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The map label for this gene is 45658242

Identifier: 45658242

GI number: 45658242

Start: 2902138

End: 2902857

Strand: Reverse

Name: 45658242

Synonym: LIC12396

Alternate gene names: NA

Gene position: 2902857-2902138 (Counterclockwise)

Preceding gene: 45658243

Following gene: 45658241

Centisome position: 67.87

GC content: 37.78

Gene sequence:

>720_bases
TTGGCATCTGCAAAGGTTACACTTTTTCAAAAACACATCAACCGTCCTGTTTCGAACGAACAGAAATCCAAACTTTCCAA
GGAAAAATCGGACTTTTTACTTTTACCGGAATTTTTTCCGTTTTACGATTTATATTCTTCTCCGGAAAATCTTTCTGATA
AATCCAAGATTCTGTCCGACGAACTATTGCAAATTTCTGAATATTATAAAGGTATAATTATCGGCGGTTCGATGTTTAGG
AAAGATTCTTCCGGAGTATTGAGGATCGGCGTTCCGATTGTTCAAGACTTAATGGTCGTAGACTGGTATGATAAACGGGA
ACTTTTTCCGGAAGAAAATTCTGCTTCTGCTGGAGATTCAGAAACGATTTTTATTATGGGAGGTTTTCGTTTTGGGATCG
TGGCTGGAAAAGAAATTCAAAATCCACAACGTTTAAAAGAATTAAAGTCCCAAAACGTGAATCTTCTATTTCACGTCGAT
TTTACTTTAGAATCCGATTCCACTCACGCTCAGGACTTGGAACGTTATGCTAAACTTTCTTCCGAATACGATATTTTTAT
CGCTAGAATTGGCGGAGTGGGTTCGGCTCTCGGTCGTAATTGTGTTGGTAGAAGTCTTTTGTCTACTTCTTCCGGTATTA
ATTGGAAGGTGGCCGAATCCGAAAAAGACAAAGAAGTTATCAAAACTGTAATGATTAACGGTGTGAATGGTTTATTTTGA

Upstream 100 bases:

>100_bases
TGGGGATGGAGCCGAGTCGATGGGAATTCCAGAAAAAATGGATTCGGACTCTCTAGGTATTGACCCTTCTATTTTAGACG
ATTAAAAGGCGAATTTTATT

Downstream 100 bases:

>100_bases
CCTTGAATCGATTCTTACCATTTTTTACTTTTATAATTATATTTCAATTTTGTAATATAAGCATGTCTCAAAAAGATCAG
GTTATAGTTGAAAATTCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MASAKVTLFQKHINRPVSNEQKSKLSKEKSDFLLLPEFFPFYDLYSSPENLSDKSKILSDELLQISEYYKGIIIGGSMFR
KDSSGVLRIGVPIVQDLMVVDWYDKRELFPEENSASAGDSETIFIMGGFRFGIVAGKEIQNPQRLKELKSQNVNLLFHVD
FTLESDSTHAQDLERYAKLSSEYDIFIARIGGVGSALGRNCVGRSLLSTSSGINWKVAESEKDKEVIKTVMINGVNGLF

Sequences:

>Translated_239_residues
MASAKVTLFQKHINRPVSNEQKSKLSKEKSDFLLLPEFFPFYDLYSSPENLSDKSKILSDELLQISEYYKGIIIGGSMFR
KDSSGVLRIGVPIVQDLMVVDWYDKRELFPEENSASAGDSETIFIMGGFRFGIVAGKEIQNPQRLKELKSQNVNLLFHVD
FTLESDSTHAQDLERYAKLSSEYDIFIARIGGVGSALGRNCVGRSLLSTSSGINWKVAESEKDKEVIKTVMINGVNGLF
>Mature_238_residues
ASAKVTLFQKHINRPVSNEQKSKLSKEKSDFLLLPEFFPFYDLYSSPENLSDKSKILSDELLQISEYYKGIIIGGSMFRK
DSSGVLRIGVPIVQDLMVVDWYDKRELFPEENSASAGDSETIFIMGGFRFGIVAGKEIQNPQRLKELKSQNVNLLFHVDF
TLESDSTHAQDLERYAKLSSEYDIFIARIGGVGSALGRNCVGRSLLSTSSGINWKVAESEKDKEVIKTVMINGVNGLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26778; Mature: 26647

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASAKVTLFQKHINRPVSNEQKSKLSKEKSDFLLLPEFFPFYDLYSSPENLSDKSKILSD
CCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCEEECCCCCCHHHHHCCCCCCCHHHHHHHH
ELLQISEYYKGIIIGGSMFRKDSSGVLRIGVPIVQDLMVVDWYDKRELFPEENSASAGDS
HHHHHHHHHCEEEECCHHCCCCCCCEEEECHHHHHHHHHCCCCCCHHCCCCCCCCCCCCC
ETIFIMGGFRFGIVAGKEIQNPQRLKELKSQNVNLLFHVDFTLESDSTHAQDLERYAKLS
CEEEEEECCEEEEEECCCCCCHHHHHHHHHCCCEEEEEEEEEECCCCCHHHHHHHHHHCC
SEYDIFIARIGGVGSALGRNCVGRSLLSTSSGINWKVAESEKDKEVIKTVMINGVNGLF
CCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ASAKVTLFQKHINRPVSNEQKSKLSKEKSDFLLLPEFFPFYDLYSSPENLSDKSKILSD
CCCHHHHHHHHCCCCCCCHHHHHHHHCCCCEEECCCCCCHHHHHCCCCCCCHHHHHHHH
ELLQISEYYKGIIIGGSMFRKDSSGVLRIGVPIVQDLMVVDWYDKRELFPEENSASAGDS
HHHHHHHHHCEEEECCHHCCCCCCCEEEECHHHHHHHHHCCCCCCHHCCCCCCCCCCCCC
ETIFIMGGFRFGIVAGKEIQNPQRLKELKSQNVNLLFHVDFTLESDSTHAQDLERYAKLS
CEEEEEECCEEEEEECCCCCCHHHHHHHHHCCCEEEEEEEEEECCCCCHHHHHHHHHHCC
SEYDIFIARIGGVGSALGRNCVGRSLLSTSSGINWKVAESEKDKEVIKTVMINGVNGLF
CCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA