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The map label for this gene is resD [H]

Identifier: 45659063

GI number: 45659063

Start: 3978293

End: 3979063

Strand: Direct

Name: resD [H]

Synonym: LIC13242

Alternate gene names: 45659063

Gene position: 3978293-3979063 (Clockwise)

Preceding gene: 45659062

Following gene: 45659067

Centisome position: 93.01

GC content: 31.78

Gene sequence:

>771_bases
TTGAAAGTACTCGTTTTAGATTCTGGTACAACGGTTAGAAAAATTATATCCTCTTTTTTTCCTACTGAGGATTTTCAAAT
TTTCGAAGCAGGTACGGCAAAAGAAGGATTAGATCTTACGTTTCAGGAACATTTTGATCTAATCACAATCGGAATGGTAC
TTCCAGACTCGGACGGATTTACGGTTTGTAAAACTATCCGAAACGGTCTAATAGACAACAAACAGAGTATATGCAAAAAT
TCTAAAATATTTCTCATAACTTCTGGGAATATAGAAACAAACCGAATAAAATCAGTAGAATCTGGCTTTGATGGAATTTT
TCCAAAACCTACCGGAATTGAAGAATTTAAAACGGTAATCGAAGAGATTATAAAATTGGCTTATCAATCTAGTCCTATAG
AATCTAAAAAAGCTGGAAAAATCCTGATCATAGACGATTCAGAATTAAACTTGCTTCTTTTGGGAAAAATTTTAGAAAAA
AATGGCTATTCTTTTCAAGCATTTACAGAAGGAAAAAAAGCCTACGAATATCTTCAATCTTCGAACGAAGTATCTTATAT
TTTAACAGACTGGATCATGCCGGATTTTTCAGGAGAAGAGCTTGTAGAAGCAATACGTAAACAGGAAAAATTTAACGACA
TTCCGATTGCGGTCATCACTGGAATTGAAGAAAAAGAAGATTTTAAAATCTCCATTCCTCAAAAAAATATTTACTTACTT
CAAAAGCCGTATTTTGAAAGAAAAATTTTAGAATATATTCAAAAAGTTTAA

Upstream 100 bases:

>100_bases
AAATGATACAAGATCTAAAACAAATTTTCGAAGAATTAAAAAAACATATTCAAATTTTTGAAACTTCTATTTCAAACATA
AACTTGAGAGAAAAACAAAT

Downstream 100 bases:

>100_bases
TTTATTGTAAAAAATTGAATTTCCCGAATCACGTCAGGATGACAATCCAACCTAAATTCCCCCGAAAAAGGTTTTAAACC
AGAAAACCATTGTCCGTTTT

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MKVLVLDSGTTVRKIISSFFPTEDFQIFEAGTAKEGLDLTFQEHFDLITIGMVLPDSDGFTVCKTIRNGLIDNKQSICKN
SKIFLITSGNIETNRIKSVESGFDGIFPKPTGIEEFKTVIEEIIKLAYQSSPIESKKAGKILIIDDSELNLLLLGKILEK
NGYSFQAFTEGKKAYEYLQSSNEVSYILTDWIMPDFSGEELVEAIRKQEKFNDIPIAVITGIEEKEDFKISIPQKNIYLL
QKPYFERKILEYIQKV

Sequences:

>Translated_256_residues
MKVLVLDSGTTVRKIISSFFPTEDFQIFEAGTAKEGLDLTFQEHFDLITIGMVLPDSDGFTVCKTIRNGLIDNKQSICKN
SKIFLITSGNIETNRIKSVESGFDGIFPKPTGIEEFKTVIEEIIKLAYQSSPIESKKAGKILIIDDSELNLLLLGKILEK
NGYSFQAFTEGKKAYEYLQSSNEVSYILTDWIMPDFSGEELVEAIRKQEKFNDIPIAVITGIEEKEDFKISIPQKNIYLL
QKPYFERKILEYIQKV
>Mature_256_residues
MKVLVLDSGTTVRKIISSFFPTEDFQIFEAGTAKEGLDLTFQEHFDLITIGMVLPDSDGFTVCKTIRNGLIDNKQSICKN
SKIFLITSGNIETNRIKSVESGFDGIFPKPTGIEEFKTVIEEIIKLAYQSSPIESKKAGKILIIDDSELNLLLLGKILEK
NGYSFQAFTEGKKAYEYLQSSNEVSYILTDWIMPDFSGEELVEAIRKQEKFNDIPIAVITGIEEKEDFKISIPQKNIYLL
QKPYFERKILEYIQKV

Specific function: Member of the two-component regulatory system ResD/ResE. Required for the expression of resA, ctaA, qcrABC and fnr; activation role in global regulation of aerobic and anaerobic respiration [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 29078; Mature: 29078

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLVLDSGTTVRKIISSFFPTEDFQIFEAGTAKEGLDLTFQEHFDLITIGMVLPDSDGF
CEEEEECCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCEEHHHCCCEEEEEEEEECCCCH
TVCKTIRNGLIDNKQSICKNSKIFLITSGNIETNRIKSVESGFDGIFPKPTGIEEFKTVI
HHHHHHHHCCCCCCHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHH
EEIIKLAYQSSPIESKKAGKILIIDDSELNLLLLGKILEKNGYSFQAFTEGKKAYEYLQS
HHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEHHHHHCCCCEEEEHHHHHHHHHHHHC
SNEVSYILTDWIMPDFSGEELVEAIRKQEKFNDIPIAVITGIEEKEDFKISIPQKNIYLL
CCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEECCCCCEEEE
QKPYFERKILEYIQKV
ECCHHHHHHHHHHHCC
>Mature Secondary Structure
MKVLVLDSGTTVRKIISSFFPTEDFQIFEAGTAKEGLDLTFQEHFDLITIGMVLPDSDGF
CEEEEECCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCEEHHHCCCEEEEEEEEECCCCH
TVCKTIRNGLIDNKQSICKNSKIFLITSGNIETNRIKSVESGFDGIFPKPTGIEEFKTVI
HHHHHHHHCCCCCCHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHH
EEIIKLAYQSSPIESKKAGKILIIDDSELNLLLLGKILEKNGYSFQAFTEGKKAYEYLQS
HHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEHHHHHCCCCEEEEHHHHHHHHHHHHC
SNEVSYILTDWIMPDFSGEELVEAIRKQEKFNDIPIAVITGIEEKEDFKISIPQKNIYLL
CCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEECCCCCEEEE
QKPYFERKILEYIQKV
ECCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934829; 9384377; 8631715; 8682783 [H]