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The map label for this gene is lexA

Identifier: 45658153

GI number: 45658153

Start: 2779574

End: 2780194

Strand: Reverse

Name: lexA

Synonym: LIC12305

Alternate gene names: 45658153

Gene position: 2780194-2779574 (Counterclockwise)

Preceding gene: 45658154

Following gene: 45658152

Centisome position: 65.0

GC content: 41.55

Gene sequence:

>621_bases
TTGTTTAGTATGAAAGACCTGACAGACAAACAACAGGCTGTTCTTGCATTTATCACAGCAATCATCAAAGAGCGCGGTTT
TCCACCTACGATTCGAGAAATTGGAGACGAGTTCGGAATTACGGCAAAGGGTGCCTACGATCATCTCAAAGCAATTGAGA
AAAAAGGTTATCTCAAGACCGCAAAGAACCAATCCAGGGCTATAGAACTCATTCGTCAAAGTCCTATGGAATCACTTCCC
GTTCAGGCCACAAGTATTCCTGTCATCGGTCAAGTGGCGGCTGGGCTTCCTATTTTTGCGGAAGAAAATATAGAGTCTTA
CATTCCGGTTCCAGACGAGATGGCTAAAGGAAATGTTCCTATGTATGCACTTCGTGTTCAGGGAGATTCCATGATTGAAG
TAGGGATCAATGATGGAGACATTGCAATTATAGAAAAGAGAGACATCGCTCGAAATGGAGAGATTGTAGTTGCACTGATC
GAAGACGAGGCTACTTTGAAAGTATATTATAAAGAGCAGGATCAGATTCGTTTAGAAGCTAGAAATCCAAAATACAAACC
GATTAAAACTAAGAAAGCGACTGTCATGGGAAAGCTGATCGGTTTATATCGAATTTACTGA

Upstream 100 bases:

>100_bases
GCAGAGATCGTTTCTAGAGGATCCTTTATTCTTAAAAGTGAATATTTAAAGCTTTGATTTTACTATTTTTGTGTTGACTT
AGCATCTATTCACTACTAAG

Downstream 100 bases:

>100_bases
TTGACAGAGTGAGAAACTCAACTGAGACTTCGGACAGAGTGTATCCACGAAAACTTTTCCTTTTTGTACTTCTTCTTTTT
GTATTTCAATGCAGTTCTCC

Product: LexA repressor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MFSMKDLTDKQQAVLAFITAIIKERGFPPTIREIGDEFGITAKGAYDHLKAIEKKGYLKTAKNQSRAIELIRQSPMESLP
VQATSIPVIGQVAAGLPIFAEENIESYIPVPDEMAKGNVPMYALRVQGDSMIEVGINDGDIAIIEKRDIARNGEIVVALI
EDEATLKVYYKEQDQIRLEARNPKYKPIKTKKATVMGKLIGLYRIY

Sequences:

>Translated_206_residues
MFSMKDLTDKQQAVLAFITAIIKERGFPPTIREIGDEFGITAKGAYDHLKAIEKKGYLKTAKNQSRAIELIRQSPMESLP
VQATSIPVIGQVAAGLPIFAEENIESYIPVPDEMAKGNVPMYALRVQGDSMIEVGINDGDIAIIEKRDIARNGEIVVALI
EDEATLKVYYKEQDQIRLEARNPKYKPIKTKKATVMGKLIGLYRIY
>Mature_206_residues
MFSMKDLTDKQQAVLAFITAIIKERGFPPTIREIGDEFGITAKGAYDHLKAIEKKGYLKTAKNQSRAIELIRQSPMESLP
VQATSIPVIGQVAAGLPIFAEENIESYIPVPDEMAKGNVPMYALRVQGDSMIEVGINDGDIAIIEKRDIARNGEIVVALI
EDEATLKVYYKEQDQIRLEARNPKYKPIKTKKATVMGKLIGLYRIY

Specific function: Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, recA interacts with lexA causing an autocatalytic cleavage which disrupts the DNA-binding part of lexA, lea

COG id: COG1974

COG function: function code KT; SOS-response transcriptional repressors (RecA-mediated autopeptidases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S24 family [H]

Homologues:

Organism=Escherichia coli, GI1790476, Length=206, Percent_Identity=35.4368932038835, Blast_Score=122, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006199
- InterPro:   IPR006200
- InterPro:   IPR006197
- InterPro:   IPR019759
- InterPro:   IPR015927
- InterPro:   IPR011056
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01726 LexA_DNA_bind; PF00717 Peptidase_S24 [H]

EC number: =3.4.21.88 [H]

Molecular weight: Translated: 22985; Mature: 22985

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSMKDLTDKQQAVLAFITAIIKERGFPPTIREIGDEFGITAKGAYDHLKAIEKKGYLKT
CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEECCHHHHHHHHHHCCCHHC
AKNQSRAIELIRQSPMESLPVQATSIPVIGQVAAGLPIFAEENIESYIPVPDEMAKGNVP
CCCHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHCCCCEEECCCCCCCCCCCHHHHCCCCC
MYALRVQGDSMIEVGINDGDIAIIEKRDIARNGEIVVALIEDEATLKVYYKEQDQIRLEA
EEEEEECCCCEEEEECCCCCEEEEECCCCCCCCCEEEEEECCCCEEEEEEECCCEEEEEE
RNPKYKPIKTKKATVMGKLIGLYRIY
CCCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFSMKDLTDKQQAVLAFITAIIKERGFPPTIREIGDEFGITAKGAYDHLKAIEKKGYLKT
CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEECCHHHHHHHHHHCCCHHC
AKNQSRAIELIRQSPMESLPVQATSIPVIGQVAAGLPIFAEENIESYIPVPDEMAKGNVP
CCCHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHCCCCEEECCCCCCCCCCCHHHHCCCCC
MYALRVQGDSMIEVGINDGDIAIIEKRDIARNGEIVVALIEDEATLKVYYKEQDQIRLEA
EEEEEECCCCEEEEECCCCCEEEEECCCCCCCCCEEEEEECCCCEEEEEEECCCEEEEEE
RNPKYKPIKTKKATVMGKLIGLYRIY
CCCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA