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The map label for this gene is ssb

Identifier: 45657960

GI number: 45657960

Start: 2553535

End: 2553987

Strand: Reverse

Name: ssb

Synonym: LIC12112

Alternate gene names: 45657960

Gene position: 2553987-2553535 (Counterclockwise)

Preceding gene: 45657961

Following gene: 304570496

Centisome position: 59.71

GC content: 40.84

Gene sequence:

>453_bases
ATGGCTAATGATATTAATAGAGTAACTTTAGTCGGGCGTTTCACGCGCGACCCTGAATTCAAATCGATCAATGGAACCTC
TTTGGTAAACTTTTCCTTAGCAAATGGTAGAACCTATGTGTCTAACGGAGAAAAAAGAGAAGAGTCCCACTTTTTCGATT
GTGAAGTCTGGGGAAAACCGGCTGATATTATTCAACAATACTGCAAAAAAGGAAAGCAGATTGCTATTGAAGGAAGATTG
AAACAAGATACATGGGAAACTCCAGAAGGAAAAAAAGCGTCTCGAATCCGGATTGTTGTAGAGAATTTTCAACTTCTAGG
TTCTAAAGACGATTCTTCAAGTGGATCTTCTGTTTCCTCTTCTCCAGCATCTGCTGGAGGAAATTCATATCCATCTTCTC
CGGAATACTATAACGCCGCAGCGGATGGTGGTGACGACGACATACCGTTTTAA

Upstream 100 bases:

>100_bases
CACCACTATAAATGTAGCGCAGATCCAAACGCCATTGAAAAAGTGGAAAAGGAATTCTTAATCAATCAAAATATTCTTCG
TTCTATGGTCGTTCGCCTCC

Downstream 100 bases:

>100_bases
TGAGGTAATTTATGAGCGAGAATGAAATTAAAGAAGAACGTTCCGAAAGACCGGAGCAAGGTGACCTTTCCGCAGAAATG
GAAGGGAAACCACAGAGAAA

Product: single-stranded DNA binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MANDINRVTLVGRFTRDPEFKSINGTSLVNFSLANGRTYVSNGEKREESHFFDCEVWGKPADIIQQYCKKGKQIAIEGRL
KQDTWETPEGKKASRIRIVVENFQLLGSKDDSSSGSSVSSSPASAGGNSYPSSPEYYNAAADGGDDDIPF

Sequences:

>Translated_150_residues
MANDINRVTLVGRFTRDPEFKSINGTSLVNFSLANGRTYVSNGEKREESHFFDCEVWGKPADIIQQYCKKGKQIAIEGRL
KQDTWETPEGKKASRIRIVVENFQLLGSKDDSSSGSSVSSSPASAGGNSYPSSPEYYNAAADGGDDDIPF
>Mature_149_residues
ANDINRVTLVGRFTRDPEFKSINGTSLVNFSLANGRTYVSNGEKREESHFFDCEVWGKPADIIQQYCKKGKQIAIEGRLK
QDTWETPEGKKASRIRIVVENFQLLGSKDDSSSGSSVSSSPASAGGNSYPSSPEYYNAAADGGDDDIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=111, Percent_Identity=30.6306306306306, Blast_Score=66, Evalue=8e-13,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 16408; Mature: 16277

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANDINRVTLVGRFTRDPEFKSINGTSLVNFSLANGRTYVSNGEKREESHFFDCEVWGKP
CCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCCCCEEEEEECCCC
ADIIQQYCKKGKQIAIEGRLKQDTWETPEGKKASRIRIVVENFQLLGSKDDSSSGSSVSS
HHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECEEEECCCCCCCCCCCCCC
SPASAGGNSYPSSPEYYNAAADGGDDDIPF
CCCCCCCCCCCCCCCCEECCCCCCCCCCCC
>Mature Secondary Structure 
ANDINRVTLVGRFTRDPEFKSINGTSLVNFSLANGRTYVSNGEKREESHFFDCEVWGKP
CCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCCCCEEEEEECCCC
ADIIQQYCKKGKQIAIEGRLKQDTWETPEGKKASRIRIVVENFQLLGSKDDSSSGSSVSS
HHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECEEEECCCCCCCCCCCCCC
SPASAGGNSYPSSPEYYNAAADGGDDDIPF
CCCCCCCCCCCCCCCCEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]