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The map label for this gene is 45658892

Identifier: 45658892

GI number: 45658892

Start: 3742428

End: 3743855

Strand: Direct

Name: 45658892

Synonym: LIC13066

Alternate gene names: NA

Gene position: 3742428-3743855 (Clockwise)

Preceding gene: 45658889

Following gene: 45658898

Centisome position: 87.5

GC content: 36.76

Gene sequence:

>1428_bases
TTGGCTCGCGTTTATCTTTTTATTTTTATTTTCATTCAAGCTTGTTCGCCTATCGGAGAATTACTGAATTTAAACGAGTC
GAATTCAAAATCATTCGATCCATTGTGGATCGCGGGTCTAATTCAGAGTAATAACCCTACTCCTCTTGACGACTCGAATA
CTTCGAAAGAAGACATCGTAAATAAAAATGTCTTAAATGCAAACGTTGACATTCCAGAATGGACTTTATTAGTTGGTGCA
CCTAACGCAAATATTACGGATTCAGCGCTTACAATTGATAGAGATGGATTTATCTACATTGCTGGAAGTACCAACGCCGG
TATTTACAGTGAAAATCTGATTGGAACTAGAGATATTATTCTTGCAAAATACAATTCTCGAAAACAAACAATCTGGACAA
AACAAGTCGGAGTTCGTGGTGTAAGTTTAAATGTCGCCGATGTTGAAGTAGATCAAAGAGGAAACGTTTATGTTATCGGC
AAGACATCTGGTAATTTTGCAGGCCGACTTACAGGGAGACAAGATTTATTTGTAATCAAATTCAATACAAATGGAAATGA
AATCTGGAGAAGACAAAAAGGGTCCAGAAATCAGAACCTTATTCCTGAAAAAGCCTTCGTAGATCAATCCGGAATTTCCT
ATATAGTTGGTATATTATATAGAGAACAAATTATAGGAGAATCAGTAACTGGGTTTCTATTTAAAATAGACAGCCAAGGA
AATTGGCGTAGGGACTTAAGTATTTCAATTCCCGAAGGATCAGTTTATCCTCAAGGGGTCGTTGTTGCAAACAATACAGG
AGATATATTTGTAACTGGAACTACAAATGCAAACTTACAAACCAATAGAGTTCCTAGTACAGGAAATTCTGATCTTTTTA
TTCTTAAATACGATAGAAGTGGAAGAAGGCAACTCTTTGCACAACTCGGTCAAGTTTTGAGTAGAACCGAAAGTAATTCT
ATCGCTTTGGATTCCTTTGGAAACGTTTTTGTAGGCGGGATGAGTAATGCAAATTTCGAACCGGAAGGAGAAGTGGGTGA
AAGTAATCGTGGAATTTTAGTAAAGTATAATTCTCTTGGTGTTCGACAATGGATTCAATATTTAGGACCCATCGACGGTA
ATAGAACTACTGCCATCAACGCACTCTCAATAGATTCGGAGGGAAACATTTTCACAACCGGTCAAAGTAATCATATGGTA
GATGGAAGACAGAATGGGATCGGAATGGATTTATTTTTAACCAAACATGATTCTTTGGGAAACGAAGAATGGGTCCGACA
AATTGGAATCAACAATGCAATGATAATAGGAAATGAAATTGGACAAGATCAACAAGGAAATCTTTATTGTACAGGATGGA
CCGAAGTCTCAATCAATGGAGTTGCTACTCAAGGAAATTCCGATTTATTCCTTTTAAAACTCAGATAG

Upstream 100 bases:

>100_bases
AGAGCCCGGTCCCGCCTTGTTGCATTCAAACTTAATTTTGCTATACATTGGCGGGAGTCGCCAAAGTCGAACTTAATTTA
TTTAGAATAGGAGTTATCTT

Downstream 100 bases:

>100_bases
CATAACATGAGTTAGACGTAAGAAAATCTGGGTGAATCTTGCTTGCCATAAGTAAGCCGAACCGGGCTCTCAAGCTCTGG
TTAATAAATTGTATACAGGA

Product: putative lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 475; Mature: 474

Protein sequence:

>475_residues
MARVYLFIFIFIQACSPIGELLNLNESNSKSFDPLWIAGLIQSNNPTPLDDSNTSKEDIVNKNVLNANVDIPEWTLLVGA
PNANITDSALTIDRDGFIYIAGSTNAGIYSENLIGTRDIILAKYNSRKQTIWTKQVGVRGVSLNVADVEVDQRGNVYVIG
KTSGNFAGRLTGRQDLFVIKFNTNGNEIWRRQKGSRNQNLIPEKAFVDQSGISYIVGILYREQIIGESVTGFLFKIDSQG
NWRRDLSISIPEGSVYPQGVVVANNTGDIFVTGTTNANLQTNRVPSTGNSDLFILKYDRSGRRQLFAQLGQVLSRTESNS
IALDSFGNVFVGGMSNANFEPEGEVGESNRGILVKYNSLGVRQWIQYLGPIDGNRTTAINALSIDSEGNIFTTGQSNHMV
DGRQNGIGMDLFLTKHDSLGNEEWVRQIGINNAMIIGNEIGQDQQGNLYCTGWTEVSINGVATQGNSDLFLLKLR

Sequences:

>Translated_475_residues
MARVYLFIFIFIQACSPIGELLNLNESNSKSFDPLWIAGLIQSNNPTPLDDSNTSKEDIVNKNVLNANVDIPEWTLLVGA
PNANITDSALTIDRDGFIYIAGSTNAGIYSENLIGTRDIILAKYNSRKQTIWTKQVGVRGVSLNVADVEVDQRGNVYVIG
KTSGNFAGRLTGRQDLFVIKFNTNGNEIWRRQKGSRNQNLIPEKAFVDQSGISYIVGILYREQIIGESVTGFLFKIDSQG
NWRRDLSISIPEGSVYPQGVVVANNTGDIFVTGTTNANLQTNRVPSTGNSDLFILKYDRSGRRQLFAQLGQVLSRTESNS
IALDSFGNVFVGGMSNANFEPEGEVGESNRGILVKYNSLGVRQWIQYLGPIDGNRTTAINALSIDSEGNIFTTGQSNHMV
DGRQNGIGMDLFLTKHDSLGNEEWVRQIGINNAMIIGNEIGQDQQGNLYCTGWTEVSINGVATQGNSDLFLLKLR
>Mature_474_residues
ARVYLFIFIFIQACSPIGELLNLNESNSKSFDPLWIAGLIQSNNPTPLDDSNTSKEDIVNKNVLNANVDIPEWTLLVGAP
NANITDSALTIDRDGFIYIAGSTNAGIYSENLIGTRDIILAKYNSRKQTIWTKQVGVRGVSLNVADVEVDQRGNVYVIGK
TSGNFAGRLTGRQDLFVIKFNTNGNEIWRRQKGSRNQNLIPEKAFVDQSGISYIVGILYREQIIGESVTGFLFKIDSQGN
WRRDLSISIPEGSVYPQGVVVANNTGDIFVTGTTNANLQTNRVPSTGNSDLFILKYDRSGRRQLFAQLGQVLSRTESNSI
ALDSFGNVFVGGMSNANFEPEGEVGESNRGILVKYNSLGVRQWIQYLGPIDGNRTTAINALSIDSEGNIFTTGQSNHMVD
GRQNGIGMDLFLTKHDSLGNEEWVRQIGINNAMIIGNEIGQDQQGNLYCTGWTEVSINGVATQGNSDLFLLKLR

Specific function: Unknown

COG id: COG3291

COG function: function code R; FOG: PKD repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52169; Mature: 52038

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARVYLFIFIFIQACSPIGELLNLNESNSKSFDPLWIAGLIQSNNPTPLDDSNTSKEDIV
CCEEEEEHHHHHHHHCCHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHC
NKNVLNANVDIPEWTLLVGAPNANITDSALTIDRDGFIYIAGSTNAGIYSENLIGTRDII
CCCEEECCCCCCCEEEEEECCCCCCCCCEEEEECCCEEEEEECCCCCEEECCCCCCCEEE
LAKYNSRKQTIWTKQVGVRGVSLNVADVEVDQRGNVYVIGKTSGNFAGRLTGRQDLFVIK
EEEECCCCEEEEEHHHCEEEEEEEEEEEEECCCCCEEEEECCCCCCEEEECCCCEEEEEE
FNTNGNEIWRRQKGSRNQNLIPEKAFVDQSGISYIVGILYREQIIGESVTGFLFKIDSQG
EECCCHHHHHHCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCC
NWRRDLSISIPEGSVYPQGVVVANNTGDIFVTGTTNANLQTNRVPSTGNSDLFILKYDRS
CEEEEEEEECCCCCCCCCCEEEECCCCCEEEEECCCCCEEECCCCCCCCCCEEEEEECCC
GRRQLFAQLGQVLSRTESNSIALDSFGNVFVGGMSNANFEPEGEVGESNRGILVKYNSLG
CHHHHHHHHHHHHHHCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCC
VRQWIQYLGPIDGNRTTAINALSIDSEGNIFTTGQSNHMVDGRQNGIGMDLFLTKHDSLG
HHHHHHHHCCCCCCCEEEEEEEEECCCCCEEECCCCCCEECCCCCCCEEEEEEEECCCCC
NEEWVRQIGINNAMIIGNEIGQDQQGNLYCTGWTEVSINGVATQGNSDLFLLKLR
CHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEEEEEEEEEEECCCCCEEEEEEC
>Mature Secondary Structure 
ARVYLFIFIFIQACSPIGELLNLNESNSKSFDPLWIAGLIQSNNPTPLDDSNTSKEDIV
CEEEEEHHHHHHHHCCHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHC
NKNVLNANVDIPEWTLLVGAPNANITDSALTIDRDGFIYIAGSTNAGIYSENLIGTRDII
CCCEEECCCCCCCEEEEEECCCCCCCCCEEEEECCCEEEEEECCCCCEEECCCCCCCEEE
LAKYNSRKQTIWTKQVGVRGVSLNVADVEVDQRGNVYVIGKTSGNFAGRLTGRQDLFVIK
EEEECCCCEEEEEHHHCEEEEEEEEEEEEECCCCCEEEEECCCCCCEEEECCCCEEEEEE
FNTNGNEIWRRQKGSRNQNLIPEKAFVDQSGISYIVGILYREQIIGESVTGFLFKIDSQG
EECCCHHHHHHCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCC
NWRRDLSISIPEGSVYPQGVVVANNTGDIFVTGTTNANLQTNRVPSTGNSDLFILKYDRS
CEEEEEEEECCCCCCCCCCEEEECCCCCEEEEECCCCCEEECCCCCCCCCCEEEEEECCC
GRRQLFAQLGQVLSRTESNSIALDSFGNVFVGGMSNANFEPEGEVGESNRGILVKYNSLG
CHHHHHHHHHHHHHHCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCC
VRQWIQYLGPIDGNRTTAINALSIDSEGNIFTTGQSNHMVDGRQNGIGMDLFLTKHDSLG
HHHHHHHHCCCCCCCEEEEEEEEECCCCCEEECCCCCCEECCCCCCCEEEEEEEECCCCC
NEEWVRQIGINNAMIIGNEIGQDQQGNLYCTGWTEVSINGVATQGNSDLFLLKLR
CHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEEEEEEEEEEECCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA