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The map label for this gene is 45658448

Identifier: 45658448

GI number: 45658448

Start: 3160149

End: 3161969

Strand: Reverse

Name: 45658448

Synonym: LIC12611

Alternate gene names: NA

Gene position: 3161969-3160149 (Counterclockwise)

Preceding gene: 45658449

Following gene: 45658447

Centisome position: 73.93

GC content: 36.46

Gene sequence:

>1821_bases
TTGGATGATAAAAATATGGCAGAACGAGAAGTAAATATTATTATTAAAATAGATGTGGATTCGAAAGACGCTTTTTCTGA
AATTGAAAAGGATCTGAAAAAGCTAAAATCACAGATCGTAGACTTTTCAGATGCTACAAGTCTTACTTCTCAAAGAGGGA
TTAAGTCTTGGAAGGATTTGACAGATTCAGTTCGAAATTTTGTAAAAGGAGAATCTGGCTTATCCATTTTTGCGAGTCGT
TTAAAAACGACTGAATCTAATCTTACCAGTTTGTATTCTAAGTTAAAAGGAAATGTAAAGTTAGAAAATGAATTTTTTGG
ACTTGCAAGGTCTGCGGGTTTTAGCGAAAGGCAAATTGCAAAACTAGATTTTCAACTCAATGCCAGCGCTAGGACTACGA
CCTTGCTTTCTTCCGTGTTCAAAGGTTTTGCCCAGATAGGTTCTTACGCTTTTAATTCTATCATTGTCCCTTCTTTGAAA
GTAGGAATTGCATTAGAAAAACAGATTGGAGTTTTGAAAAATCTTTCTGGAAACGAATATCCAAAATTACAAGACGCGAT
CAATAATACGATACAAATTTCTAAAGGCCTAACCACACAAAAAGAACTTACCGAAGCCGCAAACGAAGCGATCAAAACTG
GAGCTTCGGTTGAATTTATTTCTAAAAATCTTTCCGGGCTTCAAAAAGTCTCCAGACTTACGAATCAAGATTTAATATCT
TCTATGAAAGGGGCTTATAAAGCAATTGAAGACGGTTCCGAAGAATTTTTAAAAAGTAACGGGGCTTTGTTTTCTAGTTA
TTCTGCCGAGTTTAAACAGATAAATGAATCCGGTATGTCTGCGATTGATAAACGGTTGGCAAGGGAAAAATTAATCTCTG
CGGCTTTAAATGAAAATAGTATATTACAAAATAATTATGGATCCCACGTTAAAAACGCTTCCGTAATTTTAGAAAGGTTT
GATAAAACTATAGAAAGATTAAAGGAAAGTTTTGGACTTCTACTCGCAAAAGCCCTAACTCCTTCTTTGAATGTGATCGG
AGACTTGATCGATTACTTTACGATTGGCGGGAAAAGTTCGGAATATATGGAAGACGTATTGGTTATCTTTGGAAGTATTT
TGGTAGGTGTTCTGGGTGCAATTGCGGCTCAGATGATCGTTACGTCCGGAATTACTTTTGGAGCTATGATTCCTTCTTTA
TTGAGTATGGCGGCGGCCGGTTTTATAGCGATTGCTCCTTGGATTGTATGGATCGCCATTGGAGTTGCGTTAGGCGCTAT
GTTTGCAATCATCATTTTAGTTATTAAGGATTTATATAAATGGTTTACCGGAAGTGAATCTGCGATCGGTAAATTTTTAG
GACCTTTTGCGAATATTAAGAAAATGTTTAGGGATTTAATTGACTGGTTTAAATCCCTTCCGGGAAAAATTTTAAGTTCT
CTTGGTGAACTTGGATCGAATATTCAGAAAAAATTAGGTGGAATTTTTCCATTACAATTATTGAAAGTTCTAGGGATTAC
TTCCAGTCAGTCTAGTGACGTAAAGAAAGTAGATGATGCTCTTATTACAAAACAAGGACAGATTGTACAATTTCATCCAG
ACGACAATTTGGTAGCCGTAAAAGACTTAGGGGTGTTAGGCGGATCTAAGTCAAAAAGTGGAGGTAATTCGATCAACATC
AACATCGCTAATGTAGTGTTAGGTTCTGCTTCTACAAAAGAAGAGGCGAACGTGTTTGCATCTTATTTGGAAAAGGAATT
GGAAAAAATTGCTACTAAAATCGGGCTCGGAGCGGGTATTTCACCGGAGGCGGTTTTATGA

Upstream 100 bases:

>100_bases
AAAGTCGGAAGAACTGAAGTTTTTGGCCAGGTTGATTCAAGGTTCTAGTTTTTAATAGTTTCTTAATATTTTAAATAATT
AATATATAAATAAAATAAGA

Downstream 100 bases:

>100_bases
AAATTTTAAATGGTAGGGATAGGGTCGCGCTTACGGACGGAGACGAAGAGGTGGAATTGAATGTCTCTTTGGGTATTCAA
CACTCTTATCCGGTTGAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 606; Mature: 606

Protein sequence:

>606_residues
MDDKNMAEREVNIIIKIDVDSKDAFSEIEKDLKKLKSQIVDFSDATSLTSQRGIKSWKDLTDSVRNFVKGESGLSIFASR
LKTTESNLTSLYSKLKGNVKLENEFFGLARSAGFSERQIAKLDFQLNASARTTTLLSSVFKGFAQIGSYAFNSIIVPSLK
VGIALEKQIGVLKNLSGNEYPKLQDAINNTIQISKGLTTQKELTEAANEAIKTGASVEFISKNLSGLQKVSRLTNQDLIS
SMKGAYKAIEDGSEEFLKSNGALFSSYSAEFKQINESGMSAIDKRLAREKLISAALNENSILQNNYGSHVKNASVILERF
DKTIERLKESFGLLLAKALTPSLNVIGDLIDYFTIGGKSSEYMEDVLVIFGSILVGVLGAIAAQMIVTSGITFGAMIPSL
LSMAAAGFIAIAPWIVWIAIGVALGAMFAIIILVIKDLYKWFTGSESAIGKFLGPFANIKKMFRDLIDWFKSLPGKILSS
LGELGSNIQKKLGGIFPLQLLKVLGITSSQSSDVKKVDDALITKQGQIVQFHPDDNLVAVKDLGVLGGSKSKSGGNSINI
NIANVVLGSASTKEEANVFASYLEKELEKIATKIGLGAGISPEAVL

Sequences:

>Translated_606_residues
MDDKNMAEREVNIIIKIDVDSKDAFSEIEKDLKKLKSQIVDFSDATSLTSQRGIKSWKDLTDSVRNFVKGESGLSIFASR
LKTTESNLTSLYSKLKGNVKLENEFFGLARSAGFSERQIAKLDFQLNASARTTTLLSSVFKGFAQIGSYAFNSIIVPSLK
VGIALEKQIGVLKNLSGNEYPKLQDAINNTIQISKGLTTQKELTEAANEAIKTGASVEFISKNLSGLQKVSRLTNQDLIS
SMKGAYKAIEDGSEEFLKSNGALFSSYSAEFKQINESGMSAIDKRLAREKLISAALNENSILQNNYGSHVKNASVILERF
DKTIERLKESFGLLLAKALTPSLNVIGDLIDYFTIGGKSSEYMEDVLVIFGSILVGVLGAIAAQMIVTSGITFGAMIPSL
LSMAAAGFIAIAPWIVWIAIGVALGAMFAIIILVIKDLYKWFTGSESAIGKFLGPFANIKKMFRDLIDWFKSLPGKILSS
LGELGSNIQKKLGGIFPLQLLKVLGITSSQSSDVKKVDDALITKQGQIVQFHPDDNLVAVKDLGVLGGSKSKSGGNSINI
NIANVVLGSASTKEEANVFASYLEKELEKIATKIGLGAGISPEAVL
>Mature_606_residues
MDDKNMAEREVNIIIKIDVDSKDAFSEIEKDLKKLKSQIVDFSDATSLTSQRGIKSWKDLTDSVRNFVKGESGLSIFASR
LKTTESNLTSLYSKLKGNVKLENEFFGLARSAGFSERQIAKLDFQLNASARTTTLLSSVFKGFAQIGSYAFNSIIVPSLK
VGIALEKQIGVLKNLSGNEYPKLQDAINNTIQISKGLTTQKELTEAANEAIKTGASVEFISKNLSGLQKVSRLTNQDLIS
SMKGAYKAIEDGSEEFLKSNGALFSSYSAEFKQINESGMSAIDKRLAREKLISAALNENSILQNNYGSHVKNASVILERF
DKTIERLKESFGLLLAKALTPSLNVIGDLIDYFTIGGKSSEYMEDVLVIFGSILVGVLGAIAAQMIVTSGITFGAMIPSL
LSMAAAGFIAIAPWIVWIAIGVALGAMFAIIILVIKDLYKWFTGSESAIGKFLGPFANIKKMFRDLIDWFKSLPGKILSS
LGELGSNIQKKLGGIFPLQLLKVLGITSSQSSDVKKVDDALITKQGQIVQFHPDDNLVAVKDLGVLGGSKSKSGGNSINI
NIANVVLGSASTKEEANVFASYLEKELEKIATKIGLGAGISPEAVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65369; Mature: 65369

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDKNMAEREVNIIIKIDVDSKDAFSEIEKDLKKLKSQIVDFSDATSLTSQRGIKSWKDL
CCCCHHHHCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
TDSVRNFVKGESGLSIFASRLKTTESNLTSLYSKLKGNVKLENEFFGLARSAGFSERQIA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHCCCCHHHHH
KLDFQLNASARTTTLLSSVFKGFAQIGSYAFNSIIVPSLKVGIALEKQIGVLKNLSGNEY
HCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHCCCCCCC
PKLQDAINNTIQISKGLTTQKELTEAANEAIKTGASVEFISKNLSGLQKVSRLTNQDLIS
CHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SMKGAYKAIEDGSEEFLKSNGALFSSYSAEFKQINESGMSAIDKRLAREKLISAALNENS
HHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ILQNNYGSHVKNASVILERFDKTIERLKESFGLLLAKALTPSLNVIGDLIDYFTIGGKSS
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCH
EYMEDVLVIFGSILVGVLGAIAAQMIVTSGITFGAMIPSLLSMAAAGFIAIAPWIVWIAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVALGAMFAIIILVIKDLYKWFTGSESAIGKFLGPFANIKKMFRDLIDWFKSLPGKILSS
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHCHHHHHHH
LGELGSNIQKKLGGIFPLQLLKVLGITSSQSSDVKKVDDALITKQGQIVQFHPDDNLVAV
HHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCEEEE
KDLGVLGGSKSKSGGNSININIANVVLGSASTKEEANVFASYLEKELEKIATKIGLGAGI
ECCCCCCCCCCCCCCCEEEEEEHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SPEAVL
CCCCCC
>Mature Secondary Structure
MDDKNMAEREVNIIIKIDVDSKDAFSEIEKDLKKLKSQIVDFSDATSLTSQRGIKSWKDL
CCCCHHHHCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
TDSVRNFVKGESGLSIFASRLKTTESNLTSLYSKLKGNVKLENEFFGLARSAGFSERQIA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHCCCCHHHHH
KLDFQLNASARTTTLLSSVFKGFAQIGSYAFNSIIVPSLKVGIALEKQIGVLKNLSGNEY
HCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHCCCCCCC
PKLQDAINNTIQISKGLTTQKELTEAANEAIKTGASVEFISKNLSGLQKVSRLTNQDLIS
CHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SMKGAYKAIEDGSEEFLKSNGALFSSYSAEFKQINESGMSAIDKRLAREKLISAALNENS
HHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ILQNNYGSHVKNASVILERFDKTIERLKESFGLLLAKALTPSLNVIGDLIDYFTIGGKSS
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCH
EYMEDVLVIFGSILVGVLGAIAAQMIVTSGITFGAMIPSLLSMAAAGFIAIAPWIVWIAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVALGAMFAIIILVIKDLYKWFTGSESAIGKFLGPFANIKKMFRDLIDWFKSLPGKILSS
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHCHHHHHHH
LGELGSNIQKKLGGIFPLQLLKVLGITSSQSSDVKKVDDALITKQGQIVQFHPDDNLVAV
HHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCEEEE
KDLGVLGGSKSKSGGNSININIANVVLGSASTKEEANVFASYLEKELEKIATKIGLGAGI
ECCCCCCCCCCCCCCCEEEEEEHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SPEAVL
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA