| Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_005823 |
| Length | 4,277,185 |
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The map label for this gene is blaR1
Identifier: 45658069
GI number: 45658069
Start: 2678288
End: 2679139
Strand: Direct
Name: blaR1
Synonym: LIC12220
Alternate gene names: 45658069
Gene position: 2678288-2679139 (Clockwise)
Preceding gene: 45658068
Following gene: 45658070
Centisome position: 62.62
GC content: 33.8
Gene sequence:
>852_bases TTGGTTTTAGATTTAGTGAAAAACGGATTCTTAATCTTTTTAGTTATTCTTTCGTTTCTTTCTTGTAAAATTAATTCTTC TAATTATATCCTAAGTACAAAATCTTTTTCCGAAAAAAATCTCAACGGAAACCTCTGTGCGATTTTAATCAATCAAACCA CAAACAATAAAATTTACTTTCAAAAAGATGAATGTTTTTATAAAACTCCCCCTTCTTCTTTGTTTCATCCTGTTTTAGCT TTCATTTCTGTAGAAGGAGGTTATCTTAAAGAAAATCAAACCCTTTTTTTCTGGGATAAAACTAGATACCCTTATATTCG TTGGCAAAAAGATCAAAATCTAAAATCTGCTTTGGAATATTCTGTACACTGGTATTTTACAAATTTATGGAATGATATAG GACCGGAAAAAGGAAAATCACTTTTAGAAAAAATAGGAATCTTTCAGATCCCGAATACAAGAAATTCTTTTTGGTCGGAC GGCTCTTATACAATTTCACCTTCCGAGTTTGCAGATTTTTTAATGCGACTTCAAGAAATTTCTCCACCTATTCGTAAAAA GACGATTCAAACCGTTTGGGATTTGTTAAAAAGAACTCCTGGCTCATACTCCAATGCAACCGGAATTCACGATCTTTCGG GAGACTGGAACGGAGTGGAAGACTATAGATCCGATTCCGCATTTTATTATACACAAGAAGAAACTAGTTCCTGGTTCTGG GTTTCTTTTCAAAAGTCTAATGTTCGATGGCTCTTACTTACTCGTGTCCGAATTTCGGGAGAAGTTACAAATCCTTTGAA AGCGGCGGAACTCACTTCTAAAATTCTCAAAGACGAATCCATCATTCCTTAA
Upstream 100 bases:
>100_bases TAAAATGCAAAAACCTTGGAAGAAAGCGGGAAAAATCTATTTTTTCTTTATTTATATTCCAATCGCGTTTGTTCTAATTT GTATTTCTATTTTAATGTGA
Downstream 100 bases:
>100_bases ACGATCCTAAAAAATCTGAATGACGAAACAGGAATTCGTTCCTACAATGCCTCCGAACATGAAAAAAATATCGCTATTTT ATATTTTTCTAATTTTCTTA
Product: beta-lactamase regulatory protein 1
Products: substituted beta-amino acid
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MVLDLVKNGFLIFLVILSFLSCKINSSNYILSTKSFSEKNLNGNLCAILINQTTNNKIYFQKDECFYKTPPSSLFHPVLA FISVEGGYLKENQTLFFWDKTRYPYIRWQKDQNLKSALEYSVHWYFTNLWNDIGPEKGKSLLEKIGIFQIPNTRNSFWSD GSYTISPSEFADFLMRLQEISPPIRKKTIQTVWDLLKRTPGSYSNATGIHDLSGDWNGVEDYRSDSAFYYTQEETSSWFW VSFQKSNVRWLLLTRVRISGEVTNPLKAAELTSKILKDESIIP
Sequences:
>Translated_283_residues MVLDLVKNGFLIFLVILSFLSCKINSSNYILSTKSFSEKNLNGNLCAILINQTTNNKIYFQKDECFYKTPPSSLFHPVLA FISVEGGYLKENQTLFFWDKTRYPYIRWQKDQNLKSALEYSVHWYFTNLWNDIGPEKGKSLLEKIGIFQIPNTRNSFWSD GSYTISPSEFADFLMRLQEISPPIRKKTIQTVWDLLKRTPGSYSNATGIHDLSGDWNGVEDYRSDSAFYYTQEETSSWFW VSFQKSNVRWLLLTRVRISGEVTNPLKAAELTSKILKDESIIP >Mature_283_residues MVLDLVKNGFLIFLVILSFLSCKINSSNYILSTKSFSEKNLNGNLCAILINQTTNNKIYFQKDECFYKTPPSSLFHPVLA FISVEGGYLKENQTLFFWDKTRYPYIRWQKDQNLKSALEYSVHWYFTNLWNDIGPEKGKSLLEKIGIFQIPNTRNSFWSD GSYTISPSEFADFLMRLQEISPPIRKKTIQTVWDLLKRTPGSYSNATGIHDLSGDWNGVEDYRSDSAFYYTQEETSSWFW VSFQKSNVRWLLLTRVRISGEVTNPLKAAELTSKILKDESIIP
Specific function: BlaR1 is a potential penicillin-binding protein required for induction of beta-lactamase in Bacillus licheniformis [H]
COG id: COG2602
COG function: function code V; Beta-lactamase class D
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M56 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001460 - InterPro: IPR008756 [H]
Pfam domain/function: PF05569 Peptidase_M56; PF00905 Transpeptidase [H]
EC number: 3.5.2.6
Molecular weight: Translated: 32839; Mature: 32839
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLDLVKNGFLIFLVILSFLSCKINSSNYILSTKSFSEKNLNGNLCAILINQTTNNKIYF CEEHHHHCCHHHHHHHHHHHCEEECCCCEEEEECCCCCCCCCCCEEEEEEECCCCCEEEE QKDECFYKTPPSSLFHPVLAFISVEGGYLKENQTLFFWDKTRYPYIRWQKDQNLKSALEY EECCCEEECCCHHHHHHHHHHHCCCCCEEECCCEEEEEECCCCCEEEECCCCCHHHHHHH SVHWYFTNLWNDIGPEKGKSLLEKIGIFQIPNTRNSFWSDGSYTISPSEFADFLMRLQEI HEEEEEEHHHHHCCHHHHHHHHHHCCEEECCCCCCCCCCCCCEEECHHHHHHHHHHHHHC SPPIRKKTIQTVWDLLKRTPGSYSNATGIHDLSGDWNGVEDYRSDSAFYYTQEETSSWFW CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEEECCCCCEEE VSFQKSNVRWLLLTRVRISGEVTNPLKAAELTSKILKDESIIP EEEECCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MVLDLVKNGFLIFLVILSFLSCKINSSNYILSTKSFSEKNLNGNLCAILINQTTNNKIYF CEEHHHHCCHHHHHHHHHHHCEEECCCCEEEEECCCCCCCCCCCEEEEEEECCCCCEEEE QKDECFYKTPPSSLFHPVLAFISVEGGYLKENQTLFFWDKTRYPYIRWQKDQNLKSALEY EECCCEEECCCHHHHHHHHHHHCCCCCEEECCCEEEEEECCCCCEEEECCCCCHHHHHHH SVHWYFTNLWNDIGPEKGKSLLEKIGIFQIPNTRNSFWSDGSYTISPSEFADFLMRLQEI HEEEEEEHHHHHCCHHHHHHHHHHCCEEECCCCCCCCCCCCCEEECHHHHHHHHHHHHHC SPPIRKKTIQTVWDLLKRTPGSYSNATGIHDLSGDWNGVEDYRSDSAFYYTQEETSSWFW CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEEECCCCCEEE VSFQKSNVRWLLLTRVRISGEVTNPLKAAELTSKILKDESIIP EEEECCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: beta-lactam; H2O
Specific reaction: A beta-lactam + H2O = a substituted beta-amino acid
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3040663; 3260234; 2404938 [H]