Click here to switch to the map view.

The map label for this gene is 45658157

Identifier: 45658157

GI number: 45658157

Start: 2784690

End: 2786249

Strand: Reverse

Name: 45658157

Synonym: LIC12309

Alternate gene names: NA

Gene position: 2786249-2784690 (Counterclockwise)

Preceding gene: 45658167

Following gene: 45658156

Centisome position: 65.14

GC content: 38.72

Gene sequence:

>1560_bases
ATGATCTTCATCATTCTTGTCGCCATTGGAATCATACTGATCGTTGCATCTGGATCGTTTTTGATTCAAACTAAAAAGGA
CTCCTATGAAAAGGCGCTAGCGCTGGCGGCTCTGGGAAATTATGTAGACGCACGTGTGATCATTCGAGACATTTTAGACA
ATTCTCCTTCCAACGTAAGAGCTCATTACGTGATCGCAAAAATTTATGCGATGGAAGGAGATACGGTCAACGAAGCCCGT
CATCTAGAAAAAATTAAAAAGATAGGAAACTACGAAAAAGGAATCAACCAAGTCGCCGTTTCCAACCGAATCGCAGATAT
TTACTATCAGCAAGATTTATTTGAAGAAGCTCTATTTCACTATTTGGATACGATTGCGATCGATCCGGAAAATCCAGAAG
CAAACGTTCGAATCGGATTTATGGCTTTGGGGCAAAAAGAATTTATGATCGCGGATCGTTTCTTAGGTAAAATTTCGAAC
GATAAAATTAAAATTCCTTCTCTTTTTATCGGAAAAGGTGTGGTCTCTGCGATTCTTAGAAAAGGGAATCCGGTAGAATT
TTTTGCAAAAGCATACGACCTTGATTCTGCTTCTCCGGTCGGAGGTTTTTTATACGCCCTTAGTTTGACTCGGGATGGAA
AATACGACGAGGCGATTCGGATTGCAAATTCGGTTGCGGATTCAATCGAAGACGACTACGTTCGTTATACGATTTTTCAG
TTTTTAATGTGTTGTTTTATTCTTCAAAAGAATTTAGGAGAAGCTCTCAAACACGCAAGACTTTGTATGGAGATGGCGAG
GACCAACGGTTGGAAACAAGAGATGATCGATTCCGACGTTTACTTTTCTCTTTTAGCGGTAAAACTTGGAAAACTAGAAG
AAGCCAGTGAATATCTCATTGAGGCTGAGTCGGAAAGAATAGACGACCAAAGAATTTTGGAACTGGCGAATTATAAATTT
CAACTGGAGACTAAAAGAACCGACACAGCGAAGAACGGAAATTTTTCTTTGGACGATGAGATTGCTAGAATTTTTGGAGA
ACTTTTTCCAGTAGAACGTTTTTATGAACTCTCCGGACTTAAATCTTCTAAATCTTTTCATATCAAAGGAATTTTAGACG
ATCAAGGAAATAAGGTTCTTTCGGACGTCTCTAAAATTGGAATCGGGGTACTGGATCATTATCGTCAATTGAAAGGTGTG
GATTTCAAAAATCTTTGTGTTCGAATTGTTATGGCTTTGAATTATACGGTCAGTAGAGAAGTTCCTAATAAGGAAGGTGA
CGGTCTCAACCTCGCCGGTTTGAATAAAGCAGATAAGGAAACTCGTTCTTTATTTAAATTTCGCAAATGGAAGGACGCAA
AGATTTCGGATATATTTTTAAGAGATACAATCGCTCAGTTGAGCGAATTGAGTTTGGATAAGGCGTTTATCGTTGGAGAT
GCTGAGTTTACGGAAGGGGCTAAACGGTTTCTTTCTGAAAATTCTTCTTTGTTAAACGTAATCAGTGGTAAAGATTTAGA
AGAACTTTTGAAAAAGGCTCTTCGACAAGAAGGTAAGTGA

Upstream 100 bases:

>100_bases
TGTAAAATGATCGATTTTATCCTGAAATCGGATAAAGCTCGGATTTATTTCCTGGATTTTATCCATTTACCAACTGGAAC
CTGAAAGAAAAACAAAAAAA

Downstream 100 bases:

>100_bases
ATCGTTCGGATTGAACCTGAATAGAACTTTGTTTCTTTTTTGAATTTCATCTATACAATTACGATTTGTAAAAACTTCTG
TAATTTTACAAATTCAATAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 519; Mature: 519

Protein sequence:

>519_residues
MIFIILVAIGIILIVASGSFLIQTKKDSYEKALALAALGNYVDARVIIRDILDNSPSNVRAHYVIAKIYAMEGDTVNEAR
HLEKIKKIGNYEKGINQVAVSNRIADIYYQQDLFEEALFHYLDTIAIDPENPEANVRIGFMALGQKEFMIADRFLGKISN
DKIKIPSLFIGKGVVSAILRKGNPVEFFAKAYDLDSASPVGGFLYALSLTRDGKYDEAIRIANSVADSIEDDYVRYTIFQ
FLMCCFILQKNLGEALKHARLCMEMARTNGWKQEMIDSDVYFSLLAVKLGKLEEASEYLIEAESERIDDQRILELANYKF
QLETKRTDTAKNGNFSLDDEIARIFGELFPVERFYELSGLKSSKSFHIKGILDDQGNKVLSDVSKIGIGVLDHYRQLKGV
DFKNLCVRIVMALNYTVSREVPNKEGDGLNLAGLNKADKETRSLFKFRKWKDAKISDIFLRDTIAQLSELSLDKAFIVGD
AEFTEGAKRFLSENSSLLNVISGKDLEELLKKALRQEGK

Sequences:

>Translated_519_residues
MIFIILVAIGIILIVASGSFLIQTKKDSYEKALALAALGNYVDARVIIRDILDNSPSNVRAHYVIAKIYAMEGDTVNEAR
HLEKIKKIGNYEKGINQVAVSNRIADIYYQQDLFEEALFHYLDTIAIDPENPEANVRIGFMALGQKEFMIADRFLGKISN
DKIKIPSLFIGKGVVSAILRKGNPVEFFAKAYDLDSASPVGGFLYALSLTRDGKYDEAIRIANSVADSIEDDYVRYTIFQ
FLMCCFILQKNLGEALKHARLCMEMARTNGWKQEMIDSDVYFSLLAVKLGKLEEASEYLIEAESERIDDQRILELANYKF
QLETKRTDTAKNGNFSLDDEIARIFGELFPVERFYELSGLKSSKSFHIKGILDDQGNKVLSDVSKIGIGVLDHYRQLKGV
DFKNLCVRIVMALNYTVSREVPNKEGDGLNLAGLNKADKETRSLFKFRKWKDAKISDIFLRDTIAQLSELSLDKAFIVGD
AEFTEGAKRFLSENSSLLNVISGKDLEELLKKALRQEGK
>Mature_519_residues
MIFIILVAIGIILIVASGSFLIQTKKDSYEKALALAALGNYVDARVIIRDILDNSPSNVRAHYVIAKIYAMEGDTVNEAR
HLEKIKKIGNYEKGINQVAVSNRIADIYYQQDLFEEALFHYLDTIAIDPENPEANVRIGFMALGQKEFMIADRFLGKISN
DKIKIPSLFIGKGVVSAILRKGNPVEFFAKAYDLDSASPVGGFLYALSLTRDGKYDEAIRIANSVADSIEDDYVRYTIFQ
FLMCCFILQKNLGEALKHARLCMEMARTNGWKQEMIDSDVYFSLLAVKLGKLEEASEYLIEAESERIDDQRILELANYKF
QLETKRTDTAKNGNFSLDDEIARIFGELFPVERFYELSGLKSSKSFHIKGILDDQGNKVLSDVSKIGIGVLDHYRQLKGV
DFKNLCVRIVMALNYTVSREVPNKEGDGLNLAGLNKADKETRSLFKFRKWKDAKISDIFLRDTIAQLSELSLDKAFIVGD
AEFTEGAKRFLSENSSLLNVISGKDLEELLKKALRQEGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58474; Mature: 58474

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFIILVAIGIILIVASGSFLIQTKKDSYEKALALAALGNYVDARVIIRDILDNSPSNVR
CHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
AHYVIAKIYAMEGDTVNEARHLEKIKKIGNYEKGINQVAVSNRIADIYYQQDLFEEALFH
CEEEEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLDTIAIDPENPEANVRIGFMALGQKEFMIADRFLGKISNDKIKIPSLFIGKGVVSAILR
HHHHEEECCCCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHH
KGNPVEFFAKAYDLDSASPVGGFLYALSLTRDGKYDEAIRIANSVADSIEDDYVRYTIFQ
CCCCHHHHHHHHCCCCCCCCCHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FLMCCFILQKNLGEALKHARLCMEMARTNGWKQEMIDSDVYFSLLAVKLGKLEEASEYLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHCHHHHHHHHH
EAESERIDDQRILELANYKFQLETKRTDTAKNGNFSLDDEIARIFGELFPVERFYELSGL
HHHHHHCCHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCC
KSSKSFHIKGILDDQGNKVLSDVSKIGIGVLDHYRQLKGVDFKNLCVRIVMALNYTVSRE
CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHCCC
VPNKEGDGLNLAGLNKADKETRSLFKFRKWKDAKISDIFLRDTIAQLSELSLDKAFIVGD
CCCCCCCCCEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEECC
AEFTEGAKRFLSENSSLLNVISGKDLEELLKKALRQEGK
HHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MIFIILVAIGIILIVASGSFLIQTKKDSYEKALALAALGNYVDARVIIRDILDNSPSNVR
CHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
AHYVIAKIYAMEGDTVNEARHLEKIKKIGNYEKGINQVAVSNRIADIYYQQDLFEEALFH
CEEEEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLDTIAIDPENPEANVRIGFMALGQKEFMIADRFLGKISNDKIKIPSLFIGKGVVSAILR
HHHHEEECCCCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHH
KGNPVEFFAKAYDLDSASPVGGFLYALSLTRDGKYDEAIRIANSVADSIEDDYVRYTIFQ
CCCCHHHHHHHHCCCCCCCCCHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FLMCCFILQKNLGEALKHARLCMEMARTNGWKQEMIDSDVYFSLLAVKLGKLEEASEYLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHCHHHHHHHHH
EAESERIDDQRILELANYKFQLETKRTDTAKNGNFSLDDEIARIFGELFPVERFYELSGL
HHHHHHCCHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCC
KSSKSFHIKGILDDQGNKVLSDVSKIGIGVLDHYRQLKGVDFKNLCVRIVMALNYTVSRE
CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHCCC
VPNKEGDGLNLAGLNKADKETRSLFKFRKWKDAKISDIFLRDTIAQLSELSLDKAFIVGD
CCCCCCCCCEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEECC
AEFTEGAKRFLSENSSLLNVISGKDLEELLKKALRQEGK
HHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA