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The map label for this gene is 45658398

Identifier: 45658398

GI number: 45658398

Start: 3098004

End: 3098771

Strand: Direct

Name: 45658398

Synonym: LIC12557

Alternate gene names: NA

Gene position: 3098004-3098771 (Clockwise)

Preceding gene: 45658397

Following gene: 45658399

Centisome position: 72.43

GC content: 35.29

Gene sequence:

>768_bases
TTGAGACATACCTTCTGTCATCTTCCCGGAATCGATTCCAAGGAAGAAAAAAATCTTTGGGAAAAAGGGATCTACGACTG
GAAGGATCTGGAAATATATCTGAAAACCGAACCGGCCCCTATCCGAAATTTGATCTTAGACGCATTAGAATTTTCTAAAA
AAGAATTAGAGAGAGAAAATTTTTTTTACTTCTTTCACGTATTTTCCCCAAAACACCACTGGAGACTTTTTCCAACAATT
CGGAAAAAACTTCTCTACATGGATATAGAAACCACTGGCTTAGGAAACGACGATAGAACTACAGTCATTGGTACTTTTGA
TGGATACGAATATCGTTCTTATATTCGAGGTTTTAATCTAGATTTTTTTTTGGAGAATCTAAGTCAGGATCAAATTTTTG
TTTCTTATAACGGAATTGCATTCGACGTTCCTTTTTTAGAAAGGGAATTTAACGTACGTTTCCGAAATAACCATATTGAT
ATTATGTTTTTCTTAAGATCCTTAGGAATCAGAGGGGGACTCAAAGGGTGCGAGAAAACGTTAGGTGTTCATAGACCAGA
AACCGCTGCAATCACTGGAATAGAAGCAGTAAATCTTTGGAAACAATACGTAGATTATGATGATATGGACGCGCTTAAAA
TTTTAGAAGAATACAATCGGGAAGACACTGTAAACCTTGAAATCTTATTTATAAAAGGATACAACTTAAAAATCAAAGAA
ACTCCTTTTTATGGGGAAGTAATTCAAGAGCCCTTACAGCTTCGATAA

Upstream 100 bases:

>100_bases
TTTATACCAGATTTGGAAATTCTTTTCTATGGATCTTCTGTATTTTAATTCTGATTTCTCGTCTTATTTTCGTGTCACGA
ATAGAAAGGAAAAGTTAATG

Downstream 100 bases:

>100_bases
GTTTATATTCTTATTATAAACTGAAATCTTTATAAAGACTTAAGTTCGGTAACTCCAATGCGTAAGGAATCGATGCGAAA
AAACTCAGCAGAAATGCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: Exonuclease-Like Protein

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MRHTFCHLPGIDSKEEKNLWEKGIYDWKDLEIYLKTEPAPIRNLILDALEFSKKELERENFFYFFHVFSPKHHWRLFPTI
RKKLLYMDIETTGLGNDDRTTVIGTFDGYEYRSYIRGFNLDFFLENLSQDQIFVSYNGIAFDVPFLEREFNVRFRNNHID
IMFFLRSLGIRGGLKGCEKTLGVHRPETAAITGIEAVNLWKQYVDYDDMDALKILEEYNREDTVNLEILFIKGYNLKIKE
TPFYGEVIQEPLQLR

Sequences:

>Translated_255_residues
MRHTFCHLPGIDSKEEKNLWEKGIYDWKDLEIYLKTEPAPIRNLILDALEFSKKELERENFFYFFHVFSPKHHWRLFPTI
RKKLLYMDIETTGLGNDDRTTVIGTFDGYEYRSYIRGFNLDFFLENLSQDQIFVSYNGIAFDVPFLEREFNVRFRNNHID
IMFFLRSLGIRGGLKGCEKTLGVHRPETAAITGIEAVNLWKQYVDYDDMDALKILEEYNREDTVNLEILFIKGYNLKIKE
TPFYGEVIQEPLQLR
>Mature_255_residues
MRHTFCHLPGIDSKEEKNLWEKGIYDWKDLEIYLKTEPAPIRNLILDALEFSKKELERENFFYFFHVFSPKHHWRLFPTI
RKKLLYMDIETTGLGNDDRTTVIGTFDGYEYRSYIRGFNLDFFLENLSQDQIFVSYNGIAFDVPFLEREFNVRFRNNHID
IMFFLRSLGIRGGLKGCEKTLGVHRPETAAITGIEAVNLWKQYVDYDDMDALKILEEYNREDTVNLEILFIKGYNLKIKE
TPFYGEVIQEPLQLR

Specific function: Unknown

COG id: COG3359

COG function: function code L; Predicted exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30382; Mature: 30382

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHTFCHLPGIDSKEEKNLWEKGIYDWKDLEIYLKTEPAPIRNLILDALEFSKKELEREN
CCCEEECCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCC
FFYFFHVFSPKHHWRLFPTIRKKLLYMDIETTGLGNDDRTTVIGTFDGYEYRSYIRGFNL
EEEEEEEECCCCCEEECHHHHHEEEEEEEEECCCCCCCCEEEEEECCCHHHHHHHCCCCH
DFFLENLSQDQIFVSYNGIAFDVPFLEREFNVRFRNNHIDIMFFLRSLGIRGGLKGCEKT
HHHHHCCCCCEEEEEECCEEEECCCCCCEEEEEEECCCEEEEHHHHHHCCCCCHHHHHHH
LGVHRPETAAITGIEAVNLWKQYVDYDDMDALKILEEYNREDTVNLEILFIKGYNLKIKE
HCCCCCCCCEEECHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEEEEECCCEEEEC
TPFYGEVIQEPLQLR
CCCHHHHHHHHHCCC
>Mature Secondary Structure
MRHTFCHLPGIDSKEEKNLWEKGIYDWKDLEIYLKTEPAPIRNLILDALEFSKKELEREN
CCCEEECCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCC
FFYFFHVFSPKHHWRLFPTIRKKLLYMDIETTGLGNDDRTTVIGTFDGYEYRSYIRGFNL
EEEEEEEECCCCCEEECHHHHHEEEEEEEEECCCCCCCCEEEEEECCCHHHHHHHCCCCH
DFFLENLSQDQIFVSYNGIAFDVPFLEREFNVRFRNNHIDIMFFLRSLGIRGGLKGCEKT
HHHHHCCCCCEEEEEECCEEEECCCCCCEEEEEEECCCEEEEHHHHHHCCCCCHHHHHHH
LGVHRPETAAITGIEAVNLWKQYVDYDDMDALKILEEYNREDTVNLEILFIKGYNLKIKE
HCCCCCCCCEEECHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEEEEECCCEEEEC
TPFYGEVIQEPLQLR
CCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA