Click here to switch to the map view.

The map label for this gene is 45658848

Identifier: 45658848

GI number: 45658848

Start: 3680746

End: 3683319

Strand: Reverse

Name: 45658848

Synonym: LIC13021

Alternate gene names: NA

Gene position: 3683319-3680746 (Counterclockwise)

Preceding gene: 45658853

Following gene: 45658846

Centisome position: 86.12

GC content: 38.62

Gene sequence:

>2574_bases
TTGTTTTCTCTATGGATAAGAAATAGTTTCTTTTTCATTAATTTCAATATGGCATTTGATCCCTCCGTTCCACAACAACA
AGCCCAAGCCCCCGCGGGAACTTTATTGTTTCCAGAAGGTTCTTCCGCAAATACTCTAAACGTACTTCATAGTGGAACGG
TTCGTTATTTGACCGAAGTTCCAGGTGGTAGAAAACTAGAACTTTTTAAACTGAATGGAGCCAATTTGACTCCTGGATCT
GTGGCTCTTTTTACGAGTGGCAGATATCCGTTTCATCTTCAAGCGGAAGAAGCCTGCGTCATTTCTACTTATGCGATGAA
TCGAGATACGATCTCTAAAAGTGTAGGTTCTCGTGTTTCTTTAGGGCTCATGGTCGCAAGGACACTACTTCGAGAAATCA
CAGAACTTTTTAAAAAATCCAACCAGATCCGAAAAATTACCTCTGAAATTGAAAAGGTAAACGACAATCTATCGATTTTA
TATTATCAGTTCAATCCAAGTGTATTTCCAGACATTAAACCTGGTTCTCCAATTCCAGAGGTTTCAGCTGATGTAGTAGA
TCCGGTTATGCGTCTTTGTAGAGAGAACTTGAAGTTATTCTTTGATAACGGAGGTATTCTACCAGATAGACCTAGTCCTC
AATTTTTAGAGGAAGAACACGAATCTCAACTTACAAGACTTTACCCCGAAGAAATCGATTTTCAAGACGGAGAATTCAAT
TTCATTCGCAAGTTGGTAATGCAAGATCCTAAAATCCTAAATGTATTATTTACCGCAGATCCTTCTATGCTTGCCTATGT
TTGTTCTAAACTGGCGAACGTGTTGGATCAAATTTCTGGAATTCTTAAGACTTGTCTTACTGATCTGGACGAGGCATTTC
GTATCTTTTTTATTGGTGAAAATAGTCTCGTAGAAAAATTCTATCTCATTTTAGATATTACTTCTTCTGGTTACGGCACT
GCTCCCGCAGAATTCGTAATACCTGTGTTAGGTGCTTTTGCGGGCAAAATCGAAAAATATAAAAACGGACATCAGGCTCT
TTTCGGTGTTCCTGTGGCGAATATTTCTCCCAACACACAAGCGTTTCAATCCAAAGCAGTTACACTTGCGAAAAAAATGG
AAGAAACCGCTCCTAAAGTTCAAGCTCCCGTTACTTCTTCCGCAACGGCAGGAGTGGACGTTGACGCGATTCGTAAAGAA
TTAGACAATTCTGCATCCGTTATCATTCAATTTTCTGGTTTGGGAGCGGAACAGATAAAAGAATTTTCCGCTCTTATGGT
AAAGGTGAAAAGTTTAAAAAACCCTCTCGATCCGGAAGGTGACAATAGAAAGGTCAGAAGGACTTTGGGAAGACATTATT
GGGATATGTACCAGGAATGTTTTACGAAATACATGAGCTCTAACCGAAACGTTCCTAAACCAGTTGAACTCATGTTAAAG
TACGGTTATTTCGATGAAACGTTGGTGGACGATTCTCAGATTGCCTTTATGTACACTCAAAAAGATCCAGCTAACTTTAC
TTCCAACGTTCCTATTTCACTTGGAACTGAATGGTTGGAGAAGGTATTTAAAAGGGAAGTTCCAACTTCTTTGGACGAAA
TGGGGCAAAACTTTTTTGAGAAGGTAAAACTTGAAAATAGAAATATAGTGATCAAAAAAGAATCGGATATTCCGCCTGAG
TTAGACAATCCGGACACTAGACTCAAGTTCGAGTTTGCTTCCCTTTATGAAGCAAATGTTAGACTTACCTCGGGTAGTCC
GGCGACCCACTTTCCGATTTTGACTAAGTTTCATAGTCAGATGGCGATTGATAAATCCTATGTTTCCAAAAAGATTTTGG
AAGAAGTAGTTCACGAGTTGATGGCGGTAGACTATTCTATTTTCCATAGAGAAGTAATTTATAATAATAACGAATTAGGA
ATTACTAAAGAATTTATTCAAAAATGTGTAATCCCTGATTTTATCTTAGTTCCTTCCATCGGAACCAAAGTAATGATGTG
GCAGGATCTTTCCATTCACAGAGGAGCTGGCTCTAAAGAAAGTCCCGGAAGAATTGTACTTCCTATCTTTGCGCAAGGGG
ATTTGAAAACGATGGTTGCGGATGCTCTGGCTGCGTTTCGATGGGAACTCACCAAATCCATTTTAGGCGCCGAGTGGAAT
AACGTGGGTAATCCTTCGATTACTGCAGATTACACGGATTATATTCAATTTTTTAAGAAAAATAAAGATCTTTCAATGGA
GATCAAAGAGAAGTTGGCCTCCGACTTTAAACGTTTTAGAAATGATAGGGATATATTTGCAAATGATTATCAACTCTGGA
TGAAATACGAAGCGGACGGTGTTCAGAGACTTAACAAAGTAGTTCGTGGAATTTTTTACAGACACATTCCTTTTAGTAAA
CAAGTTCGAGATAAAGTGGCTAAAACTCCTGCCTTTGCAGAGATCCATAACCGATTTATTAATATTAGAAATCGAAAATA
TACTGAAATAGAAAATCGTTATAAAAAGTATCTCAACGCTTTGGGTAGCCTCCCGGACCCTCTACGTGAGAACTTGGAAT
TCTTTAGAGTCTAA

Upstream 100 bases:

>100_bases
TCCGATATACTCTTTAAGAGGCATAAGGAGTCAAGTTTAACGAGAATTACACTTAAAAGTAGCAGATTCAGAACGGTTTT
TTAATTCCCTTTCTAAAAAA

Downstream 100 bases:

>100_bases
ATTTTGAAATCTAATTCTTTCAAATTGAGTCTGATCTTTTGTTGAAAAATCAGTGAAAGCTTGTTTGGCTTTTCCGTTTT
CAAAATCACTTTCAATTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 857; Mature: 857

Protein sequence:

>857_residues
MFSLWIRNSFFFINFNMAFDPSVPQQQAQAPAGTLLFPEGSSANTLNVLHSGTVRYLTEVPGGRKLELFKLNGANLTPGS
VALFTSGRYPFHLQAEEACVISTYAMNRDTISKSVGSRVSLGLMVARTLLREITELFKKSNQIRKITSEIEKVNDNLSIL
YYQFNPSVFPDIKPGSPIPEVSADVVDPVMRLCRENLKLFFDNGGILPDRPSPQFLEEEHESQLTRLYPEEIDFQDGEFN
FIRKLVMQDPKILNVLFTADPSMLAYVCSKLANVLDQISGILKTCLTDLDEAFRIFFIGENSLVEKFYLILDITSSGYGT
APAEFVIPVLGAFAGKIEKYKNGHQALFGVPVANISPNTQAFQSKAVTLAKKMEETAPKVQAPVTSSATAGVDVDAIRKE
LDNSASVIIQFSGLGAEQIKEFSALMVKVKSLKNPLDPEGDNRKVRRTLGRHYWDMYQECFTKYMSSNRNVPKPVELMLK
YGYFDETLVDDSQIAFMYTQKDPANFTSNVPISLGTEWLEKVFKREVPTSLDEMGQNFFEKVKLENRNIVIKKESDIPPE
LDNPDTRLKFEFASLYEANVRLTSGSPATHFPILTKFHSQMAIDKSYVSKKILEEVVHELMAVDYSIFHREVIYNNNELG
ITKEFIQKCVIPDFILVPSIGTKVMMWQDLSIHRGAGSKESPGRIVLPIFAQGDLKTMVADALAAFRWELTKSILGAEWN
NVGNPSITADYTDYIQFFKKNKDLSMEIKEKLASDFKRFRNDRDIFANDYQLWMKYEADGVQRLNKVVRGIFYRHIPFSK
QVRDKVAKTPAFAEIHNRFINIRNRKYTEIENRYKKYLNALGSLPDPLRENLEFFRV

Sequences:

>Translated_857_residues
MFSLWIRNSFFFINFNMAFDPSVPQQQAQAPAGTLLFPEGSSANTLNVLHSGTVRYLTEVPGGRKLELFKLNGANLTPGS
VALFTSGRYPFHLQAEEACVISTYAMNRDTISKSVGSRVSLGLMVARTLLREITELFKKSNQIRKITSEIEKVNDNLSIL
YYQFNPSVFPDIKPGSPIPEVSADVVDPVMRLCRENLKLFFDNGGILPDRPSPQFLEEEHESQLTRLYPEEIDFQDGEFN
FIRKLVMQDPKILNVLFTADPSMLAYVCSKLANVLDQISGILKTCLTDLDEAFRIFFIGENSLVEKFYLILDITSSGYGT
APAEFVIPVLGAFAGKIEKYKNGHQALFGVPVANISPNTQAFQSKAVTLAKKMEETAPKVQAPVTSSATAGVDVDAIRKE
LDNSASVIIQFSGLGAEQIKEFSALMVKVKSLKNPLDPEGDNRKVRRTLGRHYWDMYQECFTKYMSSNRNVPKPVELMLK
YGYFDETLVDDSQIAFMYTQKDPANFTSNVPISLGTEWLEKVFKREVPTSLDEMGQNFFEKVKLENRNIVIKKESDIPPE
LDNPDTRLKFEFASLYEANVRLTSGSPATHFPILTKFHSQMAIDKSYVSKKILEEVVHELMAVDYSIFHREVIYNNNELG
ITKEFIQKCVIPDFILVPSIGTKVMMWQDLSIHRGAGSKESPGRIVLPIFAQGDLKTMVADALAAFRWELTKSILGAEWN
NVGNPSITADYTDYIQFFKKNKDLSMEIKEKLASDFKRFRNDRDIFANDYQLWMKYEADGVQRLNKVVRGIFYRHIPFSK
QVRDKVAKTPAFAEIHNRFINIRNRKYTEIENRYKKYLNALGSLPDPLRENLEFFRV
>Mature_857_residues
MFSLWIRNSFFFINFNMAFDPSVPQQQAQAPAGTLLFPEGSSANTLNVLHSGTVRYLTEVPGGRKLELFKLNGANLTPGS
VALFTSGRYPFHLQAEEACVISTYAMNRDTISKSVGSRVSLGLMVARTLLREITELFKKSNQIRKITSEIEKVNDNLSIL
YYQFNPSVFPDIKPGSPIPEVSADVVDPVMRLCRENLKLFFDNGGILPDRPSPQFLEEEHESQLTRLYPEEIDFQDGEFN
FIRKLVMQDPKILNVLFTADPSMLAYVCSKLANVLDQISGILKTCLTDLDEAFRIFFIGENSLVEKFYLILDITSSGYGT
APAEFVIPVLGAFAGKIEKYKNGHQALFGVPVANISPNTQAFQSKAVTLAKKMEETAPKVQAPVTSSATAGVDVDAIRKE
LDNSASVIIQFSGLGAEQIKEFSALMVKVKSLKNPLDPEGDNRKVRRTLGRHYWDMYQECFTKYMSSNRNVPKPVELMLK
YGYFDETLVDDSQIAFMYTQKDPANFTSNVPISLGTEWLEKVFKREVPTSLDEMGQNFFEKVKLENRNIVIKKESDIPPE
LDNPDTRLKFEFASLYEANVRLTSGSPATHFPILTKFHSQMAIDKSYVSKKILEEVVHELMAVDYSIFHREVIYNNNELG
ITKEFIQKCVIPDFILVPSIGTKVMMWQDLSIHRGAGSKESPGRIVLPIFAQGDLKTMVADALAAFRWELTKSILGAEWN
NVGNPSITADYTDYIQFFKKNKDLSMEIKEKLASDFKRFRNDRDIFANDYQLWMKYEADGVQRLNKVVRGIFYRHIPFSK
QVRDKVAKTPAFAEIHNRFINIRNRKYTEIENRYKKYLNALGSLPDPLRENLEFFRV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 97422; Mature: 97422

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSLWIRNSFFFINFNMAFDPSVPQQQAQAPAGTLLFPEGSSANTLNVLHSGTVRYLTEV
CEEEEEECEEEEEEEEEEECCCCCHHHHCCCCCEEEECCCCCCCEEEEECCCHHHHHHCC
PGGRKLELFKLNGANLTPGSVALFTSGRYPFHLQAEEACVISTYAMNRDTISKSVGSRVS
CCCCEEEEEEECCCCCCCCCEEEEECCCCCEEECCCCCEEEEEECCCHHHHHHHHCCHHH
LGLMVARTLLREITELFKKSNQIRKITSEIEKVNDNLSILYYQFNPSVFPDIKPGSPIPE
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCC
VSADVVDPVMRLCRENLKLFFDNGGILPDRPSPQFLEEEHESQLTRLYPEEIDFQDGEFN
CHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCHHHCCCCCCHHH
FIRKLVMQDPKILNVLFTADPSMLAYVCSKLANVLDQISGILKTCLTDLDEAFRIFFIGE
HHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECC
NSLVEKFYLILDITSSGYGTAPAEFVIPVLGAFAGKIEKYKNGHQALFGVPVANISPNTQ
CHHHEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECEECCCCCCHH
AFQSKAVTLAKKMEETAPKVQAPVTSSATAGVDVDAIRKELDNSASVIIQFSGLGAEQIK
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEECCCHHHHH
EFSALMVKVKSLKNPLDPEGDNRKVRRTLGRHYWDMYQECFTKYMSSNRNVPKPVELMLK
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
YGYFDETLVDDSQIAFMYTQKDPANFTSNVPISLGTEWLEKVFKREVPTSLDEMGQNFFE
HCCCCHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHH
KVKLENRNIVIKKESDIPPELDNPDTRLKFEFASLYEANVRLTSGSPATHFPILTKFHSQ
HHHCCCCEEEEEECCCCCCCCCCCCCEEEEEHHHHEECCEEEECCCCCCCCHHHHHHHHH
MAIDKSYVSKKILEEVVHELMAVDYSIFHREVIYNNNELGITKEFIQKCVIPDFILVPSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHCCCCEEEECCC
GTKVMMWQDLSIHRGAGSKESPGRIVLPIFAQGDLKTMVADALAAFRWELTKSILGAEWN
CCEEEEEECCCEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
NVGNPSITADYTDYIQFFKKNKDLSMEIKEKLASDFKRFRNDRDIFANDYQLWMKYEADG
CCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEECCCEEEEEEECHHH
VQRLNKVVRGIFYRHIPFSKQVRDKVAKTPAFAEIHNRFINIRNRKYTEIENRYKKYLNA
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LGSLPDPLRENLEFFRV
HCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MFSLWIRNSFFFINFNMAFDPSVPQQQAQAPAGTLLFPEGSSANTLNVLHSGTVRYLTEV
CEEEEEECEEEEEEEEEEECCCCCHHHHCCCCCEEEECCCCCCCEEEEECCCHHHHHHCC
PGGRKLELFKLNGANLTPGSVALFTSGRYPFHLQAEEACVISTYAMNRDTISKSVGSRVS
CCCCEEEEEEECCCCCCCCCEEEEECCCCCEEECCCCCEEEEEECCCHHHHHHHHCCHHH
LGLMVARTLLREITELFKKSNQIRKITSEIEKVNDNLSILYYQFNPSVFPDIKPGSPIPE
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCC
VSADVVDPVMRLCRENLKLFFDNGGILPDRPSPQFLEEEHESQLTRLYPEEIDFQDGEFN
CHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCHHHCCCCCCHHH
FIRKLVMQDPKILNVLFTADPSMLAYVCSKLANVLDQISGILKTCLTDLDEAFRIFFIGE
HHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECC
NSLVEKFYLILDITSSGYGTAPAEFVIPVLGAFAGKIEKYKNGHQALFGVPVANISPNTQ
CHHHEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECEECCCCCCHH
AFQSKAVTLAKKMEETAPKVQAPVTSSATAGVDVDAIRKELDNSASVIIQFSGLGAEQIK
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEECCCHHHHH
EFSALMVKVKSLKNPLDPEGDNRKVRRTLGRHYWDMYQECFTKYMSSNRNVPKPVELMLK
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
YGYFDETLVDDSQIAFMYTQKDPANFTSNVPISLGTEWLEKVFKREVPTSLDEMGQNFFE
HCCCCHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHH
KVKLENRNIVIKKESDIPPELDNPDTRLKFEFASLYEANVRLTSGSPATHFPILTKFHSQ
HHHCCCCEEEEEECCCCCCCCCCCCCEEEEEHHHHEECCEEEECCCCCCCCHHHHHHHHH
MAIDKSYVSKKILEEVVHELMAVDYSIFHREVIYNNNELGITKEFIQKCVIPDFILVPSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHCCCCEEEECCC
GTKVMMWQDLSIHRGAGSKESPGRIVLPIFAQGDLKTMVADALAAFRWELTKSILGAEWN
CCEEEEEECCCEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
NVGNPSITADYTDYIQFFKKNKDLSMEIKEKLASDFKRFRNDRDIFANDYQLWMKYEADG
CCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEECCCEEEEEEECHHH
VQRLNKVVRGIFYRHIPFSKQVRDKVAKTPAFAEIHNRFINIRNRKYTEIENRYKKYLNA
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LGSLPDPLRENLEFFRV
HCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA