Click here to switch to the map view.

The map label for this gene is 45658282

Identifier: 45658282

GI number: 45658282

Start: 2957365

End: 2957865

Strand: Direct

Name: 45658282

Synonym: LIC12437

Alternate gene names: NA

Gene position: 2957365-2957865 (Clockwise)

Preceding gene: 45658278

Following gene: 45658283

Centisome position: 69.14

GC content: 36.13

Gene sequence:

>501_bases
TTGGCAATTCAAGCCTTACTTACTGAAATGGGAATTGTAATGAATATTGAACTCACCCGGGACCAATACCAAGCTCTATT
AAAATCTTTAGCGATCACAAGATTTTTATATCATTCCATTCTGGATGAAGAGGAACCAGCCGCGGATAGATTGGATTCTT
ACGATACATTCGAAGATATGGAACAGCAAATTCTATCTTATGCAAAAGCAGTGGAAGCTTCTCATATAGTAGCGTATGAT
AAGCAAGAAGAGCTTCATTATCTTACCAGGGAATTCGAAGAAAAAACGGATATTTCCGATCTCATTACAGAATATCAAGA
TAGTATCTTTTGGGATGAACTCATTCAAAGACTCGCCGCAAGAGACTTTTTACGAATCTACGACGAATCCGAAATTAAAG
GAATGGCGATTGAGGAAAGAATCGAAAAAGAAGCCCCTTTCATTTCAAAGTATGAGGAAATTTTTACAGAATCTGGAATT
GAAAACCTAGAAATTAAATAA

Upstream 100 bases:

>100_bases
CTACATTCTAATTTTAACTTTGGATAAATCCAGAAAACTTATATCATCCAAATAGAAACAAGAATAATCAAGATTCAGAC
CGATTCTTGGAGAAATAGAT

Downstream 100 bases:

>100_bases
AAAAGTTCATCCTCAAATCAGATTATTTTCAGGAAAAAATCTTTTACTGCTCCTGATTGATTAAGTATTTTGAATTTTTA
TCGCAAAACATTGTTTCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MAIQALLTEMGIVMNIELTRDQYQALLKSLAITRFLYHSILDEEEPAADRLDSYDTFEDMEQQILSYAKAVEASHIVAYD
KQEELHYLTREFEEKTDISDLITEYQDSIFWDELIQRLAARDFLRIYDESEIKGMAIEERIEKEAPFISKYEEIFTESGI
ENLEIK

Sequences:

>Translated_166_residues
MAIQALLTEMGIVMNIELTRDQYQALLKSLAITRFLYHSILDEEEPAADRLDSYDTFEDMEQQILSYAKAVEASHIVAYD
KQEELHYLTREFEEKTDISDLITEYQDSIFWDELIQRLAARDFLRIYDESEIKGMAIEERIEKEAPFISKYEEIFTESGI
ENLEIK
>Mature_165_residues
AIQALLTEMGIVMNIELTRDQYQALLKSLAITRFLYHSILDEEEPAADRLDSYDTFEDMEQQILSYAKAVEASHIVAYDK
QEELHYLTREFEEKTDISDLITEYQDSIFWDELIQRLAARDFLRIYDESEIKGMAIEERIEKEAPFISKYEEIFTESGIE
NLEIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19563; Mature: 19432

Theoretical pI: Translated: 4.02; Mature: 4.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIQALLTEMGIVMNIELTRDQYQALLKSLAITRFLYHSILDEEEPAADRLDSYDTFEDM
CHHHHHHHHCCHHHEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHH
EQQILSYAKAVEASHIVAYDKQEELHYLTREFEEKTDISDLITEYQDSIFWDELIQRLAA
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
RDFLRIYDESEIKGMAIEERIEKEAPFISKYEEIFTESGIENLEIK
HHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AIQALLTEMGIVMNIELTRDQYQALLKSLAITRFLYHSILDEEEPAADRLDSYDTFEDM
HHHHHHHHCCHHHEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHH
EQQILSYAKAVEASHIVAYDKQEELHYLTREFEEKTDISDLITEYQDSIFWDELIQRLAA
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
RDFLRIYDESEIKGMAIEERIEKEAPFISKYEEIFTESGIENLEIK
HHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA