Click here to switch to the map view.

The map label for this gene is 45658158

Identifier: 45658158

GI number: 45658158

Start: 2786364

End: 2786888

Strand: Direct

Name: 45658158

Synonym: LIC12310

Alternate gene names: NA

Gene position: 2786364-2786888 (Clockwise)

Preceding gene: 45658148

Following gene: 45658159

Centisome position: 65.14

GC content: 38.67

Gene sequence:

>525_bases
ATGGGAAAACTTACCTATTTCAGATTCGCGTATTCTATTGTAAAACGGGATATTACAATCAGTATTCTTCATATTGGATT
TTCTTCCCTATTTTGTTTTTTTCTAATTTTTGGGATTTTTCTACTCAGAATGGACAGAACCCCTTCCAACTCTTCTAGTA
TCGAACTCTTCCGGAATTATCCTCAGTTGGTTTTATTACTCAGTTCTTCCGGATTAGTCTTTATGGCGATTACAAGAACC
CTTCTTAGAACCTCCGACGCAGGAATTATGATGGCAGTCGGAGGAAATCGAATCGGAACGGTTCGACTTTTAGTGTCGGA
ACTTTGGATTTTACATGGAACCGGATTTTTTCTCGGTATTCTTACCACCATATTTTTTCCACCTTGGGTGGCAGAAGGGT
CCAGCTTATTCGATTATGGAAAAGCATTTTTCATCTGTATTTTTCTCATTTCCGGAATTGGATCGATCCTTTCTTTGATT
CTGACATTTTTGGATCCTTACCGATCGATTCGGAGGGGAAAATGA

Upstream 100 bases:

>100_bases
TTTCAGGTTCCAGTTGGTAAATGGATAAAATCCAGGAAATAAATCCGAGCTTTATCCGATTTCAGGATAAAATCGATCAT
TTTACAGAAACGAAAAACCA

Downstream 100 bases:

>100_bases
TTCTTCGCATCAACAACCTCTCTCGAGAATACGGAAAATCGAAGGCGGTTAACGGAGTTTCCTTCGATATGAATCAGTCC
GACTACGTTGCCATCGTAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MGKLTYFRFAYSIVKRDITISILHIGFSSLFCFFLIFGIFLLRMDRTPSNSSSIELFRNYPQLVLLLSSSGLVFMAITRT
LLRTSDAGIMMAVGGNRIGTVRLLVSELWILHGTGFFLGILTTIFFPPWVAEGSSLFDYGKAFFICIFLISGIGSILSLI
LTFLDPYRSIRRGK

Sequences:

>Translated_174_residues
MGKLTYFRFAYSIVKRDITISILHIGFSSLFCFFLIFGIFLLRMDRTPSNSSSIELFRNYPQLVLLLSSSGLVFMAITRT
LLRTSDAGIMMAVGGNRIGTVRLLVSELWILHGTGFFLGILTTIFFPPWVAEGSSLFDYGKAFFICIFLISGIGSILSLI
LTFLDPYRSIRRGK
>Mature_173_residues
GKLTYFRFAYSIVKRDITISILHIGFSSLFCFFLIFGIFLLRMDRTPSNSSSIELFRNYPQLVLLLSSSGLVFMAITRTL
LRTSDAGIMMAVGGNRIGTVRLLVSELWILHGTGFFLGILTTIFFPPWVAEGSSLFDYGKAFFICIFLISGIGSILSLIL
TFLDPYRSIRRGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19564; Mature: 19432

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKLTYFRFAYSIVKRDITISILHIGFSSLFCFFLIFGIFLLRMDRTPSNSSSIELFRNY
CCCHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCC
PQLVLLLSSSGLVFMAITRTLLRTSDAGIMMAVGGNRIGTVRLLVSELWILHGTGFFLGI
CCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHH
LTTIFFPPWVAEGSSLFDYGKAFFICIFLISGIGSILSLILTFLDPYRSIRRGK
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GKLTYFRFAYSIVKRDITISILHIGFSSLFCFFLIFGIFLLRMDRTPSNSSSIELFRNY
CCHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCC
PQLVLLLSSSGLVFMAITRTLLRTSDAGIMMAVGGNRIGTVRLLVSELWILHGTGFFLGI
CCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHH
LTTIFFPPWVAEGSSLFDYGKAFFICIFLISGIGSILSLILTFLDPYRSIRRGK
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA