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The map label for this gene is 45658921

Identifier: 45658921

GI number: 45658921

Start: 3785858

End: 3786565

Strand: Direct

Name: 45658921

Synonym: LIC13095

Alternate gene names: NA

Gene position: 3785858-3786565 (Clockwise)

Preceding gene: 45658920

Following gene: 45658923

Centisome position: 88.51

GC content: 32.2

Gene sequence:

>708_bases
ATGTCCGACAAGGATAAAAATAAAAAATTTTCTTCCGCTAAGAGAAGGATTCTTCAAGAAATCAATAAGGAAAATTTTCT
TTTTGCACTGACTTTAATCGATCGAGAAATTTCTTCAGGAAATGAAGACCCGGAACTATATTATAATTTTGCAATATGCT
GTGCAAGAACTGATAATTATAAAAAATGCGTTTCTATTTTAGAAGAACTCCTTGAAAAATTTCCTAGATTTGGTGAAAGG
GAAAATTCCATTTTGATGATCGTTTATGCGTTAATTCAAAATAAAGAATATTCAAAAGCCTTAGATAAATGTGAAGAACG
CCTCAAGTTTCAAGTGGACGATCTAAAAATTCTTTCTATGAAAGCATTTGCTCTGGAAAAATCCGGTAAGGTCGAGGAAG
CAATAGAAATTCATAAGAGAATTCTTAGGCTACGTCCCGATTATAAAAATAGTCTAAATTCTCTCGGTTATTTATTGTTA
AATCAAAAAAAACCTAATCCGGAAGAATGGAAGTTGGCCGTTGATTGTTTAAAATCCGTTTTAAAAAATGAACCTGATAA
CCCCGCTTATTTGGATTCTTTCGGTGTTCTTCTTTTCAAAAGTGGTAAAAAAGAAGAAGCAGTTTTAGCTTTTAAAAAAG
CTCTCTTAAAATCTCCTACACATCCTGAGATATTACGACACATTGAAAAAGCGGAAGACTCTACTTGA

Upstream 100 bases:

>100_bases
CAAATATGCGAATTTTAATAGGTACGTGAAAATAAAAATATAGATCAATAAATCCATTACGTTTTGATATAAAATAACTG
TCGTTAGGTGAATTATAAAA

Downstream 100 bases:

>100_bases
CACTGCTACTGTTTTCAAAAACATGGAGTCGAAAACGGGATGTAGCGCAGGGGTAGCGCATCTGCCTTGGGAGCAGAGGG
TCGTAGGTTCAAATCCTATC

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Repeat-Containing Protein

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MSDKDKNKKFSSAKRRILQEINKENFLFALTLIDREISSGNEDPELYYNFAICCARTDNYKKCVSILEELLEKFPRFGER
ENSILMIVYALIQNKEYSKALDKCEERLKFQVDDLKILSMKAFALEKSGKVEEAIEIHKRILRLRPDYKNSLNSLGYLLL
NQKKPNPEEWKLAVDCLKSVLKNEPDNPAYLDSFGVLLFKSGKKEEAVLAFKKALLKSPTHPEILRHIEKAEDST

Sequences:

>Translated_235_residues
MSDKDKNKKFSSAKRRILQEINKENFLFALTLIDREISSGNEDPELYYNFAICCARTDNYKKCVSILEELLEKFPRFGER
ENSILMIVYALIQNKEYSKALDKCEERLKFQVDDLKILSMKAFALEKSGKVEEAIEIHKRILRLRPDYKNSLNSLGYLLL
NQKKPNPEEWKLAVDCLKSVLKNEPDNPAYLDSFGVLLFKSGKKEEAVLAFKKALLKSPTHPEILRHIEKAEDST
>Mature_234_residues
SDKDKNKKFSSAKRRILQEINKENFLFALTLIDREISSGNEDPELYYNFAICCARTDNYKKCVSILEELLEKFPRFGERE
NSILMIVYALIQNKEYSKALDKCEERLKFQVDDLKILSMKAFALEKSGKVEEAIEIHKRILRLRPDYKNSLNSLGYLLLN
QKKPNPEEWKLAVDCLKSVLKNEPDNPAYLDSFGVLLFKSGKKEEAVLAFKKALLKSPTHPEILRHIEKAEDST

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27254; Mature: 27123

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDKDKNKKFSSAKRRILQEINKENFLFALTLIDREISSGNEDPELYYNFAICCARTDNY
CCCCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCCHHEEEEEEEEECCCCH
KKCVSILEELLEKFPRFGERENSILMIVYALIQNKEYSKALDKCEERLKFQVDDLKILSM
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHH
KAFALEKSGKVEEAIEIHKRILRLRPDYKNSLNSLGYLLLNQKKPNPEEWKLAVDCLKSV
HHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHH
LKNEPDNPAYLDSFGVLLFKSGKKEEAVLAFKKALLKSPTHPEILRHIEKAEDST
HCCCCCCCHHHHHHHHHEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
SDKDKNKKFSSAKRRILQEINKENFLFALTLIDREISSGNEDPELYYNFAICCARTDNY
CCCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCCHHEEEEEEEEECCCCH
KKCVSILEELLEKFPRFGERENSILMIVYALIQNKEYSKALDKCEERLKFQVDDLKILSM
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHH
KAFALEKSGKVEEAIEIHKRILRLRPDYKNSLNSLGYLLLNQKKPNPEEWKLAVDCLKSV
HHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHH
LKNEPDNPAYLDSFGVLLFKSGKKEEAVLAFKKALLKSPTHPEILRHIEKAEDST
HCCCCCCCHHHHHHHHHEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA