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The map label for this gene is 45658445

Identifier: 45658445

GI number: 45658445

Start: 3158370

End: 3159188

Strand: Reverse

Name: 45658445

Synonym: LIC12608

Alternate gene names: NA

Gene position: 3159188-3158370 (Counterclockwise)

Preceding gene: 45658446

Following gene: 45658444

Centisome position: 73.86

GC content: 37.97

Gene sequence:

>819_bases
ATGATCGGTAATCCTAAACTTTTTGGACGTACAGTTTCTTTGGAGATTCTTCCAGCGACTGGAGCTGCAAAAGAGTTTAG
TTATCCTCCTTTTAACTTCGAATTTGAAGCCGAGTTAGACGGACTCAATATAACTCAGGTTACGATGTATAACGTAAACG
AAGAAACGTTGAGTCTTGTAAGCGCTCAGATAAAAGAAAAAAAAATCCAATATCCTTCTGCGTTGTTAAATGCAGGTTAC
AAAGACGAAAATGGGCTCGTTGTTTCCGGAGAAATTATTCATCCTAAGTGGAAACAAGAAGGAACCAATAAAAAGTTGGA
ATTCCAGATCAGCGGAAGCGCTGGCGCTTGGACGAGAGCGTATATTATGAAAACGTACACAAATCTTCCTGCAAGAAATG
TGATCATGGATATTTTAAATCAGGGAAATTTAAAGCCCGGAAGGATTCAATTAGGAGTCAATAAAATTGTGAACTTCAGC
GCCAATACGGAGTTAGGTGATTGTATTCGCCGTTTTTGTAATTTAACAAAATCTCAATATTGGTTTCAAGATGGTCAAAT
TCATTTTGATTCTCTTGATCCTTCTAAAAAAAACAGCGTCATTTTTTTAGATCATTCTTCTGGATTGATCGGAGTTCCAG
AAAAGGGTCAGGATACTTGGAAGGTGACTAGTCTCTTCCGTCACAAGTTTAAGAAGAATATGATCGTGTCCGTAAAAGGA
GGAGGGCTCGATTCGGAATGTAGAATTGTTAGCGGTAAGCATAAATTCTCTACTTTGAGTACGGATTGTTTTTCGGAATT
AGAGGTGAAACCTATATGA

Upstream 100 bases:

>100_bases
CTTTTGATTTAGACGATCTTTACAAGGATGAATTTGAAAACATTCCTGTGAATTTGGAAACTTTCGGTTCCAGAGTAAGA
TTGTATTTAGGAGAAAAACA

Downstream 100 bases:

>100_bases
CTTTAGATAAAGCGATTTTAGCCGCCATTCAAAACAACGTATCTAAGATACAAATTGGTCTTCCTGGAATTATAGAATCT
TTTCAGCCTCAAGATATGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MIGNPKLFGRTVSLEILPATGAAKEFSYPPFNFEFEAELDGLNITQVTMYNVNEETLSLVSAQIKEKKIQYPSALLNAGY
KDENGLVVSGEIIHPKWKQEGTNKKLEFQISGSAGAWTRAYIMKTYTNLPARNVIMDILNQGNLKPGRIQLGVNKIVNFS
ANTELGDCIRRFCNLTKSQYWFQDGQIHFDSLDPSKKNSVIFLDHSSGLIGVPEKGQDTWKVTSLFRHKFKKNMIVSVKG
GGLDSECRIVSGKHKFSTLSTDCFSELEVKPI

Sequences:

>Translated_272_residues
MIGNPKLFGRTVSLEILPATGAAKEFSYPPFNFEFEAELDGLNITQVTMYNVNEETLSLVSAQIKEKKIQYPSALLNAGY
KDENGLVVSGEIIHPKWKQEGTNKKLEFQISGSAGAWTRAYIMKTYTNLPARNVIMDILNQGNLKPGRIQLGVNKIVNFS
ANTELGDCIRRFCNLTKSQYWFQDGQIHFDSLDPSKKNSVIFLDHSSGLIGVPEKGQDTWKVTSLFRHKFKKNMIVSVKG
GGLDSECRIVSGKHKFSTLSTDCFSELEVKPI
>Mature_272_residues
MIGNPKLFGRTVSLEILPATGAAKEFSYPPFNFEFEAELDGLNITQVTMYNVNEETLSLVSAQIKEKKIQYPSALLNAGY
KDENGLVVSGEIIHPKWKQEGTNKKLEFQISGSAGAWTRAYIMKTYTNLPARNVIMDILNQGNLKPGRIQLGVNKIVNFS
ANTELGDCIRRFCNLTKSQYWFQDGQIHFDSLDPSKKNSVIFLDHSSGLIGVPEKGQDTWKVTSLFRHKFKKNMIVSVKG
GGLDSECRIVSGKHKFSTLSTDCFSELEVKPI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30419; Mature: 30419

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGNPKLFGRTVSLEILPATGAAKEFSYPPFNFEFEAELDGLNITQVTMYNVNEETLSLV
CCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEECCHHHHHHH
SAQIKEKKIQYPSALLNAGYKDENGLVVSGEIIHPKWKQEGTNKKLEFQISGSAGAWTRA
HHHHHHHHHCCCHHHHHCCCCCCCCEEEEEEEECCCHHCCCCCCEEEEEECCCCCCHHHH
YIMKTYTNLPARNVIMDILNQGNLKPGRIQLGVNKIVNFSANTELGDCIRRFCNLTKSQY
HHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEHHHEEEECCCCCHHHHHHHHHCCCCCCE
WFQDGQIHFDSLDPSKKNSVIFLDHSSGLIGVPEKGQDTWKVTSLFRHKFKKNMIVSVKG
EEECCCEEECCCCCCCCCCEEEEECCCCEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEC
GGLDSECRIVSGKHKFSTLSTDCFSELEVKPI
CCCCCCEEEEECCCCCEECCHHHHHCCEECCC
>Mature Secondary Structure
MIGNPKLFGRTVSLEILPATGAAKEFSYPPFNFEFEAELDGLNITQVTMYNVNEETLSLV
CCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEECCHHHHHHH
SAQIKEKKIQYPSALLNAGYKDENGLVVSGEIIHPKWKQEGTNKKLEFQISGSAGAWTRA
HHHHHHHHHCCCHHHHHCCCCCCCCEEEEEEEECCCHHCCCCCCEEEEEECCCCCCHHHH
YIMKTYTNLPARNVIMDILNQGNLKPGRIQLGVNKIVNFSANTELGDCIRRFCNLTKSQY
HHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEHHHEEEECCCCCHHHHHHHHHCCCCCCE
WFQDGQIHFDSLDPSKKNSVIFLDHSSGLIGVPEKGQDTWKVTSLFRHKFKKNMIVSVKG
EEECCCEEECCCCCCCCCCEEEEECCCCEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEC
GGLDSECRIVSGKHKFSTLSTDCFSELEVKPI
CCCCCCEEEEECCCCCEECCHHHHHCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA