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The map label for this gene is ygfA [C]

Identifier: 45658300

GI number: 45658300

Start: 2977283

End: 2977813

Strand: Reverse

Name: ygfA [C]

Synonym: LIC12458

Alternate gene names: 45658300

Gene position: 2977813-2977283 (Counterclockwise)

Preceding gene: 45658301

Following gene: 45658299

Centisome position: 69.62

GC content: 36.16

Gene sequence:

>531_bases
TTGAAACTTCAGTCTAGAAACGCACTTCGAACTTTACTTACCCTATTAGAAGAAAGGGAAAAAAAAGACCTCGCTATTCT
CGAATTTTTAAAAGAAATTACATTCGATGCTCGAAAGATCATAGCTTACTCTCCTGATAAATGGGAAGTAAAGGTGGATC
CAAAAGTTTTAGGTTGGGAGCATTCTGGAAAAGAAATTTATTTCCCAAGGATCCAAGACGAAAAATTGGAGTTTATTCTT
CCGGAAGCTTGGGAAAGCGGCCCCTTTGGAATTTTGGAACCTAAAGGAACTAAAACTCTGAATTTTAAAGATGCAGAATG
GATCATAGTTCCTGCCTTAGGTTATGATCAACTTGGTTATCGTTTAGGACGTGGTGGAGGTTTTTATGATAGAACCCTTT
TCGAAATGGATTTTACAAAGTTGATTGGACTTACTTATGAAGAACTTTTTCCGGCAAGTTTTGCAAAGGAAGATCATGAC
ATAAGAGTAGGTACTATAGTTACAGAGAAAAAAATTTATCAAATCGTCTGA

Upstream 100 bases:

>100_bases
AGGTAGAACTAGAAGAAAAAACTCGTAAACTCATTATGATGTTAGAAGAAGGAATCATTGGAGATCTTTGATTTTTCTTT
TGTTTAAAAAGTAATCCTCT

Downstream 100 bases:

>100_bases
AAAAACGCTAAAATCTTGTCTATTTATATCTGCGGCAGTTCAGTAACAAAATGTCAGTCGAGTGTGAAACTTAAGTTGAA
TTTGACCGAGAATGGTGTTC

Product: 5-formyltetrahydrofolate cyclo-ligase

Products: ADP; phosphate; 5,10-methenyltetrahydrofolate

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MKLQSRNALRTLLTLLEEREKKDLAILEFLKEITFDARKIIAYSPDKWEVKVDPKVLGWEHSGKEIYFPRIQDEKLEFIL
PEAWESGPFGILEPKGTKTLNFKDAEWIIVPALGYDQLGYRLGRGGGFYDRTLFEMDFTKLIGLTYEELFPASFAKEDHD
IRVGTIVTEKKIYQIV

Sequences:

>Translated_176_residues
MKLQSRNALRTLLTLLEEREKKDLAILEFLKEITFDARKIIAYSPDKWEVKVDPKVLGWEHSGKEIYFPRIQDEKLEFIL
PEAWESGPFGILEPKGTKTLNFKDAEWIIVPALGYDQLGYRLGRGGGFYDRTLFEMDFTKLIGLTYEELFPASFAKEDHD
IRVGTIVTEKKIYQIV
>Mature_176_residues
MKLQSRNALRTLLTLLEEREKKDLAILEFLKEITFDARKIIAYSPDKWEVKVDPKVLGWEHSGKEIYFPRIQDEKLEFIL
PEAWESGPFGILEPKGTKTLNFKDAEWIIVPALGYDQLGYRLGRGGGFYDRTLFEMDFTKLIGLTYEELFPASFAKEDHD
IRVGTIVTEKKIYQIV

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 6.3.3.2

Molecular weight: Translated: 20478; Mature: 20478

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLQSRNALRTLLTLLEEREKKDLAILEFLKEITFDARKIIAYSPDKWEVKVDPKVLGWE
CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCEEEEECCEEECCC
HSGKEIYFPRIQDEKLEFILPEAWESGPFGILEPKGTKTLNFKDAEWIIVPALGYDQLGY
CCCCEEEECCCCCCCEEEECCCCCCCCCCEEECCCCCEEECCCCCCEEEEECCCCHHHHH
RLGRGGGFYDRTLFEMDFTKLIGLTYEELFPASFAKEDHDIRVGTIVTEKKIYQIV
EECCCCCCCHHHHHHHHHHHHHCCCHHHHCCHHHCCCCCCEEEEEEEECCCCEECC
>Mature Secondary Structure
MKLQSRNALRTLLTLLEEREKKDLAILEFLKEITFDARKIIAYSPDKWEVKVDPKVLGWE
CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCEEEEECCEEECCC
HSGKEIYFPRIQDEKLEFILPEAWESGPFGILEPKGTKTLNFKDAEWIIVPALGYDQLGY
CCCCEEEECCCCCCCEEEECCCCCCCCCCEEECCCCCEEECCCCCCEEEEECCCCHHHHH
RLGRGGGFYDRTLFEMDFTKLIGLTYEELFPASFAKEDHDIRVGTIVTEKKIYQIV
EECCCCCCCHHHHHHHHHHHHHCCCHHHHCCHHHCCCCCCEEEEEEEECCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; 5-formyltetrahydrofolate

Specific reaction: ATP + 5-formyltetrahydrofolate = ADP + phosphate + 5,10-methenyltetrahydrofolate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA