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The map label for this gene is yahD [C]

Identifier: 45658837

GI number: 45658837

Start: 3663228

End: 3664301

Strand: Direct

Name: yahD [C]

Synonym: LIC13010

Alternate gene names: 45658837

Gene position: 3663228-3664301 (Clockwise)

Preceding gene: 45658833

Following gene: 45658839

Centisome position: 85.65

GC content: 41.25

Gene sequence:

>1074_bases
ATGAAAATCTTGTTTAGAATGATGATAACGATCTTGATGGCCGCTCAGATGGATTGCGCCACAATTCAAATGCTTGAAGA
CGCCCAATTTTTACCCACACCCGTTTGGTCCATGGCAAGATACGCAGATAAAACCATCTCTCCGGAACTGTCTAAAAATC
CTAACGTCTGGAATCCTCCCCTCTGGATTTATCCAGGGACACGACGCTACTGGATGACTGGTATCAATAAGAATTTTCCT
TTTAGTGTTATTGATCTTACTTTGTCCTTCTTGGCGGATACGATCCTACTTCCTATTACAATTCCGTTGACGGCATACTA
CTATTGGAGAGTTCCCGAGGCCTGGGAGTCAGGCCTTCTGATCGGAAGTATCGAGAACAACGATCTATCCGGAGTTCGCC
GATGCATCGAGACTGGCGCGGATGTAAATTCCACATTCATTGGTCCACCTCCATTGTATTTTGCTATTAAGAACGAGAAC
GTTGAAATTGTGAGACTCCTCTTAGAGAAAGGCGCCGATGTGAATTTCCAAAACAACACCTTCTATGATCAATCTTTATT
GTATTTTGCTATTGAGAAAGAGAACACTGAAATCGTTGAGCTTCTTTTAAAAAAAGGCGCCGATGCAAATGCAAAGAGTT
GCGATCTTTTTCGCCGTTGTAATTATCTATTCTTCAAAGTAATAGAACGCTATTCTAATCTTTCCCCAAAAAAAGATAAA
AGACCCGAAATTGTCAGACTGCTCTTAGAAAAGGGAGGAGCCGATGTCAATGCTACTTTGGCGGAAGACGGAACAAGTCC
TCTACACTACGCAGTGGAGAAAAAACATAATATTCAAATTGTAAAACAATTAGTAGAACACGGCGCCAACGTAAACGGTA
AAGATGTTTATCAGCAGACCCCACTGTATGATGTAGCCTCAAAAGAAATCGCACAATATCTTTTGCAACAAGGCGCAGAT
CCAACCGTAAAAAACAGCACTGGGGAAACCCCTTTGGAACGTGCAAAATATCTAATGAACTTAGACAGAAAAAATAATTA
TGATGCACTTAAGTTTCTTGAAGACACTCCCTAA

Upstream 100 bases:

>100_bases
CTTAGAAAGTTTTACGCCAGACTTACAAAATATAAGAATACAAAAACAGATTGAATCGGACTGGATGGAGCAATCCAATA
TAATTGGGAACAAATAGAAA

Downstream 100 bases:

>100_bases
TTGCCAACAGATATTTTTAACAAATCCGTTCTTAAAGAGTTATTGAAAAACTAATTCTCCATCGGCGTTCATCGTATTGA
AATGCACAATTGAAGCAATT

Product: ankyrin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MKILFRMMITILMAAQMDCATIQMLEDAQFLPTPVWSMARYADKTISPELSKNPNVWNPPLWIYPGTRRYWMTGINKNFP
FSVIDLTLSFLADTILLPITIPLTAYYYWRVPEAWESGLLIGSIENNDLSGVRRCIETGADVNSTFIGPPPLYFAIKNEN
VEIVRLLLEKGADVNFQNNTFYDQSLLYFAIEKENTEIVELLLKKGADANAKSCDLFRRCNYLFFKVIERYSNLSPKKDK
RPEIVRLLLEKGGADVNATLAEDGTSPLHYAVEKKHNIQIVKQLVEHGANVNGKDVYQQTPLYDVASKEIAQYLLQQGAD
PTVKNSTGETPLERAKYLMNLDRKNNYDALKFLEDTP

Sequences:

>Translated_357_residues
MKILFRMMITILMAAQMDCATIQMLEDAQFLPTPVWSMARYADKTISPELSKNPNVWNPPLWIYPGTRRYWMTGINKNFP
FSVIDLTLSFLADTILLPITIPLTAYYYWRVPEAWESGLLIGSIENNDLSGVRRCIETGADVNSTFIGPPPLYFAIKNEN
VEIVRLLLEKGADVNFQNNTFYDQSLLYFAIEKENTEIVELLLKKGADANAKSCDLFRRCNYLFFKVIERYSNLSPKKDK
RPEIVRLLLEKGGADVNATLAEDGTSPLHYAVEKKHNIQIVKQLVEHGANVNGKDVYQQTPLYDVASKEIAQYLLQQGAD
PTVKNSTGETPLERAKYLMNLDRKNNYDALKFLEDTP
>Mature_357_residues
MKILFRMMITILMAAQMDCATIQMLEDAQFLPTPVWSMARYADKTISPELSKNPNVWNPPLWIYPGTRRYWMTGINKNFP
FSVIDLTLSFLADTILLPITIPLTAYYYWRVPEAWESGLLIGSIENNDLSGVRRCIETGADVNSTFIGPPPLYFAIKNEN
VEIVRLLLEKGADVNFQNNTFYDQSLLYFAIEKENTEIVELLLKKGADANAKSCDLFRRCNYLFFKVIERYSNLSPKKDK
RPEIVRLLLEKGGADVNATLAEDGTSPLHYAVEKKHNIQIVKQLVEHGANVNGKDVYQQTPLYDVASKEIAQYLLQQGAD
PTVKNSTGETPLERAKYLMNLDRKNNYDALKFLEDTP

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 18 ANK repeats [H]

Homologues:

Organism=Homo sapiens, GI68131557, Length=243, Percent_Identity=31.2757201646091, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI87239981, Length=249, Percent_Identity=31.3253012048193, Blast_Score=76, Evalue=5e-14,
Organism=Homo sapiens, GI70780355, Length=231, Percent_Identity=31.1688311688312, Blast_Score=76, Evalue=6e-14,
Organism=Homo sapiens, GI70780353, Length=220, Percent_Identity=30.9090909090909, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI70780359, Length=220, Percent_Identity=30.9090909090909, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI70780357, Length=220, Percent_Identity=30.9090909090909, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI215598574, Length=220, Percent_Identity=30.9090909090909, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI164664508, Length=356, Percent_Identity=25.561797752809, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI13376842, Length=205, Percent_Identity=32.1951219512195, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI18252778, Length=225, Percent_Identity=29.7777777777778, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI13129098, Length=182, Percent_Identity=34.6153846153846, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI41327754, Length=188, Percent_Identity=30.3191489361702, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI163914396, Length=197, Percent_Identity=31.9796954314721, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI7705748, Length=197, Percent_Identity=31.9796954314721, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI188595682, Length=210, Percent_Identity=30, Blast_Score=69, Evalue=8e-12,
Organism=Homo sapiens, GI52426735, Length=210, Percent_Identity=30, Blast_Score=69, Evalue=9e-12,
Organism=Homo sapiens, GI52426737, Length=210, Percent_Identity=30, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI10863929, Length=233, Percent_Identity=30.0429184549356, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI38683816, Length=209, Percent_Identity=32.0574162679426, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI38683807, Length=209, Percent_Identity=32.0574162679426, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI32967601, Length=244, Percent_Identity=27.0491803278689, Blast_Score=67, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI71981389, Length=231, Percent_Identity=30.3030303030303, Blast_Score=78, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI25145251, Length=231, Percent_Identity=30.3030303030303, Blast_Score=78, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17542700, Length=231, Percent_Identity=30.3030303030303, Blast_Score=78, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI71981414, Length=221, Percent_Identity=30.7692307692308, Blast_Score=78, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI71981411, Length=230, Percent_Identity=30.4347826086957, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI32565798, Length=119, Percent_Identity=32.7731092436975, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI212646031, Length=244, Percent_Identity=26.2295081967213, Blast_Score=65, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI212646033, Length=244, Percent_Identity=26.2295081967213, Blast_Score=65, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI212646035, Length=244, Percent_Identity=26.2295081967213, Blast_Score=65, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6322079, Length=96, Percent_Identity=38.5416666666667, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI45553307, Length=224, Percent_Identity=34.375, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24644921, Length=224, Percent_Identity=34.375, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24644919, Length=224, Percent_Identity=34.375, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI281359521, Length=222, Percent_Identity=33.3333333333333, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI281359519, Length=222, Percent_Identity=33.3333333333333, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI28558752, Length=222, Percent_Identity=33.3333333333333, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI28558750, Length=222, Percent_Identity=33.3333333333333, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI28558756, Length=222, Percent_Identity=33.3333333333333, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI28558754, Length=222, Percent_Identity=33.3333333333333, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI161082089, Length=214, Percent_Identity=29.4392523364486, Blast_Score=76, Evalue=4e-14,
Organism=Drosophila melanogaster, GI161082085, Length=214, Percent_Identity=29.4392523364486, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI161082110, Length=207, Percent_Identity=28.9855072463768, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI161082099, Length=214, Percent_Identity=29.4392523364486, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI161082081, Length=207, Percent_Identity=28.9855072463768, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI161082106, Length=207, Percent_Identity=28.9855072463768, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI161082096, Length=215, Percent_Identity=30.2325581395349, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI161082092, Length=249, Percent_Identity=30.1204819277108, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI21356741, Length=222, Percent_Identity=32.8828828828829, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683
- InterPro:   IPR007685 [H]

Pfam domain/function: PF00023 Ank; PF04607 RelA_SpoT [H]

EC number: NA

Molecular weight: Translated: 40710; Mature: 40710

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILFRMMITILMAAQMDCATIQMLEDAQFLPTPVWSMARYADKTISPELSKNPNVWNPP
CHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
LWIYPGTRRYWMTGINKNFPFSVIDLTLSFLADTILLPITIPLTAYYYWRVPEAWESGLL
EEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHHCCEE
IGSIENNDLSGVRRCIETGADVNSTFIGPPPLYFAIKNENVEIVRLLLEKGADVNFQNNT
EEECCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCC
FYDQSLLYFAIEKENTEIVELLLKKGADANAKSCDLFRRCNYLFFKVIERYSNLSPKKDK
EECCCEEEEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
RPEIVRLLLEKGGADVNATLAEDGTSPLHYAVEKKHNIQIVKQLVEHGANVNGKDVYQQT
CHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHCC
PLYDVASKEIAQYLLQQGADPTVKNSTGETPLERAKYLMNLDRKNNYDALKFLEDTP
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHCCCCC
>Mature Secondary Structure
MKILFRMMITILMAAQMDCATIQMLEDAQFLPTPVWSMARYADKTISPELSKNPNVWNPP
CHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
LWIYPGTRRYWMTGINKNFPFSVIDLTLSFLADTILLPITIPLTAYYYWRVPEAWESGLL
EEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHHCCEE
IGSIENNDLSGVRRCIETGADVNSTFIGPPPLYFAIKNENVEIVRLLLEKGADVNFQNNT
EEECCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCC
FYDQSLLYFAIEKENTEIVELLLKKGADANAKSCDLFRRCNYLFFKVIERYSNLSPKKDK
EECCCEEEEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
RPEIVRLLLEKGGADVNATLAEDGTSPLHYAVEKKHNIQIVKQLVEHGANVNGKDVYQQT
CHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHCC
PLYDVASKEIAQYLLQQGADPTVKNSTGETPLERAKYLMNLDRKNNYDALKFLEDTP
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA