Click here to switch to the map view.

The map label for this gene is 45658813

Identifier: 45658813

GI number: 45658813

Start: 3624980

End: 3626878

Strand: Reverse

Name: 45658813

Synonym: LIC12986

Alternate gene names: NA

Gene position: 3626878-3624980 (Counterclockwise)

Preceding gene: 45658814

Following gene: 45658812

Centisome position: 84.8

GC content: 40.44

Gene sequence:

>1899_bases
ATGGGTCGTTGGATAGTTTTATTATTAGTTTTGTTAATCTCGTTTGGAGTTGGTTACTCTTACGGTGTAAATCCAGATGT
TGTTCCTATTTCATCGAGTGATATTCCTGGTTCAATCATTCAAAGGCCTACCGATAAACCAAAAGATAAACCGATCAAAG
TCAATGTAAGTAGTGGTGGAACATTTTGTTACGGTCCTAATTTTAGCGGCGGTGAAAGTTACATTGTGATCGAACAGTGT
TGGCAAATGCACGTTATGAATGCAAGATACGACGTGTTTCAAAGAATTTCGTATAACATCAACGATACGTGGTTGTGTAT
CACTGTCCCAGAGAGTGTAGTTAAGGGAGAGACAAATTGGGACTATGTTCACCTCAGACCTTGTACAATCAATGATCCTC
TGCAAAGATGGATCGTAAAAGAAAATTCCTTTTGGACTGCGGATGAGCGTTATCGTTTAAAAGATACAAATTGGTATGCT
TATATTTCTAGAAATTCTGGCGATAGATACAATCATACATTAGATTCTTCGATGAGTGATTGGATCAATACAGTAGCCAC
TCCCGGTAACATCAGTATTTTGACTTCCATCGCTTGGGATTTAGGAAGTGATCGTTATTTTATTCGTTCAGGAGGTTCGG
ATAAAAATACGACACCTATTTACTACAATCCTGAAAGTGGACATCTTGCTCAATACAATCCAGTGAGTGGATTGCTCTCT
TGTATGTATTCTCGGGTAGGTAGTTATGATTGGAATTGGGTGACGTGGGCATTGTGTAGTGATGCACCTATCAGTAAGGA
TAATCCAGCTTATTGGAACGTATATCTTGCAACCGAAGAAGGTGGGATGATCATGGATTATCAGGGCAACGCACTGAGGG
TTACCAGGTATGGACCTAATTGGGGTGTTGCGTATGCGGCTAAACTTTCTTATTTGAAAAAGGATACAACCTATAACCCG
ACTTCTCTATTTATCGTTGATAGAAATTTATTGAATTGGGTTCGTTACACAGTTAGTAATCTTGGAAAGACAGATCAGTA
TTGTCCAGCTGGTAAGAAAGAAAATCATAATATAAGAATAAAAAGAACTTTACCACCGGATTTTCAACTAACCGAGGAAT
GGCTAAGGAGACTTTACGACATAGCGATTTCAACTTCATTTACAAGTGAGGGGCAGGTCCATGGTATATGCGGCACTTGT
CTACTTCAAACCTTCCAGATGTTGGCAGAACTCCAGGAATATCATTCTCATGGACCTATTCAGGGTGGAGGTTATTTTTT
CAATACTGCTCATGATAGAGATCCTTTTGACTCGTTTAGGCAACGTTATCCGGAATTGGACGCGATGTTAGTAAATATAC
CTATAGTGTATAGTCAGGATGGTAACGTGCCTAGGATGGGATTGGCATCTGCTCGAACTATGTTGCCTCAATATGACTGG
ACTCTCTCTCGTGAATTTACCACTCGATCAGAGATGTTATCTCATATTACATCACTTATAGCTTCTCCTCCCGGAAGTAT
GTGGTTATCGATGTTCAGGGTTCGTAGACCGGATGGAACTACGGGAGGTCATGCCGTTCCAATTCTGAGAACCTCTCAAG
GGTTAGTGGTAATTCCAACGAATTCTGCTTCGTTGTCATTTTTTACCTACAGACGATTTGCAACACCTACTACGGACCCG
GTCCAAGTGATGAATAACTTGGAAATGTCAAGTTGGACTTTGGAAATACTTGTAACTGCACAGTTAGAAGGGCTCTATTA
CAATACCTTTGACTTCACAATCTCTAACAGGAATTGCACTGGAGAAGGAAGAGATAGAAGAGGTTCAGGTGGATATCCAA
CCAGAACAACAGTAAACCAATGTTCAGGAAGAGGAGGAGGCAGATGTGTATTGCTGTAA

Upstream 100 bases:

>100_bases
GCTTATTGATAAACGGATTCAAACAAGATGAGAGAGACTACTGTATTTATAGATGGTTACATAACCAAATCTTAATTTTT
CAAAAAAGAGGAGAGTAAGA

Downstream 100 bases:

>100_bases
ATGTTCTAATTCAAAAACTAAATGGATGTTAAATATTGAAATCCTATTACAACTTGAAGACTGAATATCTATTTTAGTAA
ACTCATAAAATTGAATTATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 632; Mature: 631

Protein sequence:

>632_residues
MGRWIVLLLVLLISFGVGYSYGVNPDVVPISSSDIPGSIIQRPTDKPKDKPIKVNVSSGGTFCYGPNFSGGESYIVIEQC
WQMHVMNARYDVFQRISYNINDTWLCITVPESVVKGETNWDYVHLRPCTINDPLQRWIVKENSFWTADERYRLKDTNWYA
YISRNSGDRYNHTLDSSMSDWINTVATPGNISILTSIAWDLGSDRYFIRSGGSDKNTTPIYYNPESGHLAQYNPVSGLLS
CMYSRVGSYDWNWVTWALCSDAPISKDNPAYWNVYLATEEGGMIMDYQGNALRVTRYGPNWGVAYAAKLSYLKKDTTYNP
TSLFIVDRNLLNWVRYTVSNLGKTDQYCPAGKKENHNIRIKRTLPPDFQLTEEWLRRLYDIAISTSFTSEGQVHGICGTC
LLQTFQMLAELQEYHSHGPIQGGGYFFNTAHDRDPFDSFRQRYPELDAMLVNIPIVYSQDGNVPRMGLASARTMLPQYDW
TLSREFTTRSEMLSHITSLIASPPGSMWLSMFRVRRPDGTTGGHAVPILRTSQGLVVIPTNSASLSFFTYRRFATPTTDP
VQVMNNLEMSSWTLEILVTAQLEGLYYNTFDFTISNRNCTGEGRDRRGSGGYPTRTTVNQCSGRGGGRCVLL

Sequences:

>Translated_632_residues
MGRWIVLLLVLLISFGVGYSYGVNPDVVPISSSDIPGSIIQRPTDKPKDKPIKVNVSSGGTFCYGPNFSGGESYIVIEQC
WQMHVMNARYDVFQRISYNINDTWLCITVPESVVKGETNWDYVHLRPCTINDPLQRWIVKENSFWTADERYRLKDTNWYA
YISRNSGDRYNHTLDSSMSDWINTVATPGNISILTSIAWDLGSDRYFIRSGGSDKNTTPIYYNPESGHLAQYNPVSGLLS
CMYSRVGSYDWNWVTWALCSDAPISKDNPAYWNVYLATEEGGMIMDYQGNALRVTRYGPNWGVAYAAKLSYLKKDTTYNP
TSLFIVDRNLLNWVRYTVSNLGKTDQYCPAGKKENHNIRIKRTLPPDFQLTEEWLRRLYDIAISTSFTSEGQVHGICGTC
LLQTFQMLAELQEYHSHGPIQGGGYFFNTAHDRDPFDSFRQRYPELDAMLVNIPIVYSQDGNVPRMGLASARTMLPQYDW
TLSREFTTRSEMLSHITSLIASPPGSMWLSMFRVRRPDGTTGGHAVPILRTSQGLVVIPTNSASLSFFTYRRFATPTTDP
VQVMNNLEMSSWTLEILVTAQLEGLYYNTFDFTISNRNCTGEGRDRRGSGGYPTRTTVNQCSGRGGGRCVLL
>Mature_631_residues
GRWIVLLLVLLISFGVGYSYGVNPDVVPISSSDIPGSIIQRPTDKPKDKPIKVNVSSGGTFCYGPNFSGGESYIVIEQCW
QMHVMNARYDVFQRISYNINDTWLCITVPESVVKGETNWDYVHLRPCTINDPLQRWIVKENSFWTADERYRLKDTNWYAY
ISRNSGDRYNHTLDSSMSDWINTVATPGNISILTSIAWDLGSDRYFIRSGGSDKNTTPIYYNPESGHLAQYNPVSGLLSC
MYSRVGSYDWNWVTWALCSDAPISKDNPAYWNVYLATEEGGMIMDYQGNALRVTRYGPNWGVAYAAKLSYLKKDTTYNPT
SLFIVDRNLLNWVRYTVSNLGKTDQYCPAGKKENHNIRIKRTLPPDFQLTEEWLRRLYDIAISTSFTSEGQVHGICGTCL
LQTFQMLAELQEYHSHGPIQGGGYFFNTAHDRDPFDSFRQRYPELDAMLVNIPIVYSQDGNVPRMGLASARTMLPQYDWT
LSREFTTRSEMLSHITSLIASPPGSMWLSMFRVRRPDGTTGGHAVPILRTSQGLVVIPTNSASLSFFTYRRFATPTTDPV
QVMNNLEMSSWTLEILVTAQLEGLYYNTFDFTISNRNCTGEGRDRRGSGGYPTRTTVNQCSGRGGGRCVLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 71572; Mature: 71441

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRWIVLLLVLLISFGVGYSYGVNPDVVPISSSDIPGSIIQRPTDKPKDKPIKVNVSSGG
CCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCHHHHCCCCCCCCCCCEEEEECCCC
TFCYGPNFSGGESYIVIEQCWQMHVMNARYDVFQRISYNINDTWLCITVPESVVKGETNW
EEEECCCCCCCCCEEEHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEECCHHHHCCCCCC
DYVHLRPCTINDPLQRWIVKENSFWTADERYRLKDTNWYAYISRNSGDRYNHTLDSSMSD
CEEEEEECCCCCHHHHHEECCCCEECCCCCEEEECCCEEEEEECCCCCCCCCCHHHHHHH
WINTVATPGNISILTSIAWDLGSDRYFIRSGGSDKNTTPIYYNPESGHLAQYNPVSGLLS
HHHHHCCCCCEEEEEEEHHHCCCCEEEEECCCCCCCCCCEEECCCCCCEEEECCHHHHHH
CMYSRVGSYDWNWVTWALCSDAPISKDNPAYWNVYLATEEGGMIMDYQGNALRVTRYGPN
HHHHHHCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCCEEEEECCCEEEEEEECCC
WGVAYAAKLSYLKKDTTYNPTSLFIVDRNLLNWVRYTVSNLGKTDQYCPAGKKENHNIRI
CCHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE
KRTLPPDFQLTEEWLRRLYDIAISTSFTSEGQVHGICGTCLLQTFQMLAELQEYHSHGPI
EECCCCCHHHHHHHHHHHHHHHEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCC
QGGGYFFNTAHDRDPFDSFRQRYPELDAMLVNIPIVYSQDGNVPRMGLASARTMLPQYDW
CCCCEEEECCCCCCHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHCCCCCC
TLSREFTTRSEMLSHITSLIASPPGSMWLSMFRVRRPDGTTGGHAVPILRTSQGLVVIPT
EECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCCCCEEEEEEECCCCEEEEEC
NSASLSFFTYRRFATPTTDPVQVMNNLEMSSWTLEILVTAQLEGLYYNTFDFTISNRNCT
CCCEEEEEEEEEECCCCCCHHHHHHCCCCCCEEEEEEEEEEECCEEEEEEEEEEECCCCC
GEGRDRRGSGGYPTRTTVNQCSGRGGGRCVLL
CCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEC
>Mature Secondary Structure 
GRWIVLLLVLLISFGVGYSYGVNPDVVPISSSDIPGSIIQRPTDKPKDKPIKVNVSSGG
CHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCHHHHCCCCCCCCCCCEEEEECCCC
TFCYGPNFSGGESYIVIEQCWQMHVMNARYDVFQRISYNINDTWLCITVPESVVKGETNW
EEEECCCCCCCCCEEEHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEECCHHHHCCCCCC
DYVHLRPCTINDPLQRWIVKENSFWTADERYRLKDTNWYAYISRNSGDRYNHTLDSSMSD
CEEEEEECCCCCHHHHHEECCCCEECCCCCEEEECCCEEEEEECCCCCCCCCCHHHHHHH
WINTVATPGNISILTSIAWDLGSDRYFIRSGGSDKNTTPIYYNPESGHLAQYNPVSGLLS
HHHHHCCCCCEEEEEEEHHHCCCCEEEEECCCCCCCCCCEEECCCCCCEEEECCHHHHHH
CMYSRVGSYDWNWVTWALCSDAPISKDNPAYWNVYLATEEGGMIMDYQGNALRVTRYGPN
HHHHHHCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCCEEEEECCCEEEEEEECCC
WGVAYAAKLSYLKKDTTYNPTSLFIVDRNLLNWVRYTVSNLGKTDQYCPAGKKENHNIRI
CCHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE
KRTLPPDFQLTEEWLRRLYDIAISTSFTSEGQVHGICGTCLLQTFQMLAELQEYHSHGPI
EECCCCCHHHHHHHHHHHHHHHEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCC
QGGGYFFNTAHDRDPFDSFRQRYPELDAMLVNIPIVYSQDGNVPRMGLASARTMLPQYDW
CCCCEEEECCCCCCHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHCCCCCC
TLSREFTTRSEMLSHITSLIASPPGSMWLSMFRVRRPDGTTGGHAVPILRTSQGLVVIPT
EECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCCCCEEEEEEECCCCEEEEEC
NSASLSFFTYRRFATPTTDPVQVMNNLEMSSWTLEILVTAQLEGLYYNTFDFTISNRNCT
CCCEEEEEEEEEECCCCCCHHHHHHCCCCCCEEEEEEEEEEECCEEEEEEEEEEECCCCC
GEGRDRRGSGGYPTRTTVNQCSGRGGGRCVLL
CCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA