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The map label for this gene is ybbC [H]

Identifier: 45658849

GI number: 45658849

Start: 3683396

End: 3684571

Strand: Direct

Name: ybbC [H]

Synonym: LIC13022

Alternate gene names: 45658849

Gene position: 3683396-3684571 (Clockwise)

Preceding gene: 304570503

Following gene: 45658850

Centisome position: 86.12

GC content: 33.5

Gene sequence:

>1176_bases
ATGCCTCTTAAAGAGTATATCGGAAGAATGAATAAAATTGAAAAGTTGCTTCAGACTTCCAGAATTGGTATGATCACCAA
TCAAAGCGCTTTCGGACCAGATGGAGAATATCACTTTCAATCCATTCACAAACGTTACGATCTAAAGAAAATATTCCTCC
CAGAACACGGACTTTTTGCAGAACTTCAAGATCAGGTTTCCGGTTCCAGTCTGAGATATAATCTAGATGAAGTAGAATTT
ATCAATCTTTACGGAGATCAAGAATCTAGTTTGATTCCAGATTCGGTTTCTTTAGAAGGATTAGACATAGTCATCATAGA
CATTAGAGATACTGGAGCACGTTATTATACTTTTCTTACAACTGCTTATTATTTTTTAGAAGAAATTTCTAAATGGAATT
CTTCAGGAAAAAATGAAATTTCAGTAATTATTTTTGATTCTACCAATCCTGCAGGAAAAAAAATCGAAGGTTCTCCTCTT
CAAAAAGAATTTGAATCTTTTGTAGGAGTGAGAGGTGTTTTACATCGTCATGGTTTGACCCCTGGAAAATTACTTTCTTA
TTATCAGAAAGAATTTCATTTAAACGTAAAGATCAGAATCGTAAATAAAGGATGGTATAAAAAGAAAGATTCAGAATTTA
GTTGGATTCCACCTTCTCCCAATATTCCATTTCGCTCAACTTGTTATGTTTATTCTGGTCAATGTCTTTTGGAAGGAACC
AATCTTTCTGAAGGCAGAGGAACTACAAGACCTTTTGAAACTTTTGGAGCTCCTTATATAAATGAAGAAAACATTCGTAT
TCGAAAAGTTTTAGAAGAATCTCAAGGAGGAAGTTTGATCTTAAGACCTTTGAAATTTATTCCTACCTTTCACAAACATA
AGGATCTAGTCTGTGGTGGTTTTCAAATTTTGTTAAAAAAACCAGAGAAGTTTCACAGTCTATTTTTTACCCTAAAGCTG
ATTCGTACACTCAGCGAAGAATATCCAAATGATTTTGCTTATAGAGCAGGTGCATACGAATTCAGATCGGATCGTTCCGC
AATCGAACTTTTGGTTGGAGATCGTTTTCTTTTGGATTATTTAAAGGGAAAACATTCTGATTCCATTGTATTCCAATATT
TGAATGAACAAGAACGCACTTGGAAAAGAAAATGTAAAGAGATGGAATTATTTTAA

Upstream 100 bases:

>100_bases
ATTTCTTATCCATAGAGAAAACAATTTTTTAGAAAGGGAATTAAAAAACCGTTCTGAATCTGCTACTTTTAAGTGTAATT
CTCGTTAAACTTGACTCCTT

Downstream 100 bases:

>100_bases
GAACCGACGCGTTCAGCTTCTCTAAAAACTCAGAACTTTTTAATTTTGAATCGATTATAACCTTAAATTCTCATCTTTGT
ATGAAATTGCCTTTTTGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MPLKEYIGRMNKIEKLLQTSRIGMITNQSAFGPDGEYHFQSIHKRYDLKKIFLPEHGLFAELQDQVSGSSLRYNLDEVEF
INLYGDQESSLIPDSVSLEGLDIVIIDIRDTGARYYTFLTTAYYFLEEISKWNSSGKNEISVIIFDSTNPAGKKIEGSPL
QKEFESFVGVRGVLHRHGLTPGKLLSYYQKEFHLNVKIRIVNKGWYKKKDSEFSWIPPSPNIPFRSTCYVYSGQCLLEGT
NLSEGRGTTRPFETFGAPYINEENIRIRKVLEESQGGSLILRPLKFIPTFHKHKDLVCGGFQILLKKPEKFHSLFFTLKL
IRTLSEEYPNDFAYRAGAYEFRSDRSAIELLVGDRFLLDYLKGKHSDSIVFQYLNEQERTWKRKCKEMELF

Sequences:

>Translated_391_residues
MPLKEYIGRMNKIEKLLQTSRIGMITNQSAFGPDGEYHFQSIHKRYDLKKIFLPEHGLFAELQDQVSGSSLRYNLDEVEF
INLYGDQESSLIPDSVSLEGLDIVIIDIRDTGARYYTFLTTAYYFLEEISKWNSSGKNEISVIIFDSTNPAGKKIEGSPL
QKEFESFVGVRGVLHRHGLTPGKLLSYYQKEFHLNVKIRIVNKGWYKKKDSEFSWIPPSPNIPFRSTCYVYSGQCLLEGT
NLSEGRGTTRPFETFGAPYINEENIRIRKVLEESQGGSLILRPLKFIPTFHKHKDLVCGGFQILLKKPEKFHSLFFTLKL
IRTLSEEYPNDFAYRAGAYEFRSDRSAIELLVGDRFLLDYLKGKHSDSIVFQYLNEQERTWKRKCKEMELF
>Mature_390_residues
PLKEYIGRMNKIEKLLQTSRIGMITNQSAFGPDGEYHFQSIHKRYDLKKIFLPEHGLFAELQDQVSGSSLRYNLDEVEFI
NLYGDQESSLIPDSVSLEGLDIVIIDIRDTGARYYTFLTTAYYFLEEISKWNSSGKNEISVIIFDSTNPAGKKIEGSPLQ
KEFESFVGVRGVLHRHGLTPGKLLSYYQKEFHLNVKIRIVNKGWYKKKDSEFSWIPPSPNIPFRSTCYVYSGQCLLEGTN
LSEGRGTTRPFETFGAPYINEENIRIRKVLEESQGGSLILRPLKFIPTFHKHKDLVCGGFQILLKKPEKFHSLFFTLKLI
RTLSEEYPNDFAYRAGAYEFRSDRSAIELLVGDRFLLDYLKGKHSDSIVFQYLNEQERTWKRKCKEMELF

Specific function: Unknown

COG id: COG3876

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008302 [H]

Pfam domain/function: PF07075 DUF1343 [H]

EC number: NA

Molecular weight: Translated: 45322; Mature: 45191

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLKEYIGRMNKIEKLLQTSRIGMITNQSAFGPDGEYHFQSIHKRYDLKKIFLPEHGLFA
CCHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCHH
ELQDQVSGSSLRYNLDEVEFINLYGDQESSLIPDSVSLEGLDIVIIDIRDTGARYYTFLT
HHHHHCCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHH
TAYYFLEEISKWNSSGKNEISVIIFDSTNPAGKKIEGSPLQKEFESFVGVRGVLHRHGLT
HHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
PGKLLSYYQKEFHLNVKIRIVNKGWYKKKDSEFSWIPPSPNIPFRSTCYVYSGQCLLEGT
HHHHHHHHHHHEEEEEEEEEEECCCCCCCCCCCEECCCCCCCCCCEEEEEEECEEEEECC
NLSEGRGTTRPFETFGAPYINEENIRIRKVLEESQGGSLILRPLKFIPTFHKHKDLVCGG
CCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEEHHHHCCCHHCCCCEEECC
FQILLKKPEKFHSLFFTLKLIRTLSEEYPNDFAYRAGAYEFRSDRSAIELLVGDRFLLDY
HHHECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHCCCCHHHHHHCCHHHHHH
LKGKHSDSIVFQYLNEQERTWKRKCKEMELF
HCCCCCCHHHHHHHCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PLKEYIGRMNKIEKLLQTSRIGMITNQSAFGPDGEYHFQSIHKRYDLKKIFLPEHGLFA
CHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCHH
ELQDQVSGSSLRYNLDEVEFINLYGDQESSLIPDSVSLEGLDIVIIDIRDTGARYYTFLT
HHHHHCCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHH
TAYYFLEEISKWNSSGKNEISVIIFDSTNPAGKKIEGSPLQKEFESFVGVRGVLHRHGLT
HHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
PGKLLSYYQKEFHLNVKIRIVNKGWYKKKDSEFSWIPPSPNIPFRSTCYVYSGQCLLEGT
HHHHHHHHHHHEEEEEEEEEEECCCCCCCCCCCEECCCCCCCCCCEEEEEEECEEEEECC
NLSEGRGTTRPFETFGAPYINEENIRIRKVLEESQGGSLILRPLKFIPTFHKHKDLVCGG
CCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEEHHHHCCCHHCCCCEEECC
FQILLKKPEKFHSLFFTLKLIRTLSEEYPNDFAYRAGAYEFRSDRSAIELLVGDRFLLDY
HHHECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHCCCCHHHHHHCCHHHHHH
LKGKHSDSIVFQYLNEQERTWKRKCKEMELF
HCCCCCCHHHHHHHCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8011666; 9274029; 9384377 [H]