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The map label for this gene is 45658560

Identifier: 45658560

GI number: 45658560

Start: 3318748

End: 3319953

Strand: Reverse

Name: 45658560

Synonym: LIC12726

Alternate gene names: NA

Gene position: 3319953-3318748 (Counterclockwise)

Preceding gene: 45658566

Following gene: 45658557

Centisome position: 77.62

GC content: 32.92

Gene sequence:

>1206_bases
TTGATTTTTTTTAACTTTTTAATCTCTATGTATTATATTATCCTATTTATTATTTGTTTTGCTTGGACTTCATCTGCGTT
TCCCGATTTTGATTTTCCTTTTCCAATAAAAAATACTAAAAAACATTCAATTGAGACGATTCTTTCTGAATCTCGCAAAC
AAGAAGTCGGATCTTCTGAAAATTTAAAAAACAATGAAAATCCTAAATCTTTTTTAGGAACACAAGTTGAGTCCGCTAAG
ACCGAATCGAAAATAGAATCTTTCAAATTTAAATCACCTAAAAAAAACAAAATCTTCAAAATAGAAGTCGTGAAAGCCCA
GAATGAGGAAAATTTTTTAAAAAATTCCGACTTAGAAACTGTTTCTAATGTCAAAGTTCCGGAATTTTCCAGGGGGATTT
ATATTTCGCAGAAAACCTTAAAGAAAGAGAGAAAATTTGATGATCTTAGAAAAAAAGGGAAACAGCATGGGATTAATTTT
CTCGTAATCGATATTCAACCTTCAGTTCCGTCTAAGGAAATTGTAGAAACTTTGATAACAGAAGGATTTTATCCTGTTGC
TAGAATTGTGAATTTTGACGGGGGACTTCCGACAGAAAAACCATCTATCCAAAGAATCAATTCAATACATAAATCGATTC
AAGCTGCTTGTAAATCCGGTTTTCCAGAAATTCAATTGGATTACATTCGTTATGCAGATAATCTTAACTTAAAACTAACT
TACGAAATGCGATATAAAAATATCGCTGAAATTATTAAGGGTATCAGAAAGGAGACTCTTAGGTGTAATAATCTTCCTTA
TATTGGGGCAGATATTTTTGGTCGGATCCCATTTAACAAAAACGATATGATCGGACAGAAAGTAGAAATCTTTGCTCAAC
TTGTCGATGTACTTTATCCAATGCTTTACCCATCTCATTTTTACGGTATGTCCGATAAAATCAAAAATCCGTATCAGACT
GTGTATGACGGAACTCTTTTTACGATTAAGAGATCTCTAAAAACGACAAGAGTTATTCCTTACATTCAAGGTTTTAATAT
GTCTGTAGGGAAGTCGGGACTCACACTTTCAAATTATATCAAAGCTCAAATAAAGGCCTCTTATGATAGCGGAGGGCATG
GATTTGTAGTTTGGAATGCCTGGAATGATTACGAACCTACTTTTCAGGCCTTGAAAGACTACGAGAAAGAGTTGAAAAAG
GACTAA

Upstream 100 bases:

>100_bases
TTAATAAAGGTTAGAGTTTTTATTAGACACATTATGTCCGATAAAAGTATTATTCTAAGATCAAATATAGGATTCTTGTG
ATAGGTTCTAAAAAGATTTT

Downstream 100 bases:

>100_bases
TTATAATTTTTTCAAGTGTGAGGTTTCTATATTTTTACGATTTTACTGACTCTTACGTAATAAATTAACATGAGTTTGGC
TAACCAATAAGCAATGCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MIFFNFLISMYYIILFIICFAWTSSAFPDFDFPFPIKNTKKHSIETILSESRKQEVGSSENLKNNENPKSFLGTQVESAK
TESKIESFKFKSPKKNKIFKIEVVKAQNEENFLKNSDLETVSNVKVPEFSRGIYISQKTLKKERKFDDLRKKGKQHGINF
LVIDIQPSVPSKEIVETLITEGFYPVARIVNFDGGLPTEKPSIQRINSIHKSIQAACKSGFPEIQLDYIRYADNLNLKLT
YEMRYKNIAEIIKGIRKETLRCNNLPYIGADIFGRIPFNKNDMIGQKVEIFAQLVDVLYPMLYPSHFYGMSDKIKNPYQT
VYDGTLFTIKRSLKTTRVIPYIQGFNMSVGKSGLTLSNYIKAQIKASYDSGGHGFVVWNAWNDYEPTFQALKDYEKELKK
D

Sequences:

>Translated_401_residues
MIFFNFLISMYYIILFIICFAWTSSAFPDFDFPFPIKNTKKHSIETILSESRKQEVGSSENLKNNENPKSFLGTQVESAK
TESKIESFKFKSPKKNKIFKIEVVKAQNEENFLKNSDLETVSNVKVPEFSRGIYISQKTLKKERKFDDLRKKGKQHGINF
LVIDIQPSVPSKEIVETLITEGFYPVARIVNFDGGLPTEKPSIQRINSIHKSIQAACKSGFPEIQLDYIRYADNLNLKLT
YEMRYKNIAEIIKGIRKETLRCNNLPYIGADIFGRIPFNKNDMIGQKVEIFAQLVDVLYPMLYPSHFYGMSDKIKNPYQT
VYDGTLFTIKRSLKTTRVIPYIQGFNMSVGKSGLTLSNYIKAQIKASYDSGGHGFVVWNAWNDYEPTFQALKDYEKELKK
D
>Mature_401_residues
MIFFNFLISMYYIILFIICFAWTSSAFPDFDFPFPIKNTKKHSIETILSESRKQEVGSSENLKNNENPKSFLGTQVESAK
TESKIESFKFKSPKKNKIFKIEVVKAQNEENFLKNSDLETVSNVKVPEFSRGIYISQKTLKKERKFDDLRKKGKQHGINF
LVIDIQPSVPSKEIVETLITEGFYPVARIVNFDGGLPTEKPSIQRINSIHKSIQAACKSGFPEIQLDYIRYADNLNLKLT
YEMRYKNIAEIIKGIRKETLRCNNLPYIGADIFGRIPFNKNDMIGQKVEIFAQLVDVLYPMLYPSHFYGMSDKIKNPYQT
VYDGTLFTIKRSLKTTRVIPYIQGFNMSVGKSGLTLSNYIKAQIKASYDSGGHGFVVWNAWNDYEPTFQALKDYEKELKK
D

Specific function: Unknown

COG id: COG1306

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46235; Mature: 46235

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFFNFLISMYYIILFIICFAWTSSAFPDFDFPFPIKNTKKHSIETILSESRKQEVGSSE
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
NLKNNENPKSFLGTQVESAKTESKIESFKFKSPKKNKIFKIEVVKAQNEENFLKNSDLET
CCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCHHHHCCCCCHH
VSNVKVPEFSRGIYISQKTLKKERKFDDLRKKGKQHGINFLVIDIQPSVPSKEIVETLIT
HHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHH
EGFYPVARIVNFDGGLPTEKPSIQRINSIHKSIQAACKSGFPEIQLDYIRYADNLNLKLT
CCCHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEE
YEMRYKNIAEIIKGIRKETLRCNNLPYIGADIFGRIPFNKNDMIGQKVEIFAQLVDVLYP
EEEHHHHHHHHHHHHHHHHHHCCCCCEECHHHEEECCCCCCCCCHHHHHHHHHHHHHHHH
MLYPSHFYGMSDKIKNPYQTVYDGTLFTIKRSLKTTRVIPYIQGFNMSVGKSGLTLSNYI
HHCCHHHCCCHHHHCCCHHHHHCCHHEEHHHHHHHHHHCHHHCCCCCCCCCCCCCHHHHH
KAQIKASYDSGGHGFVVWNAWNDYEPTFQALKDYEKELKKD
HHHEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIFFNFLISMYYIILFIICFAWTSSAFPDFDFPFPIKNTKKHSIETILSESRKQEVGSSE
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
NLKNNENPKSFLGTQVESAKTESKIESFKFKSPKKNKIFKIEVVKAQNEENFLKNSDLET
CCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCHHHHCCCCCHH
VSNVKVPEFSRGIYISQKTLKKERKFDDLRKKGKQHGINFLVIDIQPSVPSKEIVETLIT
HHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHH
EGFYPVARIVNFDGGLPTEKPSIQRINSIHKSIQAACKSGFPEIQLDYIRYADNLNLKLT
CCCHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEE
YEMRYKNIAEIIKGIRKETLRCNNLPYIGADIFGRIPFNKNDMIGQKVEIFAQLVDVLYP
EEEHHHHHHHHHHHHHHHHHHCCCCCEECHHHEEECCCCCCCCCHHHHHHHHHHHHHHHH
MLYPSHFYGMSDKIKNPYQTVYDGTLFTIKRSLKTTRVIPYIQGFNMSVGKSGLTLSNYI
HHCCHHHCCCHHHHCCCHHHHHCCHHEEHHHHHHHHHHCHHHCCCCCCCCCCCCCHHHHH
KAQIKASYDSGGHGFVVWNAWNDYEPTFQALKDYEKELKKD
HHHEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA