| Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_005823 |
| Length | 4,277,185 |
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The map label for this gene is 45658147
Identifier: 45658147
GI number: 45658147
Start: 2772974
End: 2774050
Strand: Direct
Name: 45658147
Synonym: LIC12299
Alternate gene names: NA
Gene position: 2772974-2774050 (Clockwise)
Preceding gene: 45658141
Following gene: 45658148
Centisome position: 64.83
GC content: 31.85
Gene sequence:
>1077_bases GTGGGGAAAAACAATTCGTTCAGACCGAAAAATTCTTTCTTAAAGTTCCAAGTTGTATTCGGTTTTTTTCTTTTGAGTTT TATTTCTTTAAATTCAGAAGAAAGATCCTCAATTTTAGATCCTACGTTTTTTTTAATTCATAAGAATCTGAATCCTTCTT TAGGAGGTTTATTCGAAACCAGAAAAAAATTTACTTCTTATGGAGCCTGGCTTGAACTTCCAGTTTGGAAACGAGAACGT AAACATTTTTGGAAAACCCATTTTCTTTATGAGAATCACAAGACTTTTTCAGTCGTTCATCAAACTTACATAGGACTTGA ATATTCTTTTATTTCAGAAAAGAAGGATCTGCACCCTTCCGTTTTTGTAGGTTGGGAAAGAGGAGAAAAGGATTTAGGAA TTTTCGGAATCCACCTTACAATTCCGGACAAACAAACGATCCAAGTTTTTGGAAAAACTGGAAAAGATTTTAAAAGTGGT TCTATCTTTCTTCATTCTAACTTTGATACTGGACTTCAATTATTTTTAGGATTTTCAAGGACATGGGACAAATCCTATAC CGAAGATCAATTCACTCTTGGAATCAGGGTTTCTTGGGAAAAAATTTACTCTTCTTTTTTCTGGAATCAAACGCAGGAAG AAGAATCATTTCTAACCGGGAAATTTGGAATCAGTAATTTCCAACAAGATCTCAAATCTAAAACACTTTTTGAATCCACA GACGAATTTCAGTCGAATTCACTTTTTAAATCTAAAAATTTAAGTTCTAAAAACACAAAATCAAAATCGTTCGAAACTTC TCTTTTAGAAAAAGATAAAACAAATTATTCCTACATAAGTTCATTTATTCGCAGTTATACGAATATTTCGATTTCCGTTC AGGAATTATTGGCCGCCGGTTTTACTCTTTCCTTCGCTTTGGAAATTTCTAAGGCGAGCTATAACTCTAAAGAAGAATTT CTAAAGTTATTTCATTCTCTTTCAGTAAAAGAACAAACCAAAATTTTCGTTCTTTTGAAAAAGAAAAATCCGAAGCACAT TCTTAAAAATTCAATTCTTCCCAAAGATAAAAGATGA
Upstream 100 bases:
>100_bases TCCGGACAAAACCGCCTGTGTTCTGATTTTTTTTTTAAAAAAATTTCATTTTTTTCAAAAAAACCGCTCCCCCAAATAAT TTCCTCGAACCGCTTTCAGA
Downstream 100 bases:
>100_bases TTTTTCCATTAAAACGTCCACTTAGAATTTTAAAAACGCGTTCACTACGATTGGTTTTTTATTTTCTATTTTTAAAATCA AAACTCAGAGAAAATTCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MGKNNSFRPKNSFLKFQVVFGFFLLSFISLNSEERSSILDPTFFLIHKNLNPSLGGLFETRKKFTSYGAWLELPVWKRER KHFWKTHFLYENHKTFSVVHQTYIGLEYSFISEKKDLHPSVFVGWERGEKDLGIFGIHLTIPDKQTIQVFGKTGKDFKSG SIFLHSNFDTGLQLFLGFSRTWDKSYTEDQFTLGIRVSWEKIYSSFFWNQTQEEESFLTGKFGISNFQQDLKSKTLFEST DEFQSNSLFKSKNLSSKNTKSKSFETSLLEKDKTNYSYISSFIRSYTNISISVQELLAAGFTLSFALEISKASYNSKEEF LKLFHSLSVKEQTKIFVLLKKKNPKHILKNSILPKDKR
Sequences:
>Translated_358_residues MGKNNSFRPKNSFLKFQVVFGFFLLSFISLNSEERSSILDPTFFLIHKNLNPSLGGLFETRKKFTSYGAWLELPVWKRER KHFWKTHFLYENHKTFSVVHQTYIGLEYSFISEKKDLHPSVFVGWERGEKDLGIFGIHLTIPDKQTIQVFGKTGKDFKSG SIFLHSNFDTGLQLFLGFSRTWDKSYTEDQFTLGIRVSWEKIYSSFFWNQTQEEESFLTGKFGISNFQQDLKSKTLFEST DEFQSNSLFKSKNLSSKNTKSKSFETSLLEKDKTNYSYISSFIRSYTNISISVQELLAAGFTLSFALEISKASYNSKEEF LKLFHSLSVKEQTKIFVLLKKKNPKHILKNSILPKDKR >Mature_357_residues GKNNSFRPKNSFLKFQVVFGFFLLSFISLNSEERSSILDPTFFLIHKNLNPSLGGLFETRKKFTSYGAWLELPVWKRERK HFWKTHFLYENHKTFSVVHQTYIGLEYSFISEKKDLHPSVFVGWERGEKDLGIFGIHLTIPDKQTIQVFGKTGKDFKSGS IFLHSNFDTGLQLFLGFSRTWDKSYTEDQFTLGIRVSWEKIYSSFFWNQTQEEESFLTGKFGISNFQQDLKSKTLFESTD EFQSNSLFKSKNLSSKNTKSKSFETSLLEKDKTNYSYISSFIRSYTNISISVQELLAAGFTLSFALEISKASYNSKEEFL KLFHSLSVKEQTKIFVLLKKKNPKHILKNSILPKDKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41739; Mature: 41608
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKNNSFRPKNSFLKFQVVFGFFLLSFISLNSEERSSILDPTFFLIHKNLNPSLGGLFET CCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEECCCCCCHHHHHHH RKKFTSYGAWLELPVWKRERKHFWKTHFLYENHKTFSVVHQTYIGLEYSFISEKKDLHPS HHHHHHCCCEEECCCHHHHHHHHHHHHEEEECCCHHHHHHHHHHCEEEEECCCCCCCCCE VFVGWERGEKDLGIFGIHLTIPDKQTIQVFGKTGKDFKSGSIFLHSNFDTGLQLFLGFSR EEEEECCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEECCCCCHHHHHHCCCC TWDKSYTEDQFTLGIRVSWEKIYSSFFWNQTQEEESFLTGKFGISNFQQDLKSKTLFEST CCCCCCCCCEEEEEEEEEHHHHHHHHHCCCCCCHHHHEECCCCHHHHHHHHHHHHHHHCH DEFQSNSLFKSKNLSSKNTKSKSFETSLLEKDKTNYSYISSFIRSYTNISISVQELLAAG HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEHHHHHHCC FTLSFALEISKASYNSKEEFLKLFHSLSVKEQTKIFVLLKKKNPKHILKNSILPKDKR CEEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHCCCCCCCC >Mature Secondary Structure GKNNSFRPKNSFLKFQVVFGFFLLSFISLNSEERSSILDPTFFLIHKNLNPSLGGLFET CCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEECCCCCCHHHHHHH RKKFTSYGAWLELPVWKRERKHFWKTHFLYENHKTFSVVHQTYIGLEYSFISEKKDLHPS HHHHHHCCCEEECCCHHHHHHHHHHHHEEEECCCHHHHHHHHHHCEEEEECCCCCCCCCE VFVGWERGEKDLGIFGIHLTIPDKQTIQVFGKTGKDFKSGSIFLHSNFDTGLQLFLGFSR EEEEECCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEECCCCCHHHHHHCCCC TWDKSYTEDQFTLGIRVSWEKIYSSFFWNQTQEEESFLTGKFGISNFQQDLKSKTLFEST CCCCCCCCCEEEEEEEEEHHHHHHHHHCCCCCCHHHHEECCCCHHHHHHHHHHHHHHHCH DEFQSNSLFKSKNLSSKNTKSKSFETSLLEKDKTNYSYISSFIRSYTNISISVQELLAAG HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEHHHHHHCC FTLSFALEISKASYNSKEEFLKLFHSLSVKEQTKIFVLLKKKNPKHILKNSILPKDKR CEEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA