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The map label for this gene is 45658439

Identifier: 45658439

GI number: 45658439

Start: 3154020

End: 3154895

Strand: Reverse

Name: 45658439

Synonym: LIC12602

Alternate gene names: NA

Gene position: 3154895-3154020 (Counterclockwise)

Preceding gene: 45658440

Following gene: 45658438

Centisome position: 73.76

GC content: 43.95

Gene sequence:

>876_bases
GTGATTATGGCGGTATTCAATCCAGTAAAAACAAGAACTTGGAGCAAAAATACTCCTGCGGATGGGGATCTAATCGACGA
CGAATTTGATCGCCAATATGAAAATTTTCAATATTTAAAAGATCGGATCGACTCGACTGACATAAATTTGGCAAATTTCT
TGATTCCGATCGGAAGTATTATCGAAGACGGTCTGAACCTGGCTCCTTCTATTAACTTTAAGGACGCGAACGCTCAGGCA
ATTTCGAGAAACACATTTGTTACTTTATGGAATTCGGTACATCGAGTAATTACCGGAATCGTTCCCACAACGGATCGGAT
CAGTTGTACAAATCATGGATGTATAGAGGGTCAATTGGTAAAGTTTTCTTTTACAGGGGGAGGAGTTAGTGCATTAGTTA
ATTATTATGTACGCAACCCGACTACAAATGACTTTCAAATTTCTTCTACCGCCACTGGTTCTATTTTAGATCTAACCTCT
TCTCAAACGGGGGAGATGATTATAAATGTGGAATATGGCTTTGGAGACGGTTCAACAACGTATAATGTTCCGGATCGACG
TGGTATATTTGCACGAGGTGCAGGAGTTCATGGGTCGCGATCAAAAGCCGCTGGTGGGAATTATGACGGTGGTGCAGTTG
GATATGCGGGGCAGGATCAGACGCAGCCTCACCTTCACGCTTCGCCTGCAAACGGCGGATTACCATTTGCAGTAATTGGT
AGTGGATCGAGTTGGCTAAACACAGGATCATCGAATTCCGGTGCGAGTTCGCAAACCGGAATTATGGTCTCCGATGGCAC
AAACGGAACACCTCGAACTGGCAACGAAACCACTCCTGCATTCATCGCGGTAAAATACAAAGTGAGGGTTCTATGA

Upstream 100 bases:

>100_bases
AAGAGGATTTAAAACCGGTTCGTGATCGTTTAAAAAAATACGTAGACCAGCCTTTCAAAGTATATGAGAAGTTTATTATA
TTAGAACAAGAGTTAAAGGA

Downstream 100 bases:

>100_bases
AAATTAAATTCATAAATTATAATTTAAAAATATTCTTATTTAGGATTATGAAGCTAAAACAAAAATTTCTTAAATATTTA
AGAAAACCTAGGTTTTTGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MIMAVFNPVKTRTWSKNTPADGDLIDDEFDRQYENFQYLKDRIDSTDINLANFLIPIGSIIEDGLNLAPSINFKDANAQA
ISRNTFVTLWNSVHRVITGIVPTTDRISCTNHGCIEGQLVKFSFTGGGVSALVNYYVRNPTTNDFQISSTATGSILDLTS
SQTGEMIINVEYGFGDGSTTYNVPDRRGIFARGAGVHGSRSKAAGGNYDGGAVGYAGQDQTQPHLHASPANGGLPFAVIG
SGSSWLNTGSSNSGASSQTGIMVSDGTNGTPRTGNETTPAFIAVKYKVRVL

Sequences:

>Translated_291_residues
MIMAVFNPVKTRTWSKNTPADGDLIDDEFDRQYENFQYLKDRIDSTDINLANFLIPIGSIIEDGLNLAPSINFKDANAQA
ISRNTFVTLWNSVHRVITGIVPTTDRISCTNHGCIEGQLVKFSFTGGGVSALVNYYVRNPTTNDFQISSTATGSILDLTS
SQTGEMIINVEYGFGDGSTTYNVPDRRGIFARGAGVHGSRSKAAGGNYDGGAVGYAGQDQTQPHLHASPANGGLPFAVIG
SGSSWLNTGSSNSGASSQTGIMVSDGTNGTPRTGNETTPAFIAVKYKVRVL
>Mature_291_residues
MIMAVFNPVKTRTWSKNTPADGDLIDDEFDRQYENFQYLKDRIDSTDINLANFLIPIGSIIEDGLNLAPSINFKDANAQA
ISRNTFVTLWNSVHRVITGIVPTTDRISCTNHGCIEGQLVKFSFTGGGVSALVNYYVRNPTTNDFQISSTATGSILDLTS
SQTGEMIINVEYGFGDGSTTYNVPDRRGIFARGAGVHGSRSKAAGGNYDGGAVGYAGQDQTQPHLHASPANGGLPFAVIG
SGSSWLNTGSSNSGASSQTGIMVSDGTNGTPRTGNETTPAFIAVKYKVRVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30948; Mature: 30948

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMAVFNPVKTRTWSKNTPADGDLIDDEFDRQYENFQYLKDRIDSTDINLANFLIPIGSI
CEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
IEDGLNLAPSINFKDANAQAISRNTFVTLWNSVHRVITGIVPTTDRISCTNHGCIEGQLV
HHCCCCCCCCCCCCCCCCEEECCCEEEEHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEE
KFSFTGGGVSALVNYYVRNPTTNDFQISSTATGSILDLTSSQTGEMIINVEYGFGDGSTT
EEEECCCCHHHHHHHHCCCCCCCCEEEECCCCCCEEEECCCCCCCEEEEEEECCCCCCEE
YNVPDRRGIFARGAGVHGSRSKAAGGNYDGGAVGYAGQDQTQPHLHASPANGGLPFAVIG
ECCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEECCCCCCCCEEEEE
SGSSWLNTGSSNSGASSQTGIMVSDGTNGTPRTGNETTPAFIAVKYKVRVL
CCCCEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEEEEC
>Mature Secondary Structure
MIMAVFNPVKTRTWSKNTPADGDLIDDEFDRQYENFQYLKDRIDSTDINLANFLIPIGSI
CEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
IEDGLNLAPSINFKDANAQAISRNTFVTLWNSVHRVITGIVPTTDRISCTNHGCIEGQLV
HHCCCCCCCCCCCCCCCCEEECCCEEEEHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEE
KFSFTGGGVSALVNYYVRNPTTNDFQISSTATGSILDLTSSQTGEMIINVEYGFGDGSTT
EEEECCCCHHHHHHHHCCCCCCCCEEEECCCCCCEEEECCCCCCCEEEEEEECCCCCCEE
YNVPDRRGIFARGAGVHGSRSKAAGGNYDGGAVGYAGQDQTQPHLHASPANGGLPFAVIG
ECCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEECCCCCCCCEEEEE
SGSSWLNTGSSNSGASSQTGIMVSDGTNGTPRTGNETTPAFIAVKYKVRVL
CCCCEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA