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The map label for this gene is dshA

Identifier: 45658590

GI number: 45658590

Start: 3353542

End: 3354594

Strand: Reverse

Name: dshA

Synonym: LIC12756

Alternate gene names: NA

Gene position: 3354594-3353542 (Counterclockwise)

Preceding gene: 45658591

Following gene: 45658588

Centisome position: 78.43

GC content: 31.24

Gene sequence:

>1053_bases
ATGGAACCTAATTCAGATTCAAATCGAAGGTCAAATATGGAACGAGCAATTTCAAACGAAATGACACGGCTAGAACTCAG
TGAATTTTTATCGGATCCAAGATCTAGAAAAGAATTTTTTGAGTTGATGAAATTAAAGAATAAAATCGGACATTTAGAAA
TGAATCTAAAGTTAGGATCCGATGAAAACAAAAGTAGAACTTTCTATATTAGAAATTCATTATTAGCTGCTGCTTGTGTT
CTTTTGCTTTCAGCTCTAGCTTTTTATTTCAGATTTTTTTCTTCGGAACAAAACGAATTTGAAATTACAAAATCAGTAAC
TACTGGTCAGTGTAATGTTTCTATTAATAAAGAAAACATTATTCTGAAATCGGGTAAGGATTCTTATTGTGATTATACAA
TTTCGGGAGAATTAGGACTAACGTTGAGGATTTTACCAGAATCCATTTTTTCAGCTTCTAAAAAAGGAGATGAAGTAAAT
CTAAGTTTAAGTTCCGGAAAAGTTTTATTCACTACGAACAAAAAAAAAATATCTTTAAAAATTCGGTCGAAAGTAGATAC
TTTATCTTCCGAACTTTTGGGAACAACTCTCGTTTTGATCGCAGATCAACATTCTAAAAAATATCAAATTATGGTTTTGG
AAGGAGCTATACGAGTCGATTCTACAAAATCAAAAATGGATATTTTACCTGGTTATTCGGTTTTGAAGGATGGATCTTCT
GAAAGTTCTACTCAATCCTCTGGGCAAGAAGTCGAGGTTATGAAAATTGAGCCAAAAGAATTTACAAAATACCAAGCGCT
TTCGGAGAATTCTAAAAAGGTCTTAAATGAAAACTTTACTCATCACAATCGGGAAACGGATTTTTTAATCAAATCCGAAA
TAGAAGAGAATTCGTATCCTATATATCGTATCACTCTTAAAAACAAACAAGTTGTTTCTGGAACGATCGAAGAGACTGAA
AAATTTTATCTACTTAAAGATAAAGATGGGAATATCAAAGAAATTGAAAAAGAGGATATAATCGAATTAGAACTTGTTCA
ACCAAAGAACTAA

Upstream 100 bases:

>100_bases
GTGAGAACGGTAAATAGAAAAACATTCGCCACACTCACCGTTTTACGTAAGAAATTGGAAGCATTGAATTTCGACTTTGA
GAGTATATAGGAGATAAAAT

Downstream 100 bases:

>100_bases
CACGTGTTAGATTTTTTTTCAATACAGTATTTCCATTTAATATTCTTCTAATACAAGGTTTCACAAACTTTTACCTTGTC
AATTTAGCCCTTCTTTAAAC

Product: DshA

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MEPNSDSNRRSNMERAISNEMTRLELSEFLSDPRSRKEFFELMKLKNKIGHLEMNLKLGSDENKSRTFYIRNSLLAAACV
LLLSALAFYFRFFSSEQNEFEITKSVTTGQCNVSINKENIILKSGKDSYCDYTISGELGLTLRILPESIFSASKKGDEVN
LSLSSGKVLFTTNKKKISLKIRSKVDTLSSELLGTTLVLIADQHSKKYQIMVLEGAIRVDSTKSKMDILPGYSVLKDGSS
ESSTQSSGQEVEVMKIEPKEFTKYQALSENSKKVLNENFTHHNRETDFLIKSEIEENSYPIYRITLKNKQVVSGTIEETE
KFYLLKDKDGNIKEIEKEDIIELELVQPKN

Sequences:

>Translated_350_residues
MEPNSDSNRRSNMERAISNEMTRLELSEFLSDPRSRKEFFELMKLKNKIGHLEMNLKLGSDENKSRTFYIRNSLLAAACV
LLLSALAFYFRFFSSEQNEFEITKSVTTGQCNVSINKENIILKSGKDSYCDYTISGELGLTLRILPESIFSASKKGDEVN
LSLSSGKVLFTTNKKKISLKIRSKVDTLSSELLGTTLVLIADQHSKKYQIMVLEGAIRVDSTKSKMDILPGYSVLKDGSS
ESSTQSSGQEVEVMKIEPKEFTKYQALSENSKKVLNENFTHHNRETDFLIKSEIEENSYPIYRITLKNKQVVSGTIEETE
KFYLLKDKDGNIKEIEKEDIIELELVQPKN
>Mature_350_residues
MEPNSDSNRRSNMERAISNEMTRLELSEFLSDPRSRKEFFELMKLKNKIGHLEMNLKLGSDENKSRTFYIRNSLLAAACV
LLLSALAFYFRFFSSEQNEFEITKSVTTGQCNVSINKENIILKSGKDSYCDYTISGELGLTLRILPESIFSASKKGDEVN
LSLSSGKVLFTTNKKKISLKIRSKVDTLSSELLGTTLVLIADQHSKKYQIMVLEGAIRVDSTKSKMDILPGYSVLKDGSS
ESSTQSSGQEVEVMKIEPKEFTKYQALSENSKKVLNENFTHHNRETDFLIKSEIEENSYPIYRITLKNKQVVSGTIEETE
KFYLLKDKDGNIKEIEKEDIIELELVQPKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39816; Mature: 39816

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPNSDSNRRSNMERAISNEMTRLELSEFLSDPRSRKEFFELMKLKNKIGHLEMNLKLGS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEEEEECC
DENKSRTFYIRNSLLAAACVLLLSALAFYFRFFSSEQNEFEITKSVTTGQCNVSINKENI
CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECEECCEEEEEECCCEE
ILKSGKDSYCDYTISGELGLTLRILPESIFSASKKGDEVNLSLSSGKVLFTTNKKKISLK
EEECCCCCCCCEEECCCCCEEEEECCHHHHHHCCCCCEEEEEECCCEEEEEECCEEEEEE
IRSKVDTLSSELLGTTLVLIADQHSKKYQIMVLEGAIRVDSTKSKMDILPGYSVLKDGSS
EECHHHHHHHHHHCEEEEEEECCCCCEEEEEEEECEEEECCCCCCEECCCCHHHHCCCCC
ESSTQSSGQEVEVMKIEPKEFTKYQALSENSKKVLNENFTHHNRETDFLIKSEIEENSYP
CCCCCCCCCEEEEEEECCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCC
IYRITLKNKQVVSGTIEETEKFYLLKDKDGNIKEIEKEDIIELELVQPKN
EEEEEECCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCC
>Mature Secondary Structure
MEPNSDSNRRSNMERAISNEMTRLELSEFLSDPRSRKEFFELMKLKNKIGHLEMNLKLGS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEEEEECC
DENKSRTFYIRNSLLAAACVLLLSALAFYFRFFSSEQNEFEITKSVTTGQCNVSINKENI
CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECEECCEEEEEECCCEE
ILKSGKDSYCDYTISGELGLTLRILPESIFSASKKGDEVNLSLSSGKVLFTTNKKKISLK
EEECCCCCCCCEEECCCCCEEEEECCHHHHHHCCCCCEEEEEECCCEEEEEECCEEEEEE
IRSKVDTLSSELLGTTLVLIADQHSKKYQIMVLEGAIRVDSTKSKMDILPGYSVLKDGSS
EECHHHHHHHHHHCEEEEEEECCCCCEEEEEEEECEEEECCCCCCEECCCCHHHHCCCCC
ESSTQSSGQEVEVMKIEPKEFTKYQALSENSKKVLNENFTHHNRETDFLIKSEIEENSYP
CCCCCCCCCEEEEEEECCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCC
IYRITLKNKQVVSGTIEETEKFYLLKDKDGNIKEIEKEDIIELELVQPKN
EEEEEECCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA