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The map label for this gene is csoR [H]

Identifier: 45658811

GI number: 45658811

Start: 3622708

End: 3623001

Strand: Reverse

Name: csoR [H]

Synonym: LIC12984

Alternate gene names: 45658811

Gene position: 3623001-3622708 (Counterclockwise)

Preceding gene: 45658812

Following gene: 45658810

Centisome position: 84.71

GC content: 32.31

Gene sequence:

>294_bases
ATGAAACATAAACCAAAACACAAACTTATATCGGATCCAAAGGAAAGTAAAAATCTGATTCTAAGATTAAAAAAAATAGA
AGGACAGATACGAGGAATTCAAGGGATGATTGAAAACGAAAAATATTGCGATGATGTACTTAATCAAATATCTTCCGTAA
AATCAGCATTAGACGGTGTATCTAGGGGATTGCTTAAGAGTCATATTCGAACTTGTGTCACAGAGAGGATCAGAGGAAAC
GATTCAAAAATTTTAGAAGAGTTTATGACAACTGTAGGTTATATTCTAAGGTAA

Upstream 100 bases:

>100_bases
CTAAAACTAAAAAAAATCACGAAGTATTTACACGAAGACGTATAAAAATAAATAACCAACAAATGAAATCAAAAGTCTAT
AGTATAGGGAGGTATAGTAT

Downstream 100 bases:

>100_bases
ACAAAGAAGAGAATCTAATGAAAGAAATCAGGCTAACTGTAGAAGGGATGACCTGCTTACATTGTCTAAAAACGATTGAG
TCTGCTTTAAAAGAAGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Copper-sensitive operon repressor [H]

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MKHKPKHKLISDPKESKNLILRLKKIEGQIRGIQGMIENEKYCDDVLNQISSVKSALDGVSRGLLKSHIRTCVTERIRGN
DSKILEEFMTTVGYILR

Sequences:

>Translated_97_residues
MKHKPKHKLISDPKESKNLILRLKKIEGQIRGIQGMIENEKYCDDVLNQISSVKSALDGVSRGLLKSHIRTCVTERIRGN
DSKILEEFMTTVGYILR
>Mature_97_residues
MKHKPKHKLISDPKESKNLILRLKKIEGQIRGIQGMIENEKYCDDVLNQISSVKSALDGVSRGLLKSHIRTCVTERIRGN
DSKILEEFMTTVGYILR

Specific function: Copper-sensitive repressor that has a key role in copper homeostasis. Negatively regulates expression of the copZA operon and of ycnJ. In the absence of copper ions, binds with high affinity to the copZA promoter and represses the transcription. In the pr

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CsoR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 11092; Mature: 11092

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHKPKHKLISDPKESKNLILRLKKIEGQIRGIQGMIENEKYCDDVLNQISSVKSALDGV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
SRGLLKSHIRTCVTERIRGNDSKILEEFMTTVGYILR
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKHKPKHKLISDPKESKNLILRLKKIEGQIRGIQGMIENEKYCDDVLNQISSVKSALDGV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
SRGLLKSHIRTCVTERIRGNDSKILEEFMTTVGYILR
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]