Click here to switch to the map view.

The map label for this gene is 45658930

Identifier: 45658930

GI number: 45658930

Start: 3801209

End: 3802087

Strand: Direct

Name: 45658930

Synonym: LIC13107

Alternate gene names: NA

Gene position: 3801209-3802087 (Clockwise)

Preceding gene: 45658929

Following gene: 45658936

Centisome position: 88.87

GC content: 35.49

Gene sequence:

>879_bases
ATGGACCAAGAATTTAAAAGATGGACCCGTCTTCTTAGGGCAATCGAAGCGGGAACAAAAATCGAACTCGATGGATATAT
ACTCAACGATTCCTTTAGATCGAATTTAGAAAAGTTCGTAAAACTTTGTCTAGAAAACTATAACAAAAACGATCTGGCTC
CAGTGGTTTATTCTGTAATTCAGGAAATGCTTCTACGGGCGACTGTCTCTAATCTGAGAGAATATTTTTGCCAGGAAAAC
GGAATCGATTTTTTCGATCAAAATTCTTTCGATTCTAGTGAAGAACAATTTAGGAAATTCTTAAATACTTTAGATCTCAA
AGCGGTAAGAGATTCTTTAAAGTCAAAGGATTTATTTTTAAAAGTGATCATTCGTCACAACCATACTGGGCTGGCTGCAG
AAGTATTCAATAATTCTAAATCGATTCCATTTATAGAAGAACGTCTAAGAAAATATCTTGCTTCCGCAATGGAATATAAA
AATCTAATGGACTATTATAATTCTTATCCGGAAGATAAAGAAGGCAAGAATCTTGGGCTTGCATTTTCTATTTTAATGCT
TCGTGAAACCGGATTAAAACCGGAATTGCTTAGAATCAGTTCCAGAAACGACGTTCATATTTCTAGACTGGAAATTCCGT
TTGGAGAAGAATATAAAAGTATTCGTAAACAAATTCTAAAATCCTCTATTTTTACAAACGAAAACCAAGAACCAGAACTT
CCTTGGAAAACGAGCCGCTGCAGTTACTGTGGTAGAACCGTAGACGATCGTATTTTTTTCTCAAAAATTCCAGAGGATAT
TCCAGTTAAAGGAATTCCGGAACCAGTTCGGTCTGGAAACGGCATTTGTGCATGGTGTTTTTCCTCTTATTTAACGTAA

Upstream 100 bases:

>100_bases
AGATTTTTTCTTATGCTACACTCACGTTAATTAAAAAAAATAGGTTTTCTTTCTAGAAAACTTAGATAGTTTTTCCCGGA
AATTTTCTACTGAAGTAAAA

Downstream 100 bases:

>100_bases
GTTAGGCGTAAGAAAATTTTTCTAAAAGTAGTAGTTCTTACATTCATTTATAGAAATGAGTAATCCTAATTTTTAAAGGT
TAAAAACAGCTGATTTCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MDQEFKRWTRLLRAIEAGTKIELDGYILNDSFRSNLEKFVKLCLENYNKNDLAPVVYSVIQEMLLRATVSNLREYFCQEN
GIDFFDQNSFDSSEEQFRKFLNTLDLKAVRDSLKSKDLFLKVIIRHNHTGLAAEVFNNSKSIPFIEERLRKYLASAMEYK
NLMDYYNSYPEDKEGKNLGLAFSILMLRETGLKPELLRISSRNDVHISRLEIPFGEEYKSIRKQILKSSIFTNENQEPEL
PWKTSRCSYCGRTVDDRIFFSKIPEDIPVKGIPEPVRSGNGICAWCFSSYLT

Sequences:

>Translated_292_residues
MDQEFKRWTRLLRAIEAGTKIELDGYILNDSFRSNLEKFVKLCLENYNKNDLAPVVYSVIQEMLLRATVSNLREYFCQEN
GIDFFDQNSFDSSEEQFRKFLNTLDLKAVRDSLKSKDLFLKVIIRHNHTGLAAEVFNNSKSIPFIEERLRKYLASAMEYK
NLMDYYNSYPEDKEGKNLGLAFSILMLRETGLKPELLRISSRNDVHISRLEIPFGEEYKSIRKQILKSSIFTNENQEPEL
PWKTSRCSYCGRTVDDRIFFSKIPEDIPVKGIPEPVRSGNGICAWCFSSYLT
>Mature_292_residues
MDQEFKRWTRLLRAIEAGTKIELDGYILNDSFRSNLEKFVKLCLENYNKNDLAPVVYSVIQEMLLRATVSNLREYFCQEN
GIDFFDQNSFDSSEEQFRKFLNTLDLKAVRDSLKSKDLFLKVIIRHNHTGLAAEVFNNSKSIPFIEERLRKYLASAMEYK
NLMDYYNSYPEDKEGKNLGLAFSILMLRETGLKPELLRISSRNDVHISRLEIPFGEEYKSIRKQILKSSIFTNENQEPEL
PWKTSRCSYCGRTVDDRIFFSKIPEDIPVKGIPEPVRSGNGICAWCFSSYLT

Specific function: Unknown

COG id: COG1639

COG function: function code T; Predicted signal transduction protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR013976 [H]

Pfam domain/function: PF02518 HATPase_c; PF08668 HDOD [H]

EC number: NA

Molecular weight: Translated: 34074; Mature: 34074

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQEFKRWTRLLRAIEAGTKIELDGYILNDSFRSNLEKFVKLCLENYNKNDLAPVVYSVI
CCHHHHHHHHHHHHHHCCCEEEECCEEECHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
QEMLLRATVSNLREYFCQENGIDFFDQNSFDSSEEQFRKFLNTLDLKAVRDSLKSKDLFL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVIIRHNHTGLAAEVFNNSKSIPFIEERLRKYLASAMEYKNLMDYYNSYPEDKEGKNLGL
HHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
AFSILMLRETGLKPELLRISSRNDVHISRLEIPFGEEYKSIRKQILKSSIFTNENQEPEL
HHHHHHHHHCCCCHHHEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCC
PWKTSRCSYCGRTVDDRIFFSKIPEDIPVKGIPEPVRSGNGICAWCFSSYLT
CCCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHCCCCEEHHHHHHHCC
>Mature Secondary Structure
MDQEFKRWTRLLRAIEAGTKIELDGYILNDSFRSNLEKFVKLCLENYNKNDLAPVVYSVI
CCHHHHHHHHHHHHHHCCCEEEECCEEECHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
QEMLLRATVSNLREYFCQENGIDFFDQNSFDSSEEQFRKFLNTLDLKAVRDSLKSKDLFL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVIIRHNHTGLAAEVFNNSKSIPFIEERLRKYLASAMEYKNLMDYYNSYPEDKEGKNLGL
HHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
AFSILMLRETGLKPELLRISSRNDVHISRLEIPFGEEYKSIRKQILKSSIFTNENQEPEL
HHHHHHHHHCCCCHHHEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCC
PWKTSRCSYCGRTVDDRIFFSKIPEDIPVKGIPEPVRSGNGICAWCFSSYLT
CCCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHCCCCEEHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]