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The map label for this gene is 45658155

Identifier: 45658155

GI number: 45658155

Start: 2781437

End: 2782897

Strand: Reverse

Name: 45658155

Synonym: LIC12307

Alternate gene names: NA

Gene position: 2782897-2781437 (Counterclockwise)

Preceding gene: 45658156

Following gene: 45658154

Centisome position: 65.06

GC content: 37.85

Gene sequence:

>1461_bases
ATGGTATCTTCACAGAATGTTTTAGTGGCTTTGGCCTTTGGTATTTTTCTCGGACTAAATCCCTTTTCTCAGATTGACTC
GGAAGTGATTCCTCTTGAATTTCCATTTCCAACGGAAGAAGAAAGAAAAAAAAACGGATTGGGGTCCGAAACAACTACAG
GCCCTAATAAATCCCCAAATTTACAGGAAGTACAAACTCAAACACAAGATGCTACAAATTCGGCTTCCTTTGCCGGGAAA
ATCGTAGACTGGGACGTGGAAAAATTAACCGAATATGCGGTTGCAAATAATCCACTTTATCTTGCAGAAAAACAAAATAT
GGGAATCGAAAGAGGAAAGGTAATTACCGCTTCTCTTTATCGAAATCCGGTCATACAATATCAACAACAGTTTATAGGAA
TGCCCGGAGGAGGCTCTTCCGGACCACAGATTTTAGGAGCCAACGGATCTCAAGGGGGAAATACAGAAGTTGCCCCTGCA
CTTTATCAGGATTTAGACGTATACGGAATCATTTCACTTAGGTCCAAGGTTGCTAAAAAATCTTTCGAAGCGGTTTTAGG
AGAATTCGATAACTTTGATAGACTTTTTAGGCTTAGGCTTAGGCAAAACTATTGGGCTTATTTATTTCTTACTAATTTAG
TAGATTATAATAAAGAATTTTACGAAAATTACAGTGATCTTTTGGAGCTTACTAAGTTTCGAGTAGAAAAAGGGGACATT
TCTCCTCTTGAATATGAAAGACTTGAATTGGAAAGAATCCAGGTGGAAAAATTTTATAGGGACGCACTCGTTCGAAGACA
ATTTGTGGAAAAAGAACTTAGAATCCTTTCCGGAATTCGTGAATCGGAAGGAATTTTCGCGTTTAAAACGGAAATGAAGT
TCAAATCTTTAGAAGACCTAGGACTTAAATTGAAGGACTCTTCTGTTGCATCCGTAAACCGTCCTGACTTAGCTGCACTT
GAAGAAAGGGTAAAAGAGAAAAAATTAAATATAGATCTTCAGAGAAGAGAGGCTTTAGGTTATCTACAGGTAGGAGGAGA
ATGGAGAATCAAAGGTAATGAACACTACGCCGGAGTTTTTGCTACGATCCCACTTCCCTTAAACGACAGGGGGCAAGGAA
AGGTTCTTTCCGCAAAAGAAGAACATAGAAAATTTGAACTTGCACTCGAAGCGAAAAAAAGAGAAGTGAACGAAGAAATT
GAGGCATCTAAAAAGGAACTACTCGCAAGGGAAGACCTTCTTGCAAAATACGAAAGAATTAATCTATTACAAAAAAATAA
ACAACTGGAACAAAAATCTAGGATTGCTTACGTAAGAGGAGCATCCGATCAGGTGACCTTTTTACAGGCTGAAAAAAATT
ATCTTACTGTATTAAGAGATTATTATGAAGTGTTGTATCTATATTACAACGCGGTTGAAATTTATAAGGCTGCAGTCGGA
AAAAAAATGGAGAGGGACTAA

Upstream 100 bases:

>100_bases
ATGAAAGTATGACAGAATGCGAATTAAAATTTAGATTTAAAGAAAATACGGAATGGGAGAAAGAACTTATCAATCCATAT
TTTAAAAAAGTGCAGGGAAA

Downstream 100 bases:

>100_bases
AAAACTTCGGAGATTCTATGATCCAAATCATAAAAAGATATAAATTTATTCTGGTTCTTCTCGCGGTTTTAAGTACGGGA
TATTTAGGGTATAAAAAATT

Product: TolC superfamily outer membrane protein

Products: NA

Alternate protein names: LC Superfamily Outer Membrane Protein; LC Related Protein; Cation Efflux System Protein CzcC

Number of amino acids: Translated: 486; Mature: 486

Protein sequence:

>486_residues
MVSSQNVLVALAFGIFLGLNPFSQIDSEVIPLEFPFPTEEERKKNGLGSETTTGPNKSPNLQEVQTQTQDATNSASFAGK
IVDWDVEKLTEYAVANNPLYLAEKQNMGIERGKVITASLYRNPVIQYQQQFIGMPGGGSSGPQILGANGSQGGNTEVAPA
LYQDLDVYGIISLRSKVAKKSFEAVLGEFDNFDRLFRLRLRQNYWAYLFLTNLVDYNKEFYENYSDLLELTKFRVEKGDI
SPLEYERLELERIQVEKFYRDALVRRQFVEKELRILSGIRESEGIFAFKTEMKFKSLEDLGLKLKDSSVASVNRPDLAAL
EERVKEKKLNIDLQRREALGYLQVGGEWRIKGNEHYAGVFATIPLPLNDRGQGKVLSAKEEHRKFELALEAKKREVNEEI
EASKKELLAREDLLAKYERINLLQKNKQLEQKSRIAYVRGASDQVTFLQAEKNYLTVLRDYYEVLYLYYNAVEIYKAAVG
KKMERD

Sequences:

>Translated_486_residues
MVSSQNVLVALAFGIFLGLNPFSQIDSEVIPLEFPFPTEEERKKNGLGSETTTGPNKSPNLQEVQTQTQDATNSASFAGK
IVDWDVEKLTEYAVANNPLYLAEKQNMGIERGKVITASLYRNPVIQYQQQFIGMPGGGSSGPQILGANGSQGGNTEVAPA
LYQDLDVYGIISLRSKVAKKSFEAVLGEFDNFDRLFRLRLRQNYWAYLFLTNLVDYNKEFYENYSDLLELTKFRVEKGDI
SPLEYERLELERIQVEKFYRDALVRRQFVEKELRILSGIRESEGIFAFKTEMKFKSLEDLGLKLKDSSVASVNRPDLAAL
EERVKEKKLNIDLQRREALGYLQVGGEWRIKGNEHYAGVFATIPLPLNDRGQGKVLSAKEEHRKFELALEAKKREVNEEI
EASKKELLAREDLLAKYERINLLQKNKQLEQKSRIAYVRGASDQVTFLQAEKNYLTVLRDYYEVLYLYYNAVEIYKAAVG
KKMERD
>Mature_486_residues
MVSSQNVLVALAFGIFLGLNPFSQIDSEVIPLEFPFPTEEERKKNGLGSETTTGPNKSPNLQEVQTQTQDATNSASFAGK
IVDWDVEKLTEYAVANNPLYLAEKQNMGIERGKVITASLYRNPVIQYQQQFIGMPGGGSSGPQILGANGSQGGNTEVAPA
LYQDLDVYGIISLRSKVAKKSFEAVLGEFDNFDRLFRLRLRQNYWAYLFLTNLVDYNKEFYENYSDLLELTKFRVEKGDI
SPLEYERLELERIQVEKFYRDALVRRQFVEKELRILSGIRESEGIFAFKTEMKFKSLEDLGLKLKDSSVASVNRPDLAAL
EERVKEKKLNIDLQRREALGYLQVGGEWRIKGNEHYAGVFATIPLPLNDRGQGKVLSAKEEHRKFELALEAKKREVNEEI
EASKKELLAREDLLAKYERINLLQKNKQLEQKSRIAYVRGASDQVTFLQAEKNYLTVLRDYYEVLYLYYNAVEIYKAAVG
KKMERD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55595; Mature: 55595

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSSQNVLVALAFGIFLGLNPFSQIDSEVIPLEFPFPTEEERKKNGLGSETTTGPNKSPN
CCCCCHHHHHHHHHHHHCCCCHHHCCCCEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCC
LQEVQTQTQDATNSASFAGKIVDWDVEKLTEYAVANNPLYLAEKQNMGIERGKVITASLY
HHHHHHHHHCCCCCHHHCCCEECCCHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEHHHH
RNPVIQYQQQFIGMPGGGSSGPQILGANGSQGGNTEVAPALYQDLDVYGIISLRSKVAKK
HCHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHCCCCEEHHHHHHHHHHH
SFEAVLGEFDNFDRLFRLRLRQNYWAYLFLTNLVDYNKEFYENYSDLLELTKFRVEKGDI
HHHHHHHCCCCHHHHHHHHHHCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC
SPLEYERLELERIQVEKFYRDALVRRQFVEKELRILSGIRESEGIFAFKTEMKFKSLEDL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHC
GLKLKDSSVASVNRPDLAALEERVKEKKLNIDLQRREALGYLQVGGEWRIKGNEHYAGVF
CCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHCCCEEEECCEEEECCCCEEEEEE
ATIPLPLNDRGQGKVLSAKEEHRKFELALEAKKREVNEEIEASKKELLAREDLLAKYERI
EEECCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLLQKNKQLEQKSRIAYVRGASDQVTFLQAEKNYLTVLRDYYEVLYLYYNAVEIYKAAVG
HHHHHHHHHHHHHCEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKMERD
HHCCCC
>Mature Secondary Structure
MVSSQNVLVALAFGIFLGLNPFSQIDSEVIPLEFPFPTEEERKKNGLGSETTTGPNKSPN
CCCCCHHHHHHHHHHHHCCCCHHHCCCCEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCC
LQEVQTQTQDATNSASFAGKIVDWDVEKLTEYAVANNPLYLAEKQNMGIERGKVITASLY
HHHHHHHHHCCCCCHHHCCCEECCCHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEHHHH
RNPVIQYQQQFIGMPGGGSSGPQILGANGSQGGNTEVAPALYQDLDVYGIISLRSKVAKK
HCHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHCCCCEEHHHHHHHHHHH
SFEAVLGEFDNFDRLFRLRLRQNYWAYLFLTNLVDYNKEFYENYSDLLELTKFRVEKGDI
HHHHHHHCCCCHHHHHHHHHHCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC
SPLEYERLELERIQVEKFYRDALVRRQFVEKELRILSGIRESEGIFAFKTEMKFKSLEDL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHC
GLKLKDSSVASVNRPDLAALEERVKEKKLNIDLQRREALGYLQVGGEWRIKGNEHYAGVF
CCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHCCCEEEECCEEEECCCCEEEEEE
ATIPLPLNDRGQGKVLSAKEEHRKFELALEAKKREVNEEIEASKKELLAREDLLAKYERI
EEECCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLLQKNKQLEQKSRIAYVRGASDQVTFLQAEKNYLTVLRDYYEVLYLYYNAVEIYKAAVG
HHHHHHHHHHHHHCEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKMERD
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA