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The map label for this gene is 45658310

Identifier: 45658310

GI number: 45658310

Start: 2986975

End: 2988528

Strand: Direct

Name: 45658310

Synonym: LIC12468

Alternate gene names: NA

Gene position: 2986975-2988528 (Clockwise)

Preceding gene: 45658309

Following gene: 45658311

Centisome position: 69.84

GC content: 38.8

Gene sequence:

>1554_bases
ATGAAAGAAAATTATAATATACTTAATATTCCACAAGACTTAGTCGAAGACCTAACTACGGTGAAAAGAATCAACACCAA
TTCTCAAGGCTGGTTCGATCTCGCTTCCATTCGAGAAATCCAATTCGGTTCCATACAAATCGGCCCGTTTAAGACAAAAG
AAAACGGACAATATTATACAAACTCGTTCGGTCTCATCTTAAACTCGGAGATTTATGATGAAAGTCACGAAATACTCGTT
TGGCTTCCTCGCTTGCAACACTACGGGACCTGGGATTCGAGTCACGACGAACTTCATATTTTCCCCAATCAAACCTGGAC
GAGTATGAAATCCGATTTGATTCCTTTTATAGAAGCTCAGTGGGGAACCTATGAAGGCGCAAATAAAATCAAACACCTAA
CTATAAAAGGGATAAGTAAATATGCGGACGCTTTCGACTTTATTCCTTATCACTTGAATGAAACGGTAGAAAAACTTTCT
GACGACCAATTAATCAATTTTTTGGACCAATACGAAAATACAATCCTTAGACATCCCAATGTTTCCACTTTGGACGAAGC
CTATTTCGCATTAGCAAAAGTTTATTTTCGTCTGGGACAAAAAGATCCCAATCAGAAAAATGTATGGAAAGAAAAATGTC
TTCAAATTTTAAATTATTATCCACAAGGTCGCTTCCATCGAGAGAAGGATGCCGCCGAAATCTGCGTTTGGGCTTCTGCG
GAATTTGGATTGAAAGTTTTTAAAAATCTTCTGGAAAAGGATAAAAGACAACCGGAATACGCCGGTGGAGCCAGCCTCGT
CTCTGCGTTTTTAATACATTTTCCAGATCAATGGGAATCTATCTTAGAAATTTCTAAAGTTAAAACAAATACAATCGGCA
CACTACATTCCATCGAAACTGCAAAAACTTGGGCTCTCAATGTAGCCAATAATGCGCTCGCTGCAAAACTCAAACAAAAT
CAAAATGTTATGGAACTGATTTCTAAACTTCTGACTCAGATCGAAGAATTCATTCTTTCCGCGCCATTAGGAGAATTCTC
CGAACAGGAAATTCACGAAATTCGACACAAAAAGATAGTAGATCGTCTCACTCAAGGCTGGGAGTATTTAAAGAAAAAAG
AATATTCTAAAGTAGAAGAATTACTTAATTCTATATTCGCAGCGTATGAGAAGGATGGAGAGGCGCTTTTTTTAGATGCA
AGACTTTTTTGGTTAAAAAGCGGTTCGGCGGAAGAAGGAATGAAACGAGCCGAAAAAAATTTACTCTTAGCCTCCAATGG
CGACAGATTGGGAAGAGGCAGACTTTACAATCTAATCGGCTGCGCGTTAGACGAATTGGGAAAATGGGAAGAAGCCCTCC
TTTCTTTTCAAAAAGCGGAAGAATTATCTCCCCAAGATTCCATTTATGTGGCAAACCTTGCAGAAATTTTCTGGAAATTA
GGAAATAAAACATCCGCCGGTCGATACGCTAAAAAGGCCAAAAGTATGGGGAATCAATCGGAGATCGTAGAGACGATCTT
TCGAGAAACGACGAAAAATTCCCCAAAAGAATAA

Upstream 100 bases:

>100_bases
CGTTAAATTCGATTGAACTTGAATACCTCGATTATATTCGATCAATATTAGAATAAAGATGCAAGACCTCAAATTAGAAT
CACATTAAAACGAAACAGAT

Downstream 100 bases:

>100_bases
AAAAATGTTTTTTGAAACACAGGACTTGAACGCAGAATAATTTGTTTTATCGTAAGCGACGAAGTTGTAGTAGTCACTCG
TTCCGCAAAAGATAAAACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 517; Mature: 517

Protein sequence:

>517_residues
MKENYNILNIPQDLVEDLTTVKRINTNSQGWFDLASIREIQFGSIQIGPFKTKENGQYYTNSFGLILNSEIYDESHEILV
WLPRLQHYGTWDSSHDELHIFPNQTWTSMKSDLIPFIEAQWGTYEGANKIKHLTIKGISKYADAFDFIPYHLNETVEKLS
DDQLINFLDQYENTILRHPNVSTLDEAYFALAKVYFRLGQKDPNQKNVWKEKCLQILNYYPQGRFHREKDAAEICVWASA
EFGLKVFKNLLEKDKRQPEYAGGASLVSAFLIHFPDQWESILEISKVKTNTIGTLHSIETAKTWALNVANNALAAKLKQN
QNVMELISKLLTQIEEFILSAPLGEFSEQEIHEIRHKKIVDRLTQGWEYLKKKEYSKVEELLNSIFAAYEKDGEALFLDA
RLFWLKSGSAEEGMKRAEKNLLLASNGDRLGRGRLYNLIGCALDELGKWEEALLSFQKAEELSPQDSIYVANLAEIFWKL
GNKTSAGRYAKKAKSMGNQSEIVETIFRETTKNSPKE

Sequences:

>Translated_517_residues
MKENYNILNIPQDLVEDLTTVKRINTNSQGWFDLASIREIQFGSIQIGPFKTKENGQYYTNSFGLILNSEIYDESHEILV
WLPRLQHYGTWDSSHDELHIFPNQTWTSMKSDLIPFIEAQWGTYEGANKIKHLTIKGISKYADAFDFIPYHLNETVEKLS
DDQLINFLDQYENTILRHPNVSTLDEAYFALAKVYFRLGQKDPNQKNVWKEKCLQILNYYPQGRFHREKDAAEICVWASA
EFGLKVFKNLLEKDKRQPEYAGGASLVSAFLIHFPDQWESILEISKVKTNTIGTLHSIETAKTWALNVANNALAAKLKQN
QNVMELISKLLTQIEEFILSAPLGEFSEQEIHEIRHKKIVDRLTQGWEYLKKKEYSKVEELLNSIFAAYEKDGEALFLDA
RLFWLKSGSAEEGMKRAEKNLLLASNGDRLGRGRLYNLIGCALDELGKWEEALLSFQKAEELSPQDSIYVANLAEIFWKL
GNKTSAGRYAKKAKSMGNQSEIVETIFRETTKNSPKE
>Mature_517_residues
MKENYNILNIPQDLVEDLTTVKRINTNSQGWFDLASIREIQFGSIQIGPFKTKENGQYYTNSFGLILNSEIYDESHEILV
WLPRLQHYGTWDSSHDELHIFPNQTWTSMKSDLIPFIEAQWGTYEGANKIKHLTIKGISKYADAFDFIPYHLNETVEKLS
DDQLINFLDQYENTILRHPNVSTLDEAYFALAKVYFRLGQKDPNQKNVWKEKCLQILNYYPQGRFHREKDAAEICVWASA
EFGLKVFKNLLEKDKRQPEYAGGASLVSAFLIHFPDQWESILEISKVKTNTIGTLHSIETAKTWALNVANNALAAKLKQN
QNVMELISKLLTQIEEFILSAPLGEFSEQEIHEIRHKKIVDRLTQGWEYLKKKEYSKVEELLNSIFAAYEKDGEALFLDA
RLFWLKSGSAEEGMKRAEKNLLLASNGDRLGRGRLYNLIGCALDELGKWEEALLSFQKAEELSPQDSIYVANLAEIFWKL
GNKTSAGRYAKKAKSMGNQSEIVETIFRETTKNSPKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59492; Mature: 59492

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKENYNILNIPQDLVEDLTTVKRINTNSQGWFDLASIREIQFGSIQIGPFKTKENGQYYT
CCCCCCEECCCHHHHHHHHHHHHCCCCCCCCEEHHHHHHEEECCEEECCCEECCCCCEEE
NSFGLILNSEIYDESHEILVWLPRLQHYGTWDSSHDELHIFPNQTWTSMKSDLIPFIEAQ
CCCCEEEECHHHCCCCCEEEEEEHHHHCCCCCCCCCEEEECCCCHHHHHHHHCCHHHHCC
WGTYEGANKIKHLTIKGISKYADAFDFIPYHLNETVEKLSDDQLINFLDQYENTILRHPN
CCCCCCCCHHEEEHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCC
VSTLDEAYFALAKVYFRLGQKDPNQKNVWKEKCLQILNYYPQGRFHREKDAAEICVWASA
CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCC
EFGLKVFKNLLEKDKRQPEYAGGASLVSAFLIHFPDQWESILEISKVKTNTIGTLHSIET
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHH
AKTWALNVANNALAAKLKQNQNVMELISKLLTQIEEFILSAPLGEFSEQEIHEIRHKKIV
HHHEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
DRLTQGWEYLKKKEYSKVEELLNSIFAAYEKDGEALFLDARLFWLKSGSAEEGMKRAEKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCHHHHHHHHHHC
LLLASNGDRLGRGRLYNLIGCALDELGKWEEALLSFQKAEELSPQDSIYVANLAEIFWKL
EEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHH
GNKTSAGRYAKKAKSMGNQSEIVETIFRETTKNSPKE
CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKENYNILNIPQDLVEDLTTVKRINTNSQGWFDLASIREIQFGSIQIGPFKTKENGQYYT
CCCCCCEECCCHHHHHHHHHHHHCCCCCCCCEEHHHHHHEEECCEEECCCEECCCCCEEE
NSFGLILNSEIYDESHEILVWLPRLQHYGTWDSSHDELHIFPNQTWTSMKSDLIPFIEAQ
CCCCEEEECHHHCCCCCEEEEEEHHHHCCCCCCCCCEEEECCCCHHHHHHHHCCHHHHCC
WGTYEGANKIKHLTIKGISKYADAFDFIPYHLNETVEKLSDDQLINFLDQYENTILRHPN
CCCCCCCCHHEEEHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCC
VSTLDEAYFALAKVYFRLGQKDPNQKNVWKEKCLQILNYYPQGRFHREKDAAEICVWASA
CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCC
EFGLKVFKNLLEKDKRQPEYAGGASLVSAFLIHFPDQWESILEISKVKTNTIGTLHSIET
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHH
AKTWALNVANNALAAKLKQNQNVMELISKLLTQIEEFILSAPLGEFSEQEIHEIRHKKIV
HHHEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
DRLTQGWEYLKKKEYSKVEELLNSIFAAYEKDGEALFLDARLFWLKSGSAEEGMKRAEKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCHHHHHHHHHHC
LLLASNGDRLGRGRLYNLIGCALDELGKWEEALLSFQKAEELSPQDSIYVANLAEIFWKL
EEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHH
GNKTSAGRYAKKAKSMGNQSEIVETIFRETTKNSPKE
CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA