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The map label for this gene is 45658548

Identifier: 45658548

GI number: 45658548

Start: 3299221

End: 3299619

Strand: Direct

Name: 45658548

Synonym: LIC12713

Alternate gene names: NA

Gene position: 3299221-3299619 (Clockwise)

Preceding gene: 45658547

Following gene: 45658549

Centisome position: 77.14

GC content: 30.83

Gene sequence:

>399_bases
ATGAAGTATTTGCTTGATACTCATGTAATTCTTTGGATAATCGGTTCATCTAACTTATTAAGTAAAAAAGCTAAAGCAAC
TATCGAAAATTCGGAAAATAAAATCTACGTTAGCTCAGTTTCTCTTTGGGAGATTTCACTGAAATTTAGATTAGGAAAAC
TTAGTCTTTCCGGAATGAAACCATCGCAAATCCCAGAAATTCTCTCTAAATCCAATATTGAGACTATAAATCTTGAATCA
GCCGATGCAAGCACATACGATCAATTAAAGGTTATACATCATAGAGATCCATTCGATAGGATGCTAATTTGGCAATGTAT
TTTAAGAAAGTTTACATTGATAAGTAAAGATTCAAAAATGAAAAAATATAGATCACATGGATTAAAAACACTTTGGTGA

Upstream 100 bases:

>100_bases
AAAAAGGAAGGGAAAAGAAAAATAGGATTATTGGATGGAAAGGTAAAAATTTCTTTCTCTAAAGGTTTTAAAATTTCCGA
AGAAGAGTTTTTAAGTTAAC

Downstream 100 bases:

>100_bases
TGCTTGCACACTTCGGCTTCTCGCGGCGTTTCGAGACGCAACGTCGAGAGTCTCTTTCGTTATGCGAAGATCGTATATTT
TAATGTCATATATAATTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: PilT Domain-Containing Protein; PilT Protein Domain-Containing Protein; PilT Protein-Like Protein; PilT Protein-Like; Pilt Protein Domain Protein; PilT Protein N-Terminal

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MKYLLDTHVILWIIGSSNLLSKKAKATIENSENKIYVSSVSLWEISLKFRLGKLSLSGMKPSQIPEILSKSNIETINLES
ADASTYDQLKVIHHRDPFDRMLIWQCILRKFTLISKDSKMKKYRSHGLKTLW

Sequences:

>Translated_132_residues
MKYLLDTHVILWIIGSSNLLSKKAKATIENSENKIYVSSVSLWEISLKFRLGKLSLSGMKPSQIPEILSKSNIETINLES
ADASTYDQLKVIHHRDPFDRMLIWQCILRKFTLISKDSKMKKYRSHGLKTLW
>Mature_132_residues
MKYLLDTHVILWIIGSSNLLSKKAKATIENSENKIYVSSVSLWEISLKFRLGKLSLSGMKPSQIPEILSKSNIETINLES
ADASTYDQLKVIHHRDPFDRMLIWQCILRKFTLISKDSKMKKYRSHGLKTLW

Specific function: Unknown

COG id: COG3744

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15281; Mature: 15281

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYLLDTHVILWIIGSSNLLSKKAKATIENSENKIYVSSVSLWEISLKFRLGKLSLSGMK
CCEEECCEEEEEEECCCCHHHHHHHHEEECCCCEEEEEEEEEEEEEEEEEEEEEEECCCC
PSQIPEILSKSNIETINLESADASTYDQLKVIHHRDPFDRMLIWQCILRKFTLISKDSKM
HHHHHHHHHCCCCEEEEECCCCCCCHHHEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHH
KKYRSHGLKTLW
HHHHHCCCCCCC
>Mature Secondary Structure
MKYLLDTHVILWIIGSSNLLSKKAKATIENSENKIYVSSVSLWEISLKFRLGKLSLSGMK
CCEEECCEEEEEEECCCCHHHHHHHHEEECCCCEEEEEEEEEEEEEEEEEEEEEEECCCC
PSQIPEILSKSNIETINLESADASTYDQLKVIHHRDPFDRMLIWQCILRKFTLISKDSKM
HHHHHHHHHCCCCEEEEECCCCCCCHHHEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHH
KKYRSHGLKTLW
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA