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The map label for this gene is mhqR [H]

Identifier: 45658865

GI number: 45658865

Start: 3711765

End: 3712214

Strand: Direct

Name: mhqR [H]

Synonym: LIC13039

Alternate gene names: 45658865

Gene position: 3711765-3712214 (Clockwise)

Preceding gene: 45658861

Following gene: 45658866

Centisome position: 86.78

GC content: 37.11

Gene sequence:

>450_bases
ATGGGAACCCACTATAAAGGAAATAGTCGCGAAACAGCGGTTTTAAACGCGTTTATCAAACTCAGCCGGTGTTCCGACTC
AATTCGTCAATTGGAAGAAAAAGTATTTTCTAAGTACGGATTGACCACAGGCCAATTCGGTTGTTTAGAAACTTTACTCC
ATTTAGGTCCCATGTGCCAAAAAGAAATCGGACAAAAGTTATTTTCCTGCGAAGGCAACATTACTCAGATCGTCGATAAC
CTCGAAAAAAGAAAATTAGTACAAAGAGTTAGAAGCGAAGAAGACAGACGTTATATCATCATTCATCTAACTTCCGAGGG
GAAAAAACTCATTCAGAAAGCGTTTCCCGATTTATTAAATTCTTTAGTTCACAAGTTCGGAAATTTATCGGAAAACCAAC
TTTTGGATTTAGGAGATTTTTGTAAGGAAATCGGATTAAAAACGATATGA

Upstream 100 bases:

>100_bases
TTCCAAAACATAGAAACCACAAATAGAAACAATCTTGAATTCAAAAATTCCTTGACTGTCAAAGTAGTTTGAAATTAAAT
AGTTTAAATTTAAAGTATTT

Downstream 100 bases:

>100_bases
ATCCTTTACTTATCCAGAAAAAAAATATTAAAACTAATACATTGATTTTAGAATTTTTATAAGAATGAATCCTAATACTT
CGAATCAAAATAGTTTAATA

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MGTHYKGNSRETAVLNAFIKLSRCSDSIRQLEEKVFSKYGLTTGQFGCLETLLHLGPMCQKEIGQKLFSCEGNITQIVDN
LEKRKLVQRVRSEEDRRYIIIHLTSEGKKLIQKAFPDLLNSLVHKFGNLSENQLLDLGDFCKEIGLKTI

Sequences:

>Translated_149_residues
MGTHYKGNSRETAVLNAFIKLSRCSDSIRQLEEKVFSKYGLTTGQFGCLETLLHLGPMCQKEIGQKLFSCEGNITQIVDN
LEKRKLVQRVRSEEDRRYIIIHLTSEGKKLIQKAFPDLLNSLVHKFGNLSENQLLDLGDFCKEIGLKTI
>Mature_148_residues
GTHYKGNSRETAVLNAFIKLSRCSDSIRQLEEKVFSKYGLTTGQFGCLETLLHLGPMCQKEIGQKLFSCEGNITQIVDNL
EKRKLVQRVRSEEDRRYIIIHLTSEGKKLIQKAFPDLLNSLVHKFGNLSENQLLDLGDFCKEIGLKTI

Specific function: Negatively regulates mhqA, mhqED, mhqNOP, and azoR2 which may contribute to the degradation of aromatic compounds [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16960; Mature: 16829

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTHYKGNSRETAVLNAFIKLSRCSDSIRQLEEKVFSKYGLTTGQFGCLETLLHLGPMCQ
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHH
KEIGQKLFSCEGNITQIVDNLEKRKLVQRVRSEEDRRYIIIHLTSEGKKLIQKAFPDLLN
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHH
SLVHKFGNLSENQLLDLGDFCKEIGLKTI
HHHHHHCCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
GTHYKGNSRETAVLNAFIKLSRCSDSIRQLEEKVFSKYGLTTGQFGCLETLLHLGPMCQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHH
KEIGQKLFSCEGNITQIVDNLEKRKLVQRVRSEEDRRYIIIHLTSEGKKLIQKAFPDLLN
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHH
SLVHKFGNLSENQLLDLGDFCKEIGLKTI
HHHHHHCCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]