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The map label for this gene is 45658101

Identifier: 45658101

GI number: 45658101

Start: 2716820

End: 2718424

Strand: Reverse

Name: 45658101

Synonym: LIC12252

Alternate gene names: NA

Gene position: 2718424-2716820 (Counterclockwise)

Preceding gene: 45658102

Following gene: 45658098

Centisome position: 63.56

GC content: 39.19

Gene sequence:

>1605_bases
ATGAAAAACGATAACCAGATTTTGAAACTGCAAAGATCTTCCATTCCTATTTTTTGCAAAATTAGAAAGTGGAATTTAAA
AAATTTCTACAAATCCTTTTTTACAATTTTTGTAATTCCTGGATGTATTTTTATTTCTTCTTTAAAAATTTCTGCCCAAG
AAAATTTTACTGGTTGTGACAAACCAGAAGCAAGAAAGGATCTTCCGTTTTCGATCGATCGGGTCAAACAGATGTGTAAA
AAAGATCTGGATAATAAAAAAGAAGGTTGGTATCCTACGGGACTTCCTTTGATTAATTCCGATCCAAATGAAGGAATTGG
ATATGGGGTCAGAGTTTATGGCTATAACAATGGAAAAAAAAGTGATCCGTTTTTTGAATATACTCCGTATAGACTTCGTT
TTTTTGCACAATATTTTAATACGACAAAAAATGCTCAATACCACCAACTCAGTTTGGACATGCCCTATGTAGCAAATACG
CAGTGGAGGCTTCGCGCGGATGCTTTACTTACGATTACTCCTACTACTTTGTACTTCGGTGTAGGAGAATCCACGTTAAA
ACCTTTAACGTATCACGAACGAAATCAGCCAGGCGCGCCACAGGTTACGAATGGGCAGTACGGTTTACAGGAATCTACGT
TTCAATATCAAAGACCGGGAGGTTCCGGAGATCCGATTGAACTTGGAGGTAGGCTTTATTCAGGAGTTTCTTCTGGCCCT
GGGTTTAATGTAACAGATCGTATGTACAACCGTTATACGATTCAAACTCCTCAGTTGAATTTCAGTACAGAGCGATCTTT
TTTTCACGGAACTGTAAGGCTCGTGGCTGGTTTTAGACTTTCGAATAACATTGTACATGTGAACGACGGAAAATTTGTAA
AGTCGGTGGATCCAATTTTTGAAGGAACTCCTTTGAGTAATTCGGGGCAGGTTCCAAACGCTAAAACCAAACTTACCGAA
GACGCGGAAGCCGGAAAAATTTTAGGCTATCACGGAGGATTTGTAAATACTGCTAAGATTGGTCTTGTGTATGATACGAG
AGATTTTGAACCAGATCCAAACTCCGGTGTTTTTTTGGAAGGCACTTATGAGAAGGCCTCTAAAACGATTGCTTCCGATT
TTGATTTTCAGAAGTATTTTGGACACGCAAAGTTCTTTTATAGTCCGTTTCCGAAGACGTTTGAAAAATTGGTTTTGGCT
TCCAGATTCGGTTTTGGGATTTCGGATGGGAATGTTCCATTTTTTGAATATAGAAATCTTTGGGGTACGGAAAACACTGT
CTCCGGTTTGGGTGGACTTAGGACGCTTAGGGGTTATAAACAGGATCGATTTGTGGGACGTGCGATGGGTTTTGGTACGT
TGGAACTTCGTTGGAAATTTTGGTCATTTTCAGTTGGGGGAGAATACTTCGCGTTAAACTTAGTTCCTTTCTGGGATTTT
GGCAGGGTTTGGAACGATGAACACAAGGCGGGTTTAACTGATTATAAATATTCTCAGGGTTTAGGTCTTAGAATTGCTTG
GAATCAAGCGACGATCATCATGATGGACTATGCAGTTTCTAGAGAAGATAAACAACTCTTTGTCAATTTTAGTCACGCTT
TCTAA

Upstream 100 bases:

>100_bases
TATTAGATTGATTTTTTAGAATATACCTAAAATAGTATATTCTATTTTTTTAACGTATATTGATTTTGGTAAATAATTGT
AAATTTTTGGTTCTAAATAG

Downstream 100 bases:

>100_bases
GGAGACCGTTATCGTTTTCCTTTAGAAAACAATTTGGTAAAATTCGGATTTTGTAATAGTTCCCACACAATTTCAGAATT
TAATAGTAGATTCGGATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Signal Peptide; Lipoprotein; OMA87 Related Protein

Number of amino acids: Translated: 534; Mature: 534

Protein sequence:

>534_residues
MKNDNQILKLQRSSIPIFCKIRKWNLKNFYKSFFTIFVIPGCIFISSLKISAQENFTGCDKPEARKDLPFSIDRVKQMCK
KDLDNKKEGWYPTGLPLINSDPNEGIGYGVRVYGYNNGKKSDPFFEYTPYRLRFFAQYFNTTKNAQYHQLSLDMPYVANT
QWRLRADALLTITPTTLYFGVGESTLKPLTYHERNQPGAPQVTNGQYGLQESTFQYQRPGGSGDPIELGGRLYSGVSSGP
GFNVTDRMYNRYTIQTPQLNFSTERSFFHGTVRLVAGFRLSNNIVHVNDGKFVKSVDPIFEGTPLSNSGQVPNAKTKLTE
DAEAGKILGYHGGFVNTAKIGLVYDTRDFEPDPNSGVFLEGTYEKASKTIASDFDFQKYFGHAKFFYSPFPKTFEKLVLA
SRFGFGISDGNVPFFEYRNLWGTENTVSGLGGLRTLRGYKQDRFVGRAMGFGTLELRWKFWSFSVGGEYFALNLVPFWDF
GRVWNDEHKAGLTDYKYSQGLGLRIAWNQATIIMMDYAVSREDKQLFVNFSHAF

Sequences:

>Translated_534_residues
MKNDNQILKLQRSSIPIFCKIRKWNLKNFYKSFFTIFVIPGCIFISSLKISAQENFTGCDKPEARKDLPFSIDRVKQMCK
KDLDNKKEGWYPTGLPLINSDPNEGIGYGVRVYGYNNGKKSDPFFEYTPYRLRFFAQYFNTTKNAQYHQLSLDMPYVANT
QWRLRADALLTITPTTLYFGVGESTLKPLTYHERNQPGAPQVTNGQYGLQESTFQYQRPGGSGDPIELGGRLYSGVSSGP
GFNVTDRMYNRYTIQTPQLNFSTERSFFHGTVRLVAGFRLSNNIVHVNDGKFVKSVDPIFEGTPLSNSGQVPNAKTKLTE
DAEAGKILGYHGGFVNTAKIGLVYDTRDFEPDPNSGVFLEGTYEKASKTIASDFDFQKYFGHAKFFYSPFPKTFEKLVLA
SRFGFGISDGNVPFFEYRNLWGTENTVSGLGGLRTLRGYKQDRFVGRAMGFGTLELRWKFWSFSVGGEYFALNLVPFWDF
GRVWNDEHKAGLTDYKYSQGLGLRIAWNQATIIMMDYAVSREDKQLFVNFSHAF
>Mature_534_residues
MKNDNQILKLQRSSIPIFCKIRKWNLKNFYKSFFTIFVIPGCIFISSLKISAQENFTGCDKPEARKDLPFSIDRVKQMCK
KDLDNKKEGWYPTGLPLINSDPNEGIGYGVRVYGYNNGKKSDPFFEYTPYRLRFFAQYFNTTKNAQYHQLSLDMPYVANT
QWRLRADALLTITPTTLYFGVGESTLKPLTYHERNQPGAPQVTNGQYGLQESTFQYQRPGGSGDPIELGGRLYSGVSSGP
GFNVTDRMYNRYTIQTPQLNFSTERSFFHGTVRLVAGFRLSNNIVHVNDGKFVKSVDPIFEGTPLSNSGQVPNAKTKLTE
DAEAGKILGYHGGFVNTAKIGLVYDTRDFEPDPNSGVFLEGTYEKASKTIASDFDFQKYFGHAKFFYSPFPKTFEKLVLA
SRFGFGISDGNVPFFEYRNLWGTENTVSGLGGLRTLRGYKQDRFVGRAMGFGTLELRWKFWSFSVGGEYFALNLVPFWDF
GRVWNDEHKAGLTDYKYSQGLGLRIAWNQATIIMMDYAVSREDKQLFVNFSHAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60805; Mature: 60805

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNDNQILKLQRSSIPIFCKIRKWNLKNFYKSFFTIFVIPGCIFISSLKISAQENFTGCD
CCCCCCEEEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHEEHHEEEECCCCCCCCC
KPEARKDLPFSIDRVKQMCKKDLDNKKEGWYPTGLPLINSDPNEGIGYGVRVYGYNNGKK
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCEEEEEEECCCCC
SDPFFEYTPYRLRFFAQYFNTTKNAQYHQLSLDMPYVANTQWRLRADALLTITPTTLYFG
CCCCEEECCHHHHHHHHHHCCCCCCEEEEEEECCCEECCCCEEEEECEEEEEECCEEEEE
VGESTLKPLTYHERNQPGAPQVTNGQYGLQESTFQYQRPGGSGDPIELGGRLYSGVSSGP
CCHHHCCCCEECCCCCCCCCEECCCCCCCCCCCEEEECCCCCCCCCEECCEEECCCCCCC
GFNVTDRMYNRYTIQTPQLNFSTERSFFHGTVRLVAGFRLSNNIVHVNDGKFVKSVDPIF
CCCCHHHHCCEEEEECCCCCCCCCCHHHHEEEEEEEEEEECCCEEEECCCCEEECCCCCC
EGTPLSNSGQVPNAKTKLTEDAEAGKILGYHGGFVNTAKIGLVYDTRDFEPDPNSGVFLE
CCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCEEEEEEEEEEEECCCCCCCCCCCEEEE
GTYEKASKTIASDFDFQKYFGHAKFFYSPFPKTFEKLVLASRFGFGISDGNVPFFEYRNL
ECHHHHHHHHHCCCCHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCC
WGTENTVSGLGGLRTLRGYKQDRFVGRAMGFGTLELRWKFWSFSVGGEYFALNLVPFWDF
CCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEEEEEEECCCCEEEEEEEEECCC
GRVWNDEHKAGLTDYKYSQGLGLRIAWNQATIIMMDYAVSREDKQLFVNFSHAF
CCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEEEECCCCCCEEEEEEECCC
>Mature Secondary Structure
MKNDNQILKLQRSSIPIFCKIRKWNLKNFYKSFFTIFVIPGCIFISSLKISAQENFTGCD
CCCCCCEEEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHEEHHEEEECCCCCCCCC
KPEARKDLPFSIDRVKQMCKKDLDNKKEGWYPTGLPLINSDPNEGIGYGVRVYGYNNGKK
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCEEEEEEECCCCC
SDPFFEYTPYRLRFFAQYFNTTKNAQYHQLSLDMPYVANTQWRLRADALLTITPTTLYFG
CCCCEEECCHHHHHHHHHHCCCCCCEEEEEEECCCEECCCCEEEEECEEEEEECCEEEEE
VGESTLKPLTYHERNQPGAPQVTNGQYGLQESTFQYQRPGGSGDPIELGGRLYSGVSSGP
CCHHHCCCCEECCCCCCCCCEECCCCCCCCCCCEEEECCCCCCCCCEECCEEECCCCCCC
GFNVTDRMYNRYTIQTPQLNFSTERSFFHGTVRLVAGFRLSNNIVHVNDGKFVKSVDPIF
CCCCHHHHCCEEEEECCCCCCCCCCHHHHEEEEEEEEEEECCCEEEECCCCEEECCCCCC
EGTPLSNSGQVPNAKTKLTEDAEAGKILGYHGGFVNTAKIGLVYDTRDFEPDPNSGVFLE
CCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCEEEEEEEEEEEECCCCCCCCCCCEEEE
GTYEKASKTIASDFDFQKYFGHAKFFYSPFPKTFEKLVLASRFGFGISDGNVPFFEYRNL
ECHHHHHHHHHCCCCHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCC
WGTENTVSGLGGLRTLRGYKQDRFVGRAMGFGTLELRWKFWSFSVGGEYFALNLVPFWDF
CCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEEEEEEECCCCEEEEEEEEECCC
GRVWNDEHKAGLTDYKYSQGLGLRIAWNQATIIMMDYAVSREDKQLFVNFSHAF
CCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEEEECCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA