Click here to switch to the map view.

The map label for this gene is 45658953

Identifier: 45658953

GI number: 45658953

Start: 3835620

End: 3836165

Strand: Reverse

Name: 45658953

Synonym: LIC13131

Alternate gene names: NA

Gene position: 3836165-3835620 (Counterclockwise)

Preceding gene: 45658954

Following gene: 45658950

Centisome position: 89.69

GC content: 32.6

Gene sequence:

>546_bases
ATGAAACATTTTAACCAACTCGTTTTGTCGTTTTTGATTTTTTTTACGTCTCAAAGTTACGCTTCAGAGATCCTTAAAAA
AGAAATCACTTTTTTAGCAATTCATCCTATGAAAGAAGTTCATGGAGCTTGTAAGGAGATACAAGTAGATTCTCCTCAAA
TTCAAACGAGCGGAACCGTTTATAAATTGAATTCTCCTTTTACAATTAAAATTCCGATTTTGAAAATTCATTCGGGAGAT
GAAAACAGAGACTCTCATATCATGGAAATTTTAGGTTATCCTGATATTCCGGAAATTATAGTTGTCGTAGAATCCGCCGA
AGCCGTTGGTGAAACGTATTTAATTCGTGGTAAACTTTCGATTCACGGATTTACTCGCGACTTTCAATCTTCTGGAAAAG
TTGAGCCAAATGGGGTGGGTCAGATTCGTATATTTGGAAAAGTGAATATTCAATTTTCCGATTTTAATCTCGAAAGACCC
TCTCTTTTATTTATAAAAACAAAAGAAGAAATTGAAATTGGATATGATTTTTTAATTAAGATATAA

Upstream 100 bases:

>100_bases
CCCTGAAGCGGCGAGAGATATGCAGCAAGTAGGATGGGCGGGTTTTGGAGCCTTTACTTTGTCTTTGTTTGTAATTACAT
TTTAAGGAATTTTAATATAT

Downstream 100 bases:

>100_bases
AAACATTTTGTATTTTAGTTTTTGAATCAAAAAAATTTTCCGTTTAAATAGAAACCTCTTCTAAAATCTGCTCTCCGAGC
TGGATGGTGAGAATTTTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MKHFNQLVLSFLIFFTSQSYASEILKKEITFLAIHPMKEVHGACKEIQVDSPQIQTSGTVYKLNSPFTIKIPILKIHSGD
ENRDSHIMEILGYPDIPEIIVVVESAEAVGETYLIRGKLSIHGFTRDFQSSGKVEPNGVGQIRIFGKVNIQFSDFNLERP
SLLFIKTKEEIEIGYDFLIKI

Sequences:

>Translated_181_residues
MKHFNQLVLSFLIFFTSQSYASEILKKEITFLAIHPMKEVHGACKEIQVDSPQIQTSGTVYKLNSPFTIKIPILKIHSGD
ENRDSHIMEILGYPDIPEIIVVVESAEAVGETYLIRGKLSIHGFTRDFQSSGKVEPNGVGQIRIFGKVNIQFSDFNLERP
SLLFIKTKEEIEIGYDFLIKI
>Mature_181_residues
MKHFNQLVLSFLIFFTSQSYASEILKKEITFLAIHPMKEVHGACKEIQVDSPQIQTSGTVYKLNSPFTIKIPILKIHSGD
ENRDSHIMEILGYPDIPEIIVVVESAEAVGETYLIRGKLSIHGFTRDFQSSGKVEPNGVGQIRIFGKVNIQFSDFNLERP
SLLFIKTKEEIEIGYDFLIKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20530; Mature: 20530

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHFNQLVLSFLIFFTSQSYASEILKKEITFLAIHPMKEVHGACKEIQVDSPQIQTSGTV
CCHHHHHHHHHHHHHCCCHHHHHHHHHCEEEEEECCHHHHCCHHHEEECCCCCEECCCEE
YKLNSPFTIKIPILKIHSGDENRDSHIMEILGYPDIPEIIVVVESAEAVGETYLIRGKLS
EEECCCEEEEEEEEEEECCCCCCCCHHHEECCCCCCCEEEEEEECCCCCCCEEEEEEEEE
IHGFTRDFQSSGKVEPNGVGQIRIFGKVNIQFSDFNLERPSLLFIKTKEEIEIGYDFLIK
EEEECCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCEEEEEEECCCEEECEEEEEE
I
C
>Mature Secondary Structure
MKHFNQLVLSFLIFFTSQSYASEILKKEITFLAIHPMKEVHGACKEIQVDSPQIQTSGTV
CCHHHHHHHHHHHHHCCCHHHHHHHHHCEEEEEECCHHHHCCHHHEEECCCCCEECCCEE
YKLNSPFTIKIPILKIHSGDENRDSHIMEILGYPDIPEIIVVVESAEAVGETYLIRGKLS
EEECCCEEEEEEEEEEECCCCCCCCHHHEECCCCCCCEEEEEEECCCCCCCEEEEEEEEE
IHGFTRDFQSSGKVEPNGVGQIRIFGKVNIQFSDFNLERPSLLFIKTKEEIEIGYDFLIK
EEEECCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCEEEEEEECCCEEECEEEEEE
I
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA