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The map label for this gene is 45658664

Identifier: 45658664

GI number: 45658664

Start: 3438843

End: 3439886

Strand: Reverse

Name: 45658664

Synonym: LIC12834

Alternate gene names: NA

Gene position: 3439886-3438843 (Counterclockwise)

Preceding gene: 45658665

Following gene: 45658657

Centisome position: 80.42

GC content: 39.08

Gene sequence:

>1044_bases
ATGAAACATATTTTCCTTTTTATTATTTTATTATTTCTTTTTGAAACCTGTTTTCCAATCGATCCAGAGAGAATTCGTTC
TTCTCATTTTCAGGATGGAAAGTATCACAATATTGAAGAAGATGTAAGACTGAATAAAAATTTTTTTTCGGTCTTACGTT
GGAAAATTTTAGGACCTAAGGATCCGCCTACAGTAGAGGGAGATCTGGAAAAAATTCCGGATGTAATCCCTATAAAAAAA
GAGGATTTACTTGCTCCCGAGGGTAAAGTGAGAATTGTCTGGCTTGGACATGCAACGGTATGGATCGCTTCTCATTTTCA
CGGTAAAAGAATGCACATTCTTACAGATCCGATATTTACTGGAGTTCCTCCTTTTGTTAAGCGACTTACTAAACTTCCGA
TCGAACCAGAAAATCTTCCCGGAGTGGACATTGTAGTGATTAGCCACGCGCACAGAGATCATTTGGATATAGATTCGATT
CAAAAGATACAAAAGTTATTTCCGGAAGTTACAGTTCATCTTCCTTCTGGAATGGGTGAATTTGCAAGGGACGAAGGACT
TGAAAATGCGGTAATACAAGAGTGGTGGACGATTACAGAATATGCGGGAACCAAAATTCACTTTCTTCCCGCAAAACATT
GGAGCAGAATGGGACTTACCGATATGAATCAATATCATTGGGGAAGTTACGCATTCGAATTTGAGAATATTAGAATATAC
TTTGGTGGTGATACTGGATTTTCAAAACACTTTTCGGAAATTGGGAAACGTTTTGCCCAGGGATTTTCAGCGACCATACT
TCCCATAGGAGCGTTTAAACCTAGATGGTTTATGGAACCTGCTCATATAGGACCCAAGGAAGCATTAGAGGCAAGTTCTA
TTCTTCATTCTTCTTTGATCCTTCCGGTTCATTGGGGGACATTCGCGCTTGGAGACGACCTTCCTTCGGAGGCTCCACTT
TATCTTAAAAAATTACATTCTGAGAAAAAAGATAAGTTACCGGCTCTACGAGTTTGGACGATGGGTGAAATTGTAGATTT
GTGA

Upstream 100 bases:

>100_bases
CGCGATTCGATACAAAGCTGGATTCACCTAAAAACAATTACACTTTGATTATTCAAAATAACAAATCGATATAAATTGAA
AGTCATTCTGGATTTACTTT

Downstream 100 bases:

>100_bases
ACGATTCCGGTTTTACTACTCGGCGTATGAAAAATAATATTAAAAACAAACGATTAATTTTATAAAAGATGTCAGAAATT
GTGTCTAACTCAGGATTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MKHIFLFIILLFLFETCFPIDPERIRSSHFQDGKYHNIEEDVRLNKNFFSVLRWKILGPKDPPTVEGDLEKIPDVIPIKK
EDLLAPEGKVRIVWLGHATVWIASHFHGKRMHILTDPIFTGVPPFVKRLTKLPIEPENLPGVDIVVISHAHRDHLDIDSI
QKIQKLFPEVTVHLPSGMGEFARDEGLENAVIQEWWTITEYAGTKIHFLPAKHWSRMGLTDMNQYHWGSYAFEFENIRIY
FGGDTGFSKHFSEIGKRFAQGFSATILPIGAFKPRWFMEPAHIGPKEALEASSILHSSLILPVHWGTFALGDDLPSEAPL
YLKKLHSEKKDKLPALRVWTMGEIVDL

Sequences:

>Translated_347_residues
MKHIFLFIILLFLFETCFPIDPERIRSSHFQDGKYHNIEEDVRLNKNFFSVLRWKILGPKDPPTVEGDLEKIPDVIPIKK
EDLLAPEGKVRIVWLGHATVWIASHFHGKRMHILTDPIFTGVPPFVKRLTKLPIEPENLPGVDIVVISHAHRDHLDIDSI
QKIQKLFPEVTVHLPSGMGEFARDEGLENAVIQEWWTITEYAGTKIHFLPAKHWSRMGLTDMNQYHWGSYAFEFENIRIY
FGGDTGFSKHFSEIGKRFAQGFSATILPIGAFKPRWFMEPAHIGPKEALEASSILHSSLILPVHWGTFALGDDLPSEAPL
YLKKLHSEKKDKLPALRVWTMGEIVDL
>Mature_347_residues
MKHIFLFIILLFLFETCFPIDPERIRSSHFQDGKYHNIEEDVRLNKNFFSVLRWKILGPKDPPTVEGDLEKIPDVIPIKK
EDLLAPEGKVRIVWLGHATVWIASHFHGKRMHILTDPIFTGVPPFVKRLTKLPIEPENLPGVDIVVISHAHRDHLDIDSI
QKIQKLFPEVTVHLPSGMGEFARDEGLENAVIQEWWTITEYAGTKIHFLPAKHWSRMGLTDMNQYHWGSYAFEFENIRIY
FGGDTGFSKHFSEIGKRFAQGFSATILPIGAFKPRWFMEPAHIGPKEALEASSILHSSLILPVHWGTFALGDDLPSEAPL
YLKKLHSEKKDKLPALRVWTMGEIVDL

Specific function: Unknown

COG id: COG2220

COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To K.pneumoniae romA [H]

Homologues:

Organism=Homo sapiens, GI170932483, Length=327, Percent_Identity=32.4159021406728, Blast_Score=165, Evalue=6e-41,
Organism=Homo sapiens, GI170932481, Length=327, Percent_Identity=32.4159021406728, Blast_Score=165, Evalue=6e-41,
Organism=Caenorhabditis elegans, GI17543104, Length=280, Percent_Identity=33.5714285714286, Blast_Score=145, Evalue=4e-35,
Organism=Caenorhabditis elegans, GI25148824, Length=261, Percent_Identity=34.0996168582375, Blast_Score=142, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI17543102, Length=261, Percent_Identity=34.0996168582375, Blast_Score=142, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI17543100, Length=261, Percent_Identity=34.0996168582375, Blast_Score=142, Evalue=2e-34,
Organism=Saccharomyces cerevisiae, GI6325154, Length=250, Percent_Identity=32.4, Blast_Score=129, Evalue=9e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39806; Mature: 39806

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHIFLFIILLFLFETCFPIDPERIRSSHFQDGKYHNIEEDVRLNKNFFSVLRWKILGPK
CHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCHHHHHHCHHHHHHHHHHCCCCC
DPPTVEGDLEKIPDVIPIKKEDLLAPEGKVRIVWLGHATVWIASHFHGKRMHILTDPIFT
CCCCCCCHHHHCCCCCCCCHHHCCCCCCCEEEEEECCEEEEEEECCCCCEEEEEECCHHC
GVPPFVKRLTKLPIEPENLPGVDIVVISHAHRDHLDIDSIQKIQKLFPEVTVHLPSGMGE
CCCHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEECCCCCCH
FARDEGLENAVIQEWWTITEYAGTKIHFLPAKHWSRMGLTDMNQYHWGSYAFEFENIRIY
HHHHCCCHHHHHHHHHHHHHHCCCEEEEEECHHHHHCCCCCCCCCCCCCEEEEECCEEEE
FGGDTGFSKHFSEIGKRFAQGFSATILPIGAFKPRWFMEPAHIGPKEALEASSILHSSLI
ECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEE
LPVHWGTFALGDDLPSEAPLYLKKLHSEKKDKLPALRVWTMGEIVDL
EEEECCCEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEECHHHHCC
>Mature Secondary Structure
MKHIFLFIILLFLFETCFPIDPERIRSSHFQDGKYHNIEEDVRLNKNFFSVLRWKILGPK
CHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCHHHHHHCHHHHHHHHHHCCCCC
DPPTVEGDLEKIPDVIPIKKEDLLAPEGKVRIVWLGHATVWIASHFHGKRMHILTDPIFT
CCCCCCCHHHHCCCCCCCCHHHCCCCCCCEEEEEECCEEEEEEECCCCCEEEEEECCHHC
GVPPFVKRLTKLPIEPENLPGVDIVVISHAHRDHLDIDSIQKIQKLFPEVTVHLPSGMGE
CCCHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEECCCCCCH
FARDEGLENAVIQEWWTITEYAGTKIHFLPAKHWSRMGLTDMNQYHWGSYAFEFENIRIY
HHHHCCCHHHHHHHHHHHHHHCCCEEEEEECHHHHHCCCCCCCCCCCCCEEEEECCEEEE
FGGDTGFSKHFSEIGKRFAQGFSATILPIGAFKPRWFMEPAHIGPKEALEASSILHSSLI
ECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEE
LPVHWGTFALGDDLPSEAPLYLKKLHSEKKDKLPALRVWTMGEIVDL
EEEECCCEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEECHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]