| Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_005823 |
| Length | 4,277,185 |
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The map label for this gene is 45658931
Identifier: 45658931
GI number: 45658931
Start: 3802503
End: 3803231
Strand: Reverse
Name: 45658931
Synonym: LIC13108
Alternate gene names: NA
Gene position: 3803231-3802503 (Counterclockwise)
Preceding gene: 45658932
Following gene: 45658927
Centisome position: 88.92
GC content: 34.98
Gene sequence:
>729_bases GTGAAATTTTTTATTCCCGCAGCCGGTTTTGGAACTAGGATGAAGGAGCTTACCAAAAACGTTCCTAAACCACTACTTAC TGTAAATGGAATTCCTATTATCTATTATTCTTTATTTCAAGCTTGGAAACAGAATGCAGAAGTTGCCATAATCAATATTC ATTATCTCGGAGAAAAGATTCGTAAAGAGCTGGAAACATTTTCACTTTTTCCGCTGGTTTTCTCTGAGGAAAAAAAAGAA ATTTTGGGAACAGCCGGAGGAATTAGAACCGGATTGGAAAGGGCAGGATGGATGGGGGAAACGGTCGGGATTATTAATCC TGATTTTCTTTATTTTCCAGAAAAGCTTTTTCAAATGCCAAATGTTCTTTCGGAAGAAGATTGCCTTTTGTATTTATTGC CTCAGCCAAAGACAGCGAGTTATACAGGACTTGAATTGAAAAATGGGAAAATTCTTTTCGGAAAAGGAAATATGTTCTAC GTAGGAATTTCCGTGTTGAATAGTAATATTCTGGATGGAATTCAATCAGAAACTTTCTTTGATCTTTCTCAAATCTTTCA AGAACTTTCCATTAAGCAAAGGTTAGGTGGAAAAATTTTTCCAGGAAATGTGTTCGATTTAGGTGAAAAAGAATATTATA TTTCTCTAAAGGATAATGATTTTTCCGAACGTTTAGGTTCTAGTTGGAAAGAGTTTTTGGAACTTTGTAGACTTCCCAAT CATAAATGA
Upstream 100 bases:
>100_bases AAATTGTTCAAGTTGGTTTGTTTCCAGATCAACTCTACGTATTTTTTCATCTATTAAAAGAAGAACTCTTATCCGATTCT AATTTTATGAAAGGGATCAG
Downstream 100 bases:
>100_bases CGTGGATTCGAAGTCAGGAAATAAGAAAGAATTTTCTAAAAGTAGTAGTTCCTACAATTTTAGAATTTGTTCATAAAATC GTAATTTATGGTAGTTCCCA
Product: sugar-phosphate nucleotidyl transferase
Products: phosphate; GDPmannose
Alternate protein names: Nucleotidyltransferase Family Protein; Mannose-1-Phosphate Guanylyltransferase; Nucleoside-Diphosphate-Sugar Pyrophosphorylase; Nucleotidyltransferase; Nucleotidyl Transferase Family Protein; Nucleotidyltransferase Protein; Nucleotide-Diphospho-Sugar Transferase
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MKFFIPAAGFGTRMKELTKNVPKPLLTVNGIPIIYYSLFQAWKQNAEVAIINIHYLGEKIRKELETFSLFPLVFSEEKKE ILGTAGGIRTGLERAGWMGETVGIINPDFLYFPEKLFQMPNVLSEEDCLLYLLPQPKTASYTGLELKNGKILFGKGNMFY VGISVLNSNILDGIQSETFFDLSQIFQELSIKQRLGGKIFPGNVFDLGEKEYYISLKDNDFSERLGSSWKEFLELCRLPN HK
Sequences:
>Translated_242_residues MKFFIPAAGFGTRMKELTKNVPKPLLTVNGIPIIYYSLFQAWKQNAEVAIINIHYLGEKIRKELETFSLFPLVFSEEKKE ILGTAGGIRTGLERAGWMGETVGIINPDFLYFPEKLFQMPNVLSEEDCLLYLLPQPKTASYTGLELKNGKILFGKGNMFY VGISVLNSNILDGIQSETFFDLSQIFQELSIKQRLGGKIFPGNVFDLGEKEYYISLKDNDFSERLGSSWKEFLELCRLPN HK >Mature_242_residues MKFFIPAAGFGTRMKELTKNVPKPLLTVNGIPIIYYSLFQAWKQNAEVAIINIHYLGEKIRKELETFSLFPLVFSEEKKE ILGTAGGIRTGLERAGWMGETVGIINPDFLYFPEKLFQMPNVLSEEDCLLYLLPQPKTASYTGLELKNGKILFGKGNMFY VGISVLNSNILDGIQSETFFDLSQIFQELSIKQRLGGKIFPGNVFDLGEKEYYISLKDNDFSERLGSSWKEFLELCRLPN HK
Specific function: Unknown
COG id: COG1208
COG function: function code MJ; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.7.22
Molecular weight: Translated: 27543; Mature: 27543
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFFIPAAGFGTRMKELTKNVPKPLLTVNGIPIIYYSLFQAWKQNAEVAIINIHYLGEKI CEEEECCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHH RKELETFSLFPLVFSEEKKEILGTAGGIRTGLERAGWMGETVGIINPDFLYFPEKLFQMP HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHCCHHHHHCC NVLSEEDCLLYLLPQPKTASYTGLELKNGKILFGKGNMFYVGISVLNSNILDGIQSETFF CCCCCCCCEEEEECCCCCCCCCCEEEECCEEEEECCCEEEEEHHHHHHHHHHHHHHHHHH DLSQIFQELSIKQRLGGKIFPGNVFDLGEKEYYISLKDNDFSERLGSSWKEFLELCRLPN HHHHHHHHHHHHHHHCCEECCCCCEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCC HK CC >Mature Secondary Structure MKFFIPAAGFGTRMKELTKNVPKPLLTVNGIPIIYYSLFQAWKQNAEVAIINIHYLGEKI CEEEECCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHH RKELETFSLFPLVFSEEKKEILGTAGGIRTGLERAGWMGETVGIINPDFLYFPEKLFQMP HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHCCHHHHHCC NVLSEEDCLLYLLPQPKTASYTGLELKNGKILFGKGNMFYVGISVLNSNILDGIQSETFF CCCCCCCCEEEEECCCCCCCCCCEEEECCEEEEECCCEEEEEHHHHHHHHHHHHHHHHHH DLSQIFQELSIKQRLGGKIFPGNVFDLGEKEYYISLKDNDFSERLGSSWKEFLELCRLPN HHHHHHHHHHHHHHHCCEECCCCCEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCC HK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GDP; alpha-D-mannose 1-phosphate
Specific reaction: GDP + alpha-D-mannose 1-phosphate = phosphate + GDP-mannose
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA