Click here to switch to the map view.

The map label for this gene is 45658818

Identifier: 45658818

GI number: 45658818

Start: 3635436

End: 3635813

Strand: Reverse

Name: 45658818

Synonym: LIC12991

Alternate gene names: NA

Gene position: 3635813-3635436 (Counterclockwise)

Preceding gene: 45658819

Following gene: 45658817

Centisome position: 85.0

GC content: 35.98

Gene sequence:

>378_bases
ATGGGCCAAGCTATATTCAAAACATGGATCGGATGTACATTGTTAGCCGTTCTTATGTTGACTTTGGGCTGTGGGCCAAT
TTGCGGATTCGATTCTAAAATAAAAGAAACGATCGAAACTCTTCAATCTTCTTGTCATCAAGAATCGAATTCGGATGAAG
CTCCAGGTTGCGATTGGGATTCCGGCTCGATTACTTTTTCGGAAATCGGTACAAACTTTTTTAAACTACTAAAATTTTTT
ATACCACCTCAAATTCATTCCTCAAACGTATACTTTTCGTTTTTTACTTTCAAGATGGATATCCGATTCATTTCTGATTT
TTTCAAAGCTGGCTTAAACGAAATTCAAACGTTAGACTCAGTTCGTCTTTTGATTTAA

Upstream 100 bases:

>100_bases
ATTTCTTTCGGAAAGTCGCGACGATTCTTCTATGTGTTTTGCGCAATAGGCGTGCCTATTTTACGTTGACAAGTTCAGAT
GAACATTAAGTTGATAAGAT

Downstream 100 bases:

>100_bases
TTTATAGTCCCACATATTTTAATCCTTTCTGTTTTGAAATCGATAGAACGTTCTTTCGATCTTAAAATTTGAAAGAGTTT
TGCTCTGATACAGAAATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MGQAIFKTWIGCTLLAVLMLTLGCGPICGFDSKIKETIETLQSSCHQESNSDEAPGCDWDSGSITFSEIGTNFFKLLKFF
IPPQIHSSNVYFSFFTFKMDIRFISDFFKAGLNEIQTLDSVRLLI

Sequences:

>Translated_125_residues
MGQAIFKTWIGCTLLAVLMLTLGCGPICGFDSKIKETIETLQSSCHQESNSDEAPGCDWDSGSITFSEIGTNFFKLLKFF
IPPQIHSSNVYFSFFTFKMDIRFISDFFKAGLNEIQTLDSVRLLI
>Mature_124_residues
GQAIFKTWIGCTLLAVLMLTLGCGPICGFDSKIKETIETLQSSCHQESNSDEAPGCDWDSGSITFSEIGTNFFKLLKFFI
PPQIHSSNVYFSFFTFKMDIRFISDFFKAGLNEIQTLDSVRLLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14039; Mature: 13908

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQAIFKTWIGCTLLAVLMLTLGCGPICGFDSKIKETIETLQSSCHQESNSDEAPGCDWD
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
SGSITFSEIGTNFFKLLKFFIPPQIHSSNVYFSFFTFKMDIRFISDFFKAGLNEIQTLDS
CCCEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
VRLLI
HHHCC
>Mature Secondary Structure 
GQAIFKTWIGCTLLAVLMLTLGCGPICGFDSKIKETIETLQSSCHQESNSDEAPGCDWD
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
SGSITFSEIGTNFFKLLKFFIPPQIHSSNVYFSFFTFKMDIRFISDFFKAGLNEIQTLDS
CCCEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
VRLLI
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA