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The map label for this gene is 45658067

Identifier: 45658067

GI number: 45658067

Start: 2676330

End: 2677589

Strand: Direct

Name: 45658067

Synonym: LIC12218

Alternate gene names: NA

Gene position: 2676330-2677589 (Clockwise)

Preceding gene: 45658061

Following gene: 45658068

Centisome position: 62.57

GC content: 30.08

Gene sequence:

>1260_bases
ATGAACCATCTTTCTCATTTCGAAAAATTATTTAAACTACACTCTCATCGTTCTATATACTTGAGCGTTTGGAAAAAAAA
CGTCATACAAATCATTTTGATTTTAGTTTCTTGTTTTGGTTTTTTAATTTATATCCCGAGTGTATATTTAGCTTGGCAAC
AAGGACTAGGAGAAGTAGTCATCTTAGACACTCTTGCACTTCTTTTAGTATGGTTTCTATTACTACTTCCAAATCGATTC
TACAAACCTAAATCTTACTTTTTAGTATCCTTAATTTTTATCTTAGGTTGTTTACTTTATACTAAAATTGGTTTAGGCGG
AGCAGGAATTCTTTGGTTATTTTTGGTTCCCGTTTTTTGTGGAATTTTTTTAGGCCGCATTATTACGTTTTGGAGTTATG
TAATTACATCTCTTTTCGTTTTTTCAGGAATTTTTTTTATTCATTATAAAATCTGGACCGGATCGATTACTTCCTTTCAA
GTTTTTGTAGTAGGAGCTAACTTTACTTTTTTATGCGGGATTCTTACATTTTTAATCTTAGAAATTTTAAATGAAGCTCG
AAAACAAAGACACCTATTGTTAACTCACAAAAATACAAATAAAAAACTTCAAAATAAAATTTTCGCTTACACAGAAAAAG
AATCAAAACTAATAGAATCTTTAAATTATAAAGAAACTTTATTTAAAGAAATCCAACACAGAGTAAAAAATAATATTCAT
TTAATTTTAGGAATGTTGAATTTAGATAGAGAAAAAGCAGAATCAGAACTCGCTAAAAAAACGATCGAATCCGCGATTGA
TCGGATTCAATCGATGGGAATCGTTCAAGAATATTTATTTTTAAACGATTCATACAAAGTAATTCAAACCAAAGAATATC
TAGATACATTAGTAAATCATATTTTTCTTTCTTACGGTAGACAGGACGGAAGTATTCAAGTAAATTATAATATAACGGAA
GCCTTACTTTCGGTCGACAAGGCAATTCCTTGCGGATTGATTTTAAACGAACTCATGATCAATTCTTTTAAACACGCTTT
TCCAGAAAATCGTAAAGGTAAAATTACGGTATCGTTTCAAAAATCGGACTCAGGATATTTCATTTTAGAAATCGCGGATA
ATGGCATTGGACAAAAATCCGAAAAAAGTAAATCTATGGCAGGGATGAGTCTAATCCAAGCATTTTGCCTTCAATTAAGA
GGAGAAATAGAGATAGAAAAGGAAAATGGATTTTTAGTTCGAGTTCGTTTTTTCCCTTAA

Upstream 100 bases:

>100_bases
AAAAAACTCAAGACAAAAATAAGATGAGAAAGATTTTTCCGGAACCGAATTAGAACGTTTGTTATTTCGCAATCGGAAAG
TTGTAAATGTTTGAATCGAC

Downstream 100 bases:

>100_bases
ACGTATAACCTATTTCTATATAAAAAACACAGACTTTATATCATCTACGAAAGCAAAAAAATGCAGGAACGATTGGTTTT
AAAGTCGTTTTCTAAAAAGA

Product: histidine kinase sensor protein

Products: NA

Alternate protein names: Sensory Transduction Histidine Kinase; Two-Component Sensor Histidine Kinase; Histidine Kinase Sensor Protein; Sensor Histidine Kinase; Multisensor Signal Transduction Histidine Kinase; Sensory Transduction Regulatory Protein; Two-Component System Sensor Histidine Kinase; Histidine Kinase Family; Two-Component Hybrid Sensor And Regulator; PAS Sensor Protein; Sensory Box Histidine Kinase; PAS Fold Family; Histidine Kinase Dimerisation/Phosphoacceptor; Two Component System Sensor Histidine Kinase; Two-Component Sensor And Regulator; Signal-Transducing Histidine Kinase; Ethylene Response Sensor Protein; Response Regulator; Sensory Transduction Protein Kinase; Two Component Sensor Histidine Kinase; Two-Component Sensor Protein; Multi-Sensor Signal Transduction Multi-Kinase; Two-Component Histidine Kinase; Two Component Hybrid Sensor Histidine Kinase And Regulator; ATPase-Like/Sensor Kinase; Sensor Histidine Kinase And Response Regulator Protein

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MNHLSHFEKLFKLHSHRSIYLSVWKKNVIQIILILVSCFGFLIYIPSVYLAWQQGLGEVVILDTLALLLVWFLLLLPNRF
YKPKSYFLVSLIFILGCLLYTKIGLGGAGILWLFLVPVFCGIFLGRIITFWSYVITSLFVFSGIFFIHYKIWTGSITSFQ
VFVVGANFTFLCGILTFLILEILNEARKQRHLLLTHKNTNKKLQNKIFAYTEKESKLIESLNYKETLFKEIQHRVKNNIH
LILGMLNLDREKAESELAKKTIESAIDRIQSMGIVQEYLFLNDSYKVIQTKEYLDTLVNHIFLSYGRQDGSIQVNYNITE
ALLSVDKAIPCGLILNELMINSFKHAFPENRKGKITVSFQKSDSGYFILEIADNGIGQKSEKSKSMAGMSLIQAFCLQLR
GEIEIEKENGFLVRVRFFP

Sequences:

>Translated_419_residues
MNHLSHFEKLFKLHSHRSIYLSVWKKNVIQIILILVSCFGFLIYIPSVYLAWQQGLGEVVILDTLALLLVWFLLLLPNRF
YKPKSYFLVSLIFILGCLLYTKIGLGGAGILWLFLVPVFCGIFLGRIITFWSYVITSLFVFSGIFFIHYKIWTGSITSFQ
VFVVGANFTFLCGILTFLILEILNEARKQRHLLLTHKNTNKKLQNKIFAYTEKESKLIESLNYKETLFKEIQHRVKNNIH
LILGMLNLDREKAESELAKKTIESAIDRIQSMGIVQEYLFLNDSYKVIQTKEYLDTLVNHIFLSYGRQDGSIQVNYNITE
ALLSVDKAIPCGLILNELMINSFKHAFPENRKGKITVSFQKSDSGYFILEIADNGIGQKSEKSKSMAGMSLIQAFCLQLR
GEIEIEKENGFLVRVRFFP
>Mature_419_residues
MNHLSHFEKLFKLHSHRSIYLSVWKKNVIQIILILVSCFGFLIYIPSVYLAWQQGLGEVVILDTLALLLVWFLLLLPNRF
YKPKSYFLVSLIFILGCLLYTKIGLGGAGILWLFLVPVFCGIFLGRIITFWSYVITSLFVFSGIFFIHYKIWTGSITSFQ
VFVVGANFTFLCGILTFLILEILNEARKQRHLLLTHKNTNKKLQNKIFAYTEKESKLIESLNYKETLFKEIQHRVKNNIH
LILGMLNLDREKAESELAKKTIESAIDRIQSMGIVQEYLFLNDSYKVIQTKEYLDTLVNHIFLSYGRQDGSIQVNYNITE
ALLSVDKAIPCGLILNELMINSFKHAFPENRKGKITVSFQKSDSGYFILEIADNGIGQKSEKSKSMAGMSLIQAFCLQLR
GEIEIEKENGFLVRVRFFP

Specific function: Unknown

COG id: COG3920

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48279; Mature: 48279

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHLSHFEKLFKLHSHRSIYLSVWKKNVIQIILILVSCFGFLIYIPSVYLAWQQGLGEVV
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
ILDTLALLLVWFLLLLPNRFYKPKSYFLVSLIFILGCLLYTKIGLGGAGILWLFLVPVFC
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
GIFLGRIITFWSYVITSLFVFSGIFFIHYKIWTGSITSFQVFVVGANFTFLCGILTFLIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEEEECCHHHHHHHHHHHHH
EILNEARKQRHLLLTHKNTNKKLQNKIFAYTEKESKLIESLNYKETLFKEIQHRVKNNIH
HHHHHHHHCCEEEEEECCCCHHHHHHHHHEECHHHHHHHHCCHHHHHHHHHHHHHHCCCE
LILGMLNLDREKAESELAKKTIESAIDRIQSMGIVQEYLFLNDSYKVIQTKEYLDTLVNH
EEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
IFLSYGRQDGSIQVNYNITEALLSVDKAIPCGLILNELMINSFKHAFPENRKGKITVSFQ
HHHHCCCCCCCEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
KSDSGYFILEIADNGIGQKSEKSKSMAGMSLIQAFCLQLRGEIEIEKENGFLVRVRFFP
ECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEECC
>Mature Secondary Structure
MNHLSHFEKLFKLHSHRSIYLSVWKKNVIQIILILVSCFGFLIYIPSVYLAWQQGLGEVV
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
ILDTLALLLVWFLLLLPNRFYKPKSYFLVSLIFILGCLLYTKIGLGGAGILWLFLVPVFC
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
GIFLGRIITFWSYVITSLFVFSGIFFIHYKIWTGSITSFQVFVVGANFTFLCGILTFLIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEEEECCHHHHHHHHHHHHH
EILNEARKQRHLLLTHKNTNKKLQNKIFAYTEKESKLIESLNYKETLFKEIQHRVKNNIH
HHHHHHHHCCEEEEEECCCCHHHHHHHHHEECHHHHHHHHCCHHHHHHHHHHHHHHCCCE
LILGMLNLDREKAESELAKKTIESAIDRIQSMGIVQEYLFLNDSYKVIQTKEYLDTLVNH
EEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
IFLSYGRQDGSIQVNYNITEALLSVDKAIPCGLILNELMINSFKHAFPENRKGKITVSFQ
HHHHCCCCCCCEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
KSDSGYFILEIADNGIGQKSEKSKSMAGMSLIQAFCLQLRGEIEIEKENGFLVRVRFFP
ECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA