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The map label for this gene is 45658012

Identifier: 45658012

GI number: 45658012

Start: 2613060

End: 2614868

Strand: Reverse

Name: 45658012

Synonym: LIC12163

Alternate gene names: NA

Gene position: 2614868-2613060 (Counterclockwise)

Preceding gene: 45658013

Following gene: 45658011

Centisome position: 61.14

GC content: 36.32

Gene sequence:

>1809_bases
ATGAAAATATTATCAATTTATTGGGGAATTTGCTCTAGTGCGTCTTTGTTAATAGATGGAAAAGTAGTCACTTCGGTTCA
TGAAGAAAGATTTACTCGATTTAAAAATGACGATTCATTTCCGGCATATTCTATTAAATATTGTTTGGAGGCCGCGAAGA
TCGGTTCATCGGAATTAGATGGCGCGGCGATAGCCAGTTTTAGTAGTCCTATCGATGACATAATGTTATTTAAAAGTCAA
TGGACGATTGATGACTATTTGAAAGAGCAACATCTGAGATGGAAGCCGTTTTTAGTGAATGGAGAAAACGCTCTCAAATC
TGTTTTGGAGATATTTCCTGAAAAGAAAAAAGCCCGAATAAGTTCTTCTAGCGATGATTATTTTAAGAATCTTGAAAATT
TATCTTTTGAAGAAAGGCAAAACAAATATGATACCGACAGAGAACAAATTCTTGCCGAGTTTTTATCAATAGACAGAACG
AAAGTAAGAAGAATAGAACATCATAGATGTCATGCCGCTTATTCCTATTATGCTTCAAAATATCGTAATAAACCGATTTT
AGCCTTAACCGTTGACGGTTGGGGAGACGGAAAAGACGCAACGATAGGAATTTTTGACGAAAAAGGTAAATATTCTAGAG
TTTACGAAAGTGATCAGTGCGCTATTGGCAGAATTTATCGTTACATGACTTTGATGTTAGGAATGAAGCCGAACGAACAT
GAATTTAAAGTAATGGGGTTGGCGCCTTATGGAAAGGAAACTCACGCCAAAAAAGCGTTAGATATTTTAAGAAATACATT
ATACGTAGACGGAGAAGAATTCAAGTGGAAAGAAAAACCTAAAGATAGCTACTTCTGGTTCAAGGAGCGATTTGAAGGCG
TTCGATTTGATAACATTGCATTTGCTTTACAAAAATGGACAGAAGAGTTATTAGTTGAATGGGTAAAGAATGCAATTAAT
AAATATAAAATACATGATATCGTGATAAGCGGCGGAGTCGCCATGAACATTAAGGCGATGGGTAAGATTGCGGATTTACC
TGAGGTTAAGAGTCTTTTTATTGGGGGTTCTGCAAGTGACGAGTCCATGGCTATAAGTTCTGGTATTTGTTTAGCGGAAG
ATTTGACTAAAGAATCATCTAGAGAATGGAATTCCAATACCATTGAGTCATTGACACGTTTATATTTAGGACCTTCGGCC
TCCTTAAAAGAGGAGGAGAGGGTAGTGGATGGTCTCGATAAAAAGAAGTTCGAGATTATTGAAAATCCAGAGAATAAACG
TATTGCAGAAGTGCTTTTTGAAGGAAAAATTTTAGCAAGAGCGGCTGGAAGAATGGAATTTGGTCAACGGGCTTTAGGGA
ATCGTTCTATTTTAGCTGATCCAATTCATTTAAAAATAAAGGAAAAGATTAATTCTGCAATTAAAAGTAGGGATTTTTGG
ATGCCCTTTGCCCCAGTGGTTATGGACACTTTTGTTGAACGATATCTTTTAAATCCGAAAAGTTTAGAATCACCTCATAT
GACTCTTAGTTTTGATACTACTGAGGAAGGCTATGATGCAATGAGTGCAGCATGTCATCCAGCTGATAGAACCGCTAGAG
CGCAAATACTTAAAGAGCACGATAATCCGGAATTATACTCTCTTCTAAAAGCATTTCAGCATTTAACAGGAAGAGGCGCT
CTTTTGAATACCTCTTTTAATCTCCACGGATTTCCGATAGTTAATTCTCCATCGGAAGCAGTAGATGTGTTAGTGAATTC
CGGTTTAGACGGATTAATTTTAAATTATTTTTTAATTCTTAAAAAATGA

Upstream 100 bases:

>100_bases
TTTTAGAGTAATTTTAAGGTTATAAAAAATTCAAAGGGGAATTCGTTGTTTGTAGGATTTTTTTCAAATTAATTCCTACT
AAAATAATACAACAGAGTCA

Downstream 100 bases:

>100_bases
TTTAAAATCATAAATAAGCGATTTTAAAAGATTTAGTGTTTCAATATATTCTTGTGATTAATTGAAAACTGCTTAAAAAG
TCATTTTTTATAGTAATTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 602; Mature: 602

Protein sequence:

>602_residues
MKILSIYWGICSSASLLIDGKVVTSVHEERFTRFKNDDSFPAYSIKYCLEAAKIGSSELDGAAIASFSSPIDDIMLFKSQ
WTIDDYLKEQHLRWKPFLVNGENALKSVLEIFPEKKKARISSSSDDYFKNLENLSFEERQNKYDTDREQILAEFLSIDRT
KVRRIEHHRCHAAYSYYASKYRNKPILALTVDGWGDGKDATIGIFDEKGKYSRVYESDQCAIGRIYRYMTLMLGMKPNEH
EFKVMGLAPYGKETHAKKALDILRNTLYVDGEEFKWKEKPKDSYFWFKERFEGVRFDNIAFALQKWTEELLVEWVKNAIN
KYKIHDIVISGGVAMNIKAMGKIADLPEVKSLFIGGSASDESMAISSGICLAEDLTKESSREWNSNTIESLTRLYLGPSA
SLKEEERVVDGLDKKKFEIIENPENKRIAEVLFEGKILARAAGRMEFGQRALGNRSILADPIHLKIKEKINSAIKSRDFW
MPFAPVVMDTFVERYLLNPKSLESPHMTLSFDTTEEGYDAMSAACHPADRTARAQILKEHDNPELYSLLKAFQHLTGRGA
LLNTSFNLHGFPIVNSPSEAVDVLVNSGLDGLILNYFLILKK

Sequences:

>Translated_602_residues
MKILSIYWGICSSASLLIDGKVVTSVHEERFTRFKNDDSFPAYSIKYCLEAAKIGSSELDGAAIASFSSPIDDIMLFKSQ
WTIDDYLKEQHLRWKPFLVNGENALKSVLEIFPEKKKARISSSSDDYFKNLENLSFEERQNKYDTDREQILAEFLSIDRT
KVRRIEHHRCHAAYSYYASKYRNKPILALTVDGWGDGKDATIGIFDEKGKYSRVYESDQCAIGRIYRYMTLMLGMKPNEH
EFKVMGLAPYGKETHAKKALDILRNTLYVDGEEFKWKEKPKDSYFWFKERFEGVRFDNIAFALQKWTEELLVEWVKNAIN
KYKIHDIVISGGVAMNIKAMGKIADLPEVKSLFIGGSASDESMAISSGICLAEDLTKESSREWNSNTIESLTRLYLGPSA
SLKEEERVVDGLDKKKFEIIENPENKRIAEVLFEGKILARAAGRMEFGQRALGNRSILADPIHLKIKEKINSAIKSRDFW
MPFAPVVMDTFVERYLLNPKSLESPHMTLSFDTTEEGYDAMSAACHPADRTARAQILKEHDNPELYSLLKAFQHLTGRGA
LLNTSFNLHGFPIVNSPSEAVDVLVNSGLDGLILNYFLILKK
>Mature_602_residues
MKILSIYWGICSSASLLIDGKVVTSVHEERFTRFKNDDSFPAYSIKYCLEAAKIGSSELDGAAIASFSSPIDDIMLFKSQ
WTIDDYLKEQHLRWKPFLVNGENALKSVLEIFPEKKKARISSSSDDYFKNLENLSFEERQNKYDTDREQILAEFLSIDRT
KVRRIEHHRCHAAYSYYASKYRNKPILALTVDGWGDGKDATIGIFDEKGKYSRVYESDQCAIGRIYRYMTLMLGMKPNEH
EFKVMGLAPYGKETHAKKALDILRNTLYVDGEEFKWKEKPKDSYFWFKERFEGVRFDNIAFALQKWTEELLVEWVKNAIN
KYKIHDIVISGGVAMNIKAMGKIADLPEVKSLFIGGSASDESMAISSGICLAEDLTKESSREWNSNTIESLTRLYLGPSA
SLKEEERVVDGLDKKKFEIIENPENKRIAEVLFEGKILARAAGRMEFGQRALGNRSILADPIHLKIKEKINSAIKSRDFW
MPFAPVVMDTFVERYLLNPKSLESPHMTLSFDTTEEGYDAMSAACHPADRTARAQILKEHDNPELYSLLKAFQHLTGRGA
LLNTSFNLHGFPIVNSPSEAVDVLVNSGLDGLILNYFLILKK

Specific function: Unknown

COG id: COG2192

COG function: function code O; Predicted carbamoyl transferase, NodU family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NodU/CmcH family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003696 [H]

Pfam domain/function: PF02543 CmcH_NodU [H]

EC number: NA

Molecular weight: Translated: 68599; Mature: 68599

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILSIYWGICSSASLLIDGKVVTSVHEERFTRFKNDDSFPAYSIKYCLEAAKIGSSELD
CCEEEEEHHHHCCCEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCC
GAAIASFSSPIDDIMLFKSQWTIDDYLKEQHLRWKPFLVNGENALKSVLEIFPEKKKARI
CHHHHHCCCCHHHHHHHHCCCCHHHHHHHCCCCCCCEEECCHHHHHHHHHHCCCHHHHHC
SSSSDDYFKNLENLSFEERQNKYDTDREQILAEFLSIDRTKVRRIEHHRCHAAYSYYASK
CCCCCHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
YRNKPILALTVDGWGDGKDATIGIFDEKGKYSRVYESDQCAIGRIYRYMTLMLGMKPNEH
HCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
EFKVMGLAPYGKETHAKKALDILRNTLYVDGEEFKWKEKPKDSYFWFKERFEGVRFDNIA
CEEEEEECCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHCCCCCCHHHH
FALQKWTEELLVEWVKNAINKYKIHDIVISGGVAMNIKAMGKIADLPEVKSLFIGGSASD
HHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCEEEEHHHHCCCCCCCHHHHEEECCCCCC
ESMAISSGICLAEDLTKESSREWNSNTIESLTRLYLGPSASLKEEERVVDGLDKKKFEII
CCEEHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCHHHH
ENPENKRIAEVLFEGKILARAAGRMEFGQRALGNRSILADPIHLKIKEKINSAIKSRDFW
CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHCCCCC
MPFAPVVMDTFVERYLLNPKSLESPHMTLSFDTTEEGYDAMSAACHPADRTARAQILKEH
CCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHC
DNPELYSLLKAFQHLTGRGALLNTSFNLHGFPIVNSPSEAVDVLVNSGLDGLILNYFLIL
CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEECCCHHHHHHHHHCCCCHHHHHHHHHC
KK
CC
>Mature Secondary Structure
MKILSIYWGICSSASLLIDGKVVTSVHEERFTRFKNDDSFPAYSIKYCLEAAKIGSSELD
CCEEEEEHHHHCCCEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCC
GAAIASFSSPIDDIMLFKSQWTIDDYLKEQHLRWKPFLVNGENALKSVLEIFPEKKKARI
CHHHHHCCCCHHHHHHHHCCCCHHHHHHHCCCCCCCEEECCHHHHHHHHHHCCCHHHHHC
SSSSDDYFKNLENLSFEERQNKYDTDREQILAEFLSIDRTKVRRIEHHRCHAAYSYYASK
CCCCCHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
YRNKPILALTVDGWGDGKDATIGIFDEKGKYSRVYESDQCAIGRIYRYMTLMLGMKPNEH
HCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
EFKVMGLAPYGKETHAKKALDILRNTLYVDGEEFKWKEKPKDSYFWFKERFEGVRFDNIA
CEEEEEECCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHCCCCCCHHHH
FALQKWTEELLVEWVKNAINKYKIHDIVISGGVAMNIKAMGKIADLPEVKSLFIGGSASD
HHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCEEEEHHHHCCCCCCCHHHHEEECCCCCC
ESMAISSGICLAEDLTKESSREWNSNTIESLTRLYLGPSASLKEEERVVDGLDKKKFEII
CCEEHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCHHHH
ENPENKRIAEVLFEGKILARAAGRMEFGQRALGNRSILADPIHLKIKEKINSAIKSRDFW
CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHCCCCC
MPFAPVVMDTFVERYLLNPKSLESPHMTLSFDTTEEGYDAMSAACHPADRTARAQILKEH
CCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHC
DNPELYSLLKAFQHLTGRGALLNTSFNLHGFPIVNSPSEAVDVLVNSGLDGLILNYFLIL
CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEECCCHHHHHHHHHCCCCHHHHHHHHHC
KK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]