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The map label for this gene is 45658093

Identifier: 45658093

GI number: 45658093

Start: 2708279

End: 2709154

Strand: Reverse

Name: 45658093

Synonym: LIC12244

Alternate gene names: NA

Gene position: 2709154-2708279 (Counterclockwise)

Preceding gene: 45658094

Following gene: 45658092

Centisome position: 63.34

GC content: 34.13

Gene sequence:

>876_bases
ATGCGATTTTGGATTAAGTTATTTTGGGTTCTCGTTTTTGGGACCCTCGCGGCTTTTTTTTATTTTTGTATTCATACTCT
CAAAGAAAGAGAGTCGCTTCTTGTACTGGATGGTTCCGAAGAATTATTAGATTATACTTCTGGACCTGGTTACGTGTTCG
AATGGAAAACGATTTTTCCCTGGAAATACACAGTGGTTCGTTTTCCCATCTTTTCTAAAATTTCCAATGTAGTTTTAAAC
ATAGATCTTTCTTCTGGAATGTTTCCCGAAAATTCCCCAGAAGGAAAAATCAAAATTTCCCTAGAAGTTAGATATTCTTT
ATATCCAAACAAGGCTTTTGAGTTTTTGGAAGCTGCTGGAATTGGACAAGAAAAGATAGATGCATATATTAGAAAAGTAG
TATATTCTGTAATTCGCAAAAAAGTAGAAGAGTTTTTGGCTAATCCAAATGCTCTTAAAACCAATTTAGATAATTATCTG
AGGACAAGTTTTTCTTCGGAACTACTTTCTGAGGAAAAAACATTTCAAAATTTGAATCTAAGAATTTTAGATTTACAGGT
TCCGGAACCCGCTCTGATTACTGGTGTTTATAGAAATCAAAATCTGATTCTTCAAAAAAAATTAGATCTTGCGACCGCCC
TAGGAAAAGCGGAAGCTCATAAGATTGAGGAAGACGCAAAAATTTCTTCGCTTCTTAGACGTTTGGAAAAGACTAAAGAT
TTTATAACTAAAAATCCGGATATGAAAGAGTTTCTTCTTTATGAAAGTTTATCCGACAACGTAGAAGTGATTTTACTTCC
TTCGGAGATGATCTTAGGAGAAGTTCCGTCCTCTAAAAAGAAAAAGAATTCTAAAAGACCCAAAGAGGTAGAATGA

Upstream 100 bases:

>100_bases
GCCTCGTTTATAAACACGCTATTTCTACGATCATTCCCGCCAAGATTATCAAGCTATATACCGAGGAAGCAAAAGACAAT
AAAGACGCAGCTCAAGGATA

Downstream 100 bases:

>100_bases
ACCAAGACAAACCGGTAGTTTTGATTATGGCGGGTGGAAAGGGAGAGCGTTTTTGGCCTCGTTCTAGAATTTCCACACCG
AAACAACTTCAGAAAGTATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MRFWIKLFWVLVFGTLAAFFYFCIHTLKERESLLVLDGSEELLDYTSGPGYVFEWKTIFPWKYTVVRFPIFSKISNVVLN
IDLSSGMFPENSPEGKIKISLEVRYSLYPNKAFEFLEAAGIGQEKIDAYIRKVVYSVIRKKVEEFLANPNALKTNLDNYL
RTSFSSELLSEEKTFQNLNLRILDLQVPEPALITGVYRNQNLILQKKLDLATALGKAEAHKIEEDAKISSLLRRLEKTKD
FITKNPDMKEFLLYESLSDNVEVILLPSEMILGEVPSSKKKKNSKRPKEVE

Sequences:

>Translated_291_residues
MRFWIKLFWVLVFGTLAAFFYFCIHTLKERESLLVLDGSEELLDYTSGPGYVFEWKTIFPWKYTVVRFPIFSKISNVVLN
IDLSSGMFPENSPEGKIKISLEVRYSLYPNKAFEFLEAAGIGQEKIDAYIRKVVYSVIRKKVEEFLANPNALKTNLDNYL
RTSFSSELLSEEKTFQNLNLRILDLQVPEPALITGVYRNQNLILQKKLDLATALGKAEAHKIEEDAKISSLLRRLEKTKD
FITKNPDMKEFLLYESLSDNVEVILLPSEMILGEVPSSKKKKNSKRPKEVE
>Mature_291_residues
MRFWIKLFWVLVFGTLAAFFYFCIHTLKERESLLVLDGSEELLDYTSGPGYVFEWKTIFPWKYTVVRFPIFSKISNVVLN
IDLSSGMFPENSPEGKIKISLEVRYSLYPNKAFEFLEAAGIGQEKIDAYIRKVVYSVIRKKVEEFLANPNALKTNLDNYL
RTSFSSELLSEEKTFQNLNLRILDLQVPEPALITGVYRNQNLILQKKLDLATALGKAEAHKIEEDAKISSLLRRLEKTKD
FITKNPDMKEFLLYESLSDNVEVILLPSEMILGEVPSSKKKKNSKRPKEVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33595; Mature: 33595

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFWIKLFWVLVFGTLAAFFYFCIHTLKERESLLVLDGSEELLDYTSGPGYVFEWKTIFP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCCCEEEEEEEECC
WKYTVVRFPIFSKISNVVLNIDLSSGMFPENSPEGKIKISLEVRYSLYPNKAFEFLEAAG
EEEEEEECHHHHHHCCEEEEEECCCCCCCCCCCCCEEEEEEEEEEEECCHHHHHHHHHHC
IGQEKIDAYIRKVVYSVIRKKVEEFLANPNALKTNLDNYLRTSFSSELLSEEKTFQNLNL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
RILDLQVPEPALITGVYRNQNLILQKKLDLATALGKAEAHKIEEDAKISSLLRRLEKTKD
EEEEEECCCCHHEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FITKNPDMKEFLLYESLSDNVEVILLPSEMILGEVPSSKKKKNSKRPKEVE
HHCCCCCHHHHHHHHHCCCCEEEEEECHHHHHCCCCCCHHHHCCCCCCCCC
>Mature Secondary Structure
MRFWIKLFWVLVFGTLAAFFYFCIHTLKERESLLVLDGSEELLDYTSGPGYVFEWKTIFP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCCCEEEEEEEECC
WKYTVVRFPIFSKISNVVLNIDLSSGMFPENSPEGKIKISLEVRYSLYPNKAFEFLEAAG
EEEEEEECHHHHHHCCEEEEEECCCCCCCCCCCCCEEEEEEEEEEEECCHHHHHHHHHHC
IGQEKIDAYIRKVVYSVIRKKVEEFLANPNALKTNLDNYLRTSFSSELLSEEKTFQNLNL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
RILDLQVPEPALITGVYRNQNLILQKKLDLATALGKAEAHKIEEDAKISSLLRRLEKTKD
EEEEEECCCCHHEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FITKNPDMKEFLLYESLSDNVEVILLPSEMILGEVPSSKKKKNSKRPKEVE
HHCCCCCHHHHHHHHHCCCCEEEEEECHHHHHCCCCCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA