Definition Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence.
Accession NC_005823
Length 4,277,185

Click here to switch to the map view.

The map label for this gene is 45658218

Identifier: 45658218

GI number: 45658218

Start: 2873930

End: 2874586

Strand: Reverse

Name: 45658218

Synonym: LIC12372

Alternate gene names: NA

Gene position: 2874586-2873930 (Counterclockwise)

Preceding gene: 45658219

Following gene: 45658217

Centisome position: 67.21

GC content: 37.44

Gene sequence:

>657_bases
ATGCAGGAAATTTTTCAGGCGATAGCGAGCGGTCAAAAGGCGAAAGTGATCGGACTATTAAAAAGAGATCCTAACCTTTT
TCAGAGTTTAACCGAAGAAGGAATCACTCCCGTTTTATTCTCTCTTTATTATGGAAAATTAGATATTTCTAAAGAAATTT
ACGAAATCAGTCCCAGTAGAAACCTTTTCGAAGCAGTAGCTTTGGGGGATTTAGAAGAAACAAAAAGATTGATTTCTAAA
TCAACGGATGTGGTCAATTTTCTATCTGCAGATGGTTGGTCTGCGTTACATCTCGCTTCTTATTTCGGTCATTTAGAAAT
TGCAAAATTCTTAATATTTTCAGGAGCAGATCTTAGTCTTACTTCTAAGAGTAAGTTGTCTTATGGAAATACTGCGTTAC
ATTCTGCGGTAGCGACCGGAAAAAAAGAAGTCGTGGAACTTCTTTTGGAAAAAGGGGCGGACTCAAATTCGCTTCAAAAT
CCGGGAGAAATTACACCTTTGCATATCGCCGCAAGTCGATCCGGAAGCGTAGATATTATACGATTACTTTTAAAAAAAGG
AGCGGATAAAAAGTTGATCAGTTCCGAAGGACAAACACCTTATACAATCGCATTTGAAAAAGGAAACATGACAGAAGCGA
AATTATTAGAGGTTTGA

Upstream 100 bases:

>100_bases
TTCATTTTCTGATACTATTTTCATGTACTTGAGTAAGAATTCACTTGAATTTTTTCCAAAAATTAGGTCTAATCCTCTTT
CAAAAAAGAAAAGGTAATCT

Downstream 100 bases:

>100_bases
AAGTTAAATTCTAAGAACTTAACTATAAGATCTGAAAACAATTAAAGTTGGTGATTTCGTTAATTAACTTATAAAATTTG
AGCAGTAAAAATTTTACCGT

Product: ankyrin repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MQEIFQAIASGQKAKVIGLLKRDPNLFQSLTEEGITPVLFSLYYGKLDISKEIYEISPSRNLFEAVALGDLEETKRLISK
STDVVNFLSADGWSALHLASYFGHLEIAKFLIFSGADLSLTSKSKLSYGNTALHSAVATGKKEVVELLLEKGADSNSLQN
PGEITPLHIAASRSGSVDIIRLLLKKGADKKLISSEGQTPYTIAFEKGNMTEAKLLEV

Sequences:

>Translated_218_residues
MQEIFQAIASGQKAKVIGLLKRDPNLFQSLTEEGITPVLFSLYYGKLDISKEIYEISPSRNLFEAVALGDLEETKRLISK
STDVVNFLSADGWSALHLASYFGHLEIAKFLIFSGADLSLTSKSKLSYGNTALHSAVATGKKEVVELLLEKGADSNSLQN
PGEITPLHIAASRSGSVDIIRLLLKKGADKKLISSEGQTPYTIAFEKGNMTEAKLLEV
>Mature_218_residues
MQEIFQAIASGQKAKVIGLLKRDPNLFQSLTEEGITPVLFSLYYGKLDISKEIYEISPSRNLFEAVALGDLEETKRLISK
STDVVNFLSADGWSALHLASYFGHLEIAKFLIFSGADLSLTSKSKLSYGNTALHSAVATGKKEVVELLLEKGADSNSLQN
PGEITPLHIAASRSGSVDIIRLLLKKGADKKLISSEGQTPYTIAFEKGNMTEAKLLEV

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 18 ANK repeats [H]

Homologues:

Organism=Homo sapiens, GI188595682, Length=204, Percent_Identity=31.3725490196078, Blast_Score=82, Evalue=3e-16,
Organism=Homo sapiens, GI52426737, Length=204, Percent_Identity=31.3725490196078, Blast_Score=82, Evalue=3e-16,
Organism=Homo sapiens, GI32967601, Length=147, Percent_Identity=34.6938775510204, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI30425444, Length=158, Percent_Identity=36.0759493670886, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI52426735, Length=206, Percent_Identity=32.5242718446602, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI41350198, Length=130, Percent_Identity=39.2307692307692, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI157743284, Length=152, Percent_Identity=33.5526315789474, Blast_Score=78, Evalue=6e-15,
Organism=Homo sapiens, GI156142199, Length=152, Percent_Identity=32.8947368421053, Blast_Score=77, Evalue=8e-15,
Organism=Homo sapiens, GI156142197, Length=152, Percent_Identity=32.8947368421053, Blast_Score=77, Evalue=8e-15,
Organism=Homo sapiens, GI7705748, Length=130, Percent_Identity=41.5384615384615, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI163914396, Length=130, Percent_Identity=41.5384615384615, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI24233530, Length=184, Percent_Identity=29.8913043478261, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI70780355, Length=202, Percent_Identity=30.6930693069307, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI13376842, Length=162, Percent_Identity=33.3333333333333, Blast_Score=75, Evalue=3e-14,
Organism=Homo sapiens, GI215598574, Length=202, Percent_Identity=30.6930693069307, Blast_Score=75, Evalue=3e-14,
Organism=Homo sapiens, GI70780357, Length=202, Percent_Identity=30.6930693069307, Blast_Score=75, Evalue=3e-14,
Organism=Homo sapiens, GI70780353, Length=202, Percent_Identity=30.6930693069307, Blast_Score=75, Evalue=3e-14,
Organism=Homo sapiens, GI70780359, Length=202, Percent_Identity=30.6930693069307, Blast_Score=75, Evalue=3e-14,
Organism=Homo sapiens, GI38683816, Length=219, Percent_Identity=30.5936073059361, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI38683807, Length=219, Percent_Identity=30.5936073059361, Blast_Score=74, Evalue=7e-14,
Organism=Homo sapiens, GI87239981, Length=145, Percent_Identity=35.1724137931034, Blast_Score=74, Evalue=8e-14,
Organism=Homo sapiens, GI156142184, Length=147, Percent_Identity=36.734693877551, Blast_Score=74, Evalue=9e-14,
Organism=Homo sapiens, GI267844887, Length=218, Percent_Identity=27.5229357798165, Blast_Score=74, Evalue=9e-14,
Organism=Homo sapiens, GI17864094, Length=211, Percent_Identity=31.7535545023697, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI21389427, Length=151, Percent_Identity=34.4370860927152, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI16975496, Length=155, Percent_Identity=32.258064516129, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI7657265, Length=163, Percent_Identity=33.1288343558282, Blast_Score=71, Evalue=6e-13,
Organism=Homo sapiens, GI46519151, Length=214, Percent_Identity=29.9065420560748, Blast_Score=71, Evalue=6e-13,
Organism=Homo sapiens, GI46519154, Length=214, Percent_Identity=29.9065420560748, Blast_Score=71, Evalue=6e-13,
Organism=Homo sapiens, GI4506217, Length=132, Percent_Identity=34.8484848484849, Blast_Score=71, Evalue=9e-13,
Organism=Homo sapiens, GI68131557, Length=184, Percent_Identity=28.2608695652174, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI46519147, Length=219, Percent_Identity=30.1369863013699, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI37620163, Length=219, Percent_Identity=30.1369863013699, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI55741641, Length=216, Percent_Identity=30.5555555555556, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI62988328, Length=128, Percent_Identity=37.5, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI90186267, Length=208, Percent_Identity=27.8846153846154, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI304361760, Length=157, Percent_Identity=29.9363057324841, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI304361757, Length=157, Percent_Identity=29.9363057324841, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI268607595, Length=128, Percent_Identity=37.5, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI7705831, Length=157, Percent_Identity=32.484076433121, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI255982572, Length=157, Percent_Identity=32.484076433121, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI22208951, Length=126, Percent_Identity=35.7142857142857, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI30348954, Length=161, Percent_Identity=32.9192546583851, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI41327754, Length=145, Percent_Identity=31.7241379310345, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI70995267, Length=185, Percent_Identity=30.2702702702703, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI8051595, Length=160, Percent_Identity=30.625, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI8051593, Length=160, Percent_Identity=30.625, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI38327522, Length=120, Percent_Identity=39.1666666666667, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI8051597, Length=160, Percent_Identity=30.625, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI32483404, Length=160, Percent_Identity=30.625, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI8051599, Length=160, Percent_Identity=30.625, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI282394038, Length=151, Percent_Identity=30.4635761589404, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI282394036, Length=151, Percent_Identity=30.4635761589404, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI282394034, Length=151, Percent_Identity=30.4635761589404, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI282394032, Length=151, Percent_Identity=30.4635761589404, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI282394030, Length=151, Percent_Identity=30.4635761589404, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI224465233, Length=140, Percent_Identity=30, Blast_Score=64, Evalue=7e-11,
Organism=Homo sapiens, GI96975023, Length=179, Percent_Identity=29.0502793296089, Blast_Score=64, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI71981389, Length=151, Percent_Identity=35.7615894039735, Blast_Score=87, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI25145251, Length=151, Percent_Identity=35.7615894039735, Blast_Score=87, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI17542700, Length=151, Percent_Identity=35.7615894039735, Blast_Score=87, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI71981414, Length=151, Percent_Identity=35.7615894039735, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI71981411, Length=151, Percent_Identity=35.7615894039735, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI212645194, Length=158, Percent_Identity=36.0759493670886, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17553212, Length=154, Percent_Identity=37.6623376623377, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17540144, Length=186, Percent_Identity=32.258064516129, Blast_Score=69, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6323713, Length=160, Percent_Identity=33.125, Blast_Score=77, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6322079, Length=118, Percent_Identity=37.2881355932203, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI161082092, Length=149, Percent_Identity=36.9127516778523, Blast_Score=87, Evalue=8e-18,
Organism=Drosophila melanogaster, GI161082099, Length=149, Percent_Identity=36.9127516778523, Blast_Score=87, Evalue=9e-18,
Organism=Drosophila melanogaster, GI161082085, Length=149, Percent_Identity=36.9127516778523, Blast_Score=87, Evalue=9e-18,
Organism=Drosophila melanogaster, GI161082089, Length=149, Percent_Identity=36.9127516778523, Blast_Score=86, Evalue=1e-17,
Organism=Drosophila melanogaster, GI161082110, Length=149, Percent_Identity=36.9127516778523, Blast_Score=86, Evalue=1e-17,
Organism=Drosophila melanogaster, GI161082096, Length=149, Percent_Identity=36.9127516778523, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI161082106, Length=149, Percent_Identity=36.9127516778523, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI161082081, Length=149, Percent_Identity=36.9127516778523, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI21356741, Length=149, Percent_Identity=36.9127516778523, Blast_Score=84, Evalue=9e-17,
Organism=Drosophila melanogaster, GI281359521, Length=212, Percent_Identity=27.3584905660377, Blast_Score=78, Evalue=4e-15,
Organism=Drosophila melanogaster, GI281359519, Length=212, Percent_Identity=27.3584905660377, Blast_Score=78, Evalue=4e-15,
Organism=Drosophila melanogaster, GI28558752, Length=212, Percent_Identity=27.3584905660377, Blast_Score=78, Evalue=4e-15,
Organism=Drosophila melanogaster, GI28558750, Length=212, Percent_Identity=27.3584905660377, Blast_Score=78, Evalue=4e-15,
Organism=Drosophila melanogaster, GI28558756, Length=212, Percent_Identity=27.3584905660377, Blast_Score=78, Evalue=4e-15,
Organism=Drosophila melanogaster, GI28558754, Length=212, Percent_Identity=27.3584905660377, Blast_Score=78, Evalue=4e-15,
Organism=Drosophila melanogaster, GI28571867, Length=192, Percent_Identity=31.7708333333333, Blast_Score=74, Evalue=7e-14,
Organism=Drosophila melanogaster, GI28571865, Length=192, Percent_Identity=31.7708333333333, Blast_Score=74, Evalue=7e-14,
Organism=Drosophila melanogaster, GI45552223, Length=224, Percent_Identity=29.0178571428571, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI221472807, Length=224, Percent_Identity=29.0178571428571, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24650843, Length=121, Percent_Identity=36.3636363636364, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI17998549, Length=224, Percent_Identity=29.0178571428571, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI281362364, Length=135, Percent_Identity=35.5555555555556, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI45553307, Length=165, Percent_Identity=35.7575757575758, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24644921, Length=165, Percent_Identity=35.7575757575758, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24644919, Length=165, Percent_Identity=35.7575757575758, Blast_Score=68, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683
- InterPro:   IPR007685 [H]

Pfam domain/function: PF00023 Ank; PF04607 RelA_SpoT [H]

EC number: NA

Molecular weight: Translated: 23691; Mature: 23691

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MQEIFQAIASGQKAKVIGLLKRDPNLFQSLTEEGITPVLFSLYYGKLDISKEIYEISPSR
CHHHHHHHHCCCCEEEEEEHHCCHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHCCCCC
NLFEAVALGDLEETKRLISKSTDVVNFLSADGWSALHLASYFGHLEIAKFLIFSGADLSL
HHHHHHHHCCHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE
TSKSKLSYGNTALHSAVATGKKEVVELLLEKGADSNSLQNPGEITPLHIAASRSGSVDII
CCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCHHHH
RLLLKKGADKKLISSEGQTPYTIAFEKGNMTEAKLLEV
HHHHHCCCCCHHHHCCCCCCEEEEEECCCCCHHHHCCC
>Mature Secondary Structure
MQEIFQAIASGQKAKVIGLLKRDPNLFQSLTEEGITPVLFSLYYGKLDISKEIYEISPSR
CHHHHHHHHCCCCEEEEEEHHCCHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHCCCCC
NLFEAVALGDLEETKRLISKSTDVVNFLSADGWSALHLASYFGHLEIAKFLIFSGADLSL
HHHHHHHHCCHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE
TSKSKLSYGNTALHSAVATGKKEVVELLLEKGADSNSLQNPGEITPLHIAASRSGSVDII
CCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCHHHH
RLLLKKGADKKLISSEGQTPYTIAFEKGNMTEAKLLEV
HHHHHCCCCCHHHHCCCCCCEEEEEECCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA