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The map label for this gene is pilD

Identifier: 45658268

GI number: 45658268

Start: 2942655

End: 2943506

Strand: Direct

Name: pilD

Synonym: LIC12423

Alternate gene names: 45658268

Gene position: 2942655-2943506 (Clockwise)

Preceding gene: 45658267

Following gene: 45658269

Centisome position: 68.8

GC content: 32.98

Gene sequence:

>852_bases
TTGTTGATCTCGCCTGATTCTTTTCCTTTTTGGATAATCCTCGGTTTCGGAAGTTTAGGAGCAGCTTCCTTAGGAAGTTT
TTACGTTACTTTAGGTTTTAGAATATTAGAAACCTATTATGGAAAACAAAGAAAGTCATTAACTTTTTTTCAAAAATGGA
AACGGATTTTCACATTTCCCAGCTCCTGTGACCATTGTGGAAAAAAAATACGTTATCCGGAATTACTTCCAATCATCGGT
TTTTTTATCTCTAAAGGTACATGTAAATATTGTAATAAAAAGATTTATATTCTGTTTCCTTTGGTCGAATTTTTATTCGT
TTGTATTTTTGTCTTTTGTTTTACCATAACAAAAAATCTTTCATTTAGTTTTACATTTTTATTTTTATGTGGCCACCTTC
TGATCTCTTGTTTAACAGACGCATTCCACTTTTCTTTGGACTACGAAAATCTTCCTTGGATTTTATGTTTTGGAGTTATA
TCCATTTTTCTTTTGGACGGCAAACTTCCGAGCCTAAACGATTTATTTGTGTTAGGTGGTTTTTTTTTCACTTTCTTGGT
TTTATTTTTTTTCTTTCCGGGCGGGATTGGATTCGGGGACGTTTTATTCGCCCCAATTTATGCTTTTATAGCAGGCCATC
CCTGGTGGATGTTTTTTTTAAACGCTTCTTATATTCCTGCCGTTTTATTTACAATCATTCTCAGAGAAAGAGGGAAAAGT
ATTCGTAAAACTCCAATTCCAATGGGTTTGTATTTTGGGATCGGATTGTTTTTTACTTTTTTGAGCAGAATTTTTTTTGA
ATCGGACTTGGCCCCATTTACCTTATTTTCAGAATATTCAAATTCTGATTGA

Upstream 100 bases:

>100_bases
TTGATTTTGGTACCTGGATATATTTTTACCAGTTCTAAAAATTACATCCGAATCAGTTTTGCATCCGAATGGGAAAATCT
AAAACGGGGAATCTCGGCGC

Downstream 100 bases:

>100_bases
TTTTTTATTCTGATATATATTAAAAATATATAATATTTTACTCCGAAATAAAAATAGAATTTTGTGTCAAATATTTATGG
CGCTCAATTTTATAGAGTCT

Product: prepilin leader peptidase

Products: NA

Alternate protein names: Type 4 Prepilin-Like Proteins Leader Peptide Processing

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MLISPDSFPFWIILGFGSLGAASLGSFYVTLGFRILETYYGKQRKSLTFFQKWKRIFTFPSSCDHCGKKIRYPELLPIIG
FFISKGTCKYCNKKIYILFPLVEFLFVCIFVFCFTITKNLSFSFTFLFLCGHLLISCLTDAFHFSLDYENLPWILCFGVI
SIFLLDGKLPSLNDLFVLGGFFFTFLVLFFFFPGGIGFGDVLFAPIYAFIAGHPWWMFFLNASYIPAVLFTIILRERGKS
IRKTPIPMGLYFGIGLFFTFLSRIFFESDLAPFTLFSEYSNSD

Sequences:

>Translated_283_residues
MLISPDSFPFWIILGFGSLGAASLGSFYVTLGFRILETYYGKQRKSLTFFQKWKRIFTFPSSCDHCGKKIRYPELLPIIG
FFISKGTCKYCNKKIYILFPLVEFLFVCIFVFCFTITKNLSFSFTFLFLCGHLLISCLTDAFHFSLDYENLPWILCFGVI
SIFLLDGKLPSLNDLFVLGGFFFTFLVLFFFFPGGIGFGDVLFAPIYAFIAGHPWWMFFLNASYIPAVLFTIILRERGKS
IRKTPIPMGLYFGIGLFFTFLSRIFFESDLAPFTLFSEYSNSD
>Mature_283_residues
MLISPDSFPFWIILGFGSLGAASLGSFYVTLGFRILETYYGKQRKSLTFFQKWKRIFTFPSSCDHCGKKIRYPELLPIIG
FFISKGTCKYCNKKIYILFPLVEFLFVCIFVFCFTITKNLSFSFTFLFLCGHLLISCLTDAFHFSLDYENLPWILCFGVI
SIFLLDGKLPSLNDLFVLGGFFFTFLVLFFFFPGGIGFGDVLFAPIYAFIAGHPWWMFFLNASYIPAVLFTIILRERGKS
IRKTPIPMGLYFGIGLFFTFLSRIFFESDLAPFTLFSEYSNSD

Specific function: Unknown

COG id: COG1989

COG function: function code NOU; Type II secretory pathway, prepilin signal peptidase PulO and related peptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32591; Mature: 32591

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCC
>Mature Secondary Structure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CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA