789; Mature: 26789

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQLDYFKKSKFYTRSFFFFCIFISIPIAIDFSFEELYLRTERFQNHRSAKPATVAVVPG
CCCCCCHHCCCHHHHHHHHHHHHHHHCEEEECCHHHHHHHHHHHHHCCCCCCEEEEEECC
ASVYKNEPSAVLKDRLDCALELYHQGKVKKILLSGDNGSIYYNEVKPMLLYILKNEVNEK
CHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEECHHHHHHHHHHHCCCCC
DIFVDHAGFRTLDTLVRAKEIFQIQDLIFVSQRVYQPRAAFLANKIGLKFQAFESDRRIY
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEEECCCCEEE
TSGPFSRFREFFARTLAWIDMNLFKTNPKYLGDPFPIEGSGVKTWKGSVL
ECCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFQLDYFKKSKFYTRSFFFFCIFISIPIAIDFSFEELYLRTERFQNHRSAKPATVAVVPG
CCCCCCHHCCCHHHHHHHHHHHHHHHCEEEECCHHHHHHHHHHHHHCCCCCCEEEEEECC
ASVYKNEPSAVLKDRLDCALELYHQGKVKKILLSGDNGSIYYNEVKPMLLYILKNEVNEK
CHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEECHHHHHHHHHHHCCCCC
DIFVDHAGFRTLDTLVRAKEIFQIQDLIFVSQRVYQPRAAFLANKIGLKFQAFESDRRIY
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEEECCCCEEE
TSGPFSRFREFFARTLAWIDMNLFKTNPKYLGDPFPIEGSGVKTWKGSVL
ECCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]