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The map label for this gene is lcp [H]

Identifier: 45658365

GI number: 45658365

Start: 3056917

End: 3058035

Strand: Reverse

Name: lcp [H]

Synonym: LIC12523

Alternate gene names: 45658365

Gene position: 3058035-3056917 (Counterclockwise)

Preceding gene: 45658368

Following gene: 45658364

Centisome position: 71.5

GC content: 37.09

Gene sequence:

>1119_bases
ATGCAGAATTTTATAAAATATAGATCCATAACAGACGTTTATGCGGATCAGGTGATACAGGACTATTTTCAATCTGATAA
AAAAGATAAATTGAGAAGTTTAGCTTTATTCAATATTCTAACACAGAATTTCGGACCTATACCAACGGAACTTCCTTCTT
ACTTTAAGGAATACTTTGAAAAAACTAGTGTTCTTCCTGAGTGGGCTGATCTTAAAAAAATTCAAATTGCGGAACGTGTA
TTCGCTACATATGGACCGCAAATACTCATGATTCTATGTTGTAAATCTCTTCCTATGGCTTATACCTGTGGCAACGGAGC
AGAGGTACTTGTATATACAGGAAGGCTGGTGGAAGAAAACGGCTCTACACAAAAAGTATTTAGAAGACTGATGGAAACTA
CACAATTTGTAGTTTCTGTTTTGAAAGAGGGAGGTCTTTCTCAGGGAGGAGAAGGAATCAGAGCCGCACAAAAGGTAAGG
CTGATGCACGCTTCGATTCGTCATTTTATATTTGAATCGAATCAATGGAAAGAAGAGTGGGGCAAACCAATCAATCAACA
GGACATGGCTGGGACCTTACAATCCTTTTCCAGTCTGATTTTAGAAGGATTGGCTTTCTCCGGAATTACGTTAGACGAAG
AGGAAAAAGATTCTTACATACATCTTTGGAAAGTTACAGGTCATATCCTAGGAGTACTTCCTGAATTATCACCTGATACG
TATGAGGATGCTTATGCTCTCGGGCTTTCCATTTTTCAAGATCAAAGAAGGAAATCCGAGGCGGGAAAGATTCTCGCAAA
ATCTCTGTTAGATTTTATGGAATATATGGTTCCAGGAAATTTGTTGGACGGAGTACCTTTGTATTTTCTTCAGAAATATT
TAGGTAAAGAAAATTGTGAAATTTTAGAACTTCCTTGGGAAGAAAAAGAAATTCTAGGAGAAATTCTAGAAAAGGTTATC
ACTGGTTTTGATGAGACGTTAAGCGAGAATGATCATTTCCAGAAACTTGCCGCGCATTTTTCATCCAAACTGATCTTAGG
AATGGATAATTTCTATTACAAAGGTAAGAAGGCTAAGTTTGAAATTCCACCTTCTTTAAAAGGAAACTGGGGAGTATAA

Upstream 100 bases:

>100_bases
CATGTGTAACACTTTATAAGATTTGAATTTCTGAAAAGTTATTTTTCTTTTCACATTTCGGAGGTTTCATAAAGTTTGTG
ACTCCAATGAGGAAAATTGA

Downstream 100 bases:

>100_bases
ATTTATGGGATTTTTGGAAAGAATTTTAACGGACCCTTATTATTTGGGAAAATTCACACTTCTTGAAAACGTATTTTTAC
TGATTGGAGTAGTTTTTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MQNFIKYRSITDVYADQVIQDYFQSDKKDKLRSLALFNILTQNFGPIPTELPSYFKEYFEKTSVLPEWADLKKIQIAERV
FATYGPQILMILCCKSLPMAYTCGNGAEVLVYTGRLVEENGSTQKVFRRLMETTQFVVSVLKEGGLSQGGEGIRAAQKVR
LMHASIRHFIFESNQWKEEWGKPINQQDMAGTLQSFSSLILEGLAFSGITLDEEEKDSYIHLWKVTGHILGVLPELSPDT
YEDAYALGLSIFQDQRRKSEAGKILAKSLLDFMEYMVPGNLLDGVPLYFLQKYLGKENCEILELPWEEKEILGEILEKVI
TGFDETLSENDHFQKLAAHFSSKLILGMDNFYYKGKKAKFEIPPSLKGNWGV

Sequences:

>Translated_372_residues
MQNFIKYRSITDVYADQVIQDYFQSDKKDKLRSLALFNILTQNFGPIPTELPSYFKEYFEKTSVLPEWADLKKIQIAERV
FATYGPQILMILCCKSLPMAYTCGNGAEVLVYTGRLVEENGSTQKVFRRLMETTQFVVSVLKEGGLSQGGEGIRAAQKVR
LMHASIRHFIFESNQWKEEWGKPINQQDMAGTLQSFSSLILEGLAFSGITLDEEEKDSYIHLWKVTGHILGVLPELSPDT
YEDAYALGLSIFQDQRRKSEAGKILAKSLLDFMEYMVPGNLLDGVPLYFLQKYLGKENCEILELPWEEKEILGEILEKVI
TGFDETLSENDHFQKLAAHFSSKLILGMDNFYYKGKKAKFEIPPSLKGNWGV
>Mature_372_residues
MQNFIKYRSITDVYADQVIQDYFQSDKKDKLRSLALFNILTQNFGPIPTELPSYFKEYFEKTSVLPEWADLKKIQIAERV
FATYGPQILMILCCKSLPMAYTCGNGAEVLVYTGRLVEENGSTQKVFRRLMETTQFVVSVLKEGGLSQGGEGIRAAQKVR
LMHASIRHFIFESNQWKEEWGKPINQQDMAGTLQSFSSLILEGLAFSGITLDEEEKDSYIHLWKVTGHILGVLPELSPDT
YEDAYALGLSIFQDQRRKSEAGKILAKSLLDFMEYMVPGNLLDGVPLYFLQKYLGKENCEILELPWEEKEILGEILEKVI
TGFDETLSENDHFQKLAAHFSSKLILGMDNFYYKGKKAKFEIPPSLKGNWGV

Specific function: Responsible for the initial cleavage of poly(cis-1,4- isoprene), which is essential for the process of rubber degradation. Produces clear zones on natural rubber latex overlay agar plates [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018713
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09995 DUF2236 [H]

EC number: NA

Molecular weight: Translated: 42445; Mature: 42445

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNFIKYRSITDVYADQVIQDYFQSDKKDKLRSLALFNILTQNFGPIPTELPSYFKEYFE
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
KTSVLPEWADLKKIQIAERVFATYGPQILMILCCKSLPMAYTCGNGAEVLVYTGRLVEEN
HHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCEEECCCCCEEEEEECCCEECC
GSTQKVFRRLMETTQFVVSVLKEGGLSQGGEGIRAAQKVRLMHASIRHFIFESNQWKEEW
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
GKPINQQDMAGTLQSFSSLILEGLAFSGITLDEEEKDSYIHLWKVTGHILGVLPELSPDT
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCC
YEDAYALGLSIFQDQRRKSEAGKILAKSLLDFMEYMVPGNLLDGVPLYFLQKYLGKENCE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCE
ILELPWEEKEILGEILEKVITGFDETLSENDHFQKLAAHFSSKLILGMDNFYYKGKKAKF
EEECCCHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHCCEEEECCCCEECCCCCEE
EIPPSLKGNWGV
ECCCCCCCCCCC
>Mature Secondary Structure
MQNFIKYRSITDVYADQVIQDYFQSDKKDKLRSLALFNILTQNFGPIPTELPSYFKEYFE
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
KTSVLPEWADLKKIQIAERVFATYGPQILMILCCKSLPMAYTCGNGAEVLVYTGRLVEEN
HHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCEEECCCCCEEEEEECCCEECC
GSTQKVFRRLMETTQFVVSVLKEGGLSQGGEGIRAAQKVRLMHASIRHFIFESNQWKEEW
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
GKPINQQDMAGTLQSFSSLILEGLAFSGITLDEEEKDSYIHLWKVTGHILGVLPELSPDT
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCC
YEDAYALGLSIFQDQRRKSEAGKILAKSLLDFMEYMVPGNLLDGVPLYFLQKYLGKENCE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCE
ILELPWEEKEILGEILEKVITGFDETLSENDHFQKLAAHFSSKLILGMDNFYYKGKKAKF
EEECCCHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHCCEEEECCCCEECCCCCEE
EIPPSLKGNWGV
ECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA