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The map label for this gene is 45657941

Identifier: 45657941

GI number: 45657941

Start: 2532428

End: 2533252

Strand: Reverse

Name: 45657941

Synonym: LIC12093

Alternate gene names: NA

Gene position: 2533252-2532428 (Counterclockwise)

Preceding gene: 45657948

Following gene: 45657940

Centisome position: 59.23

GC content: 32.97

Gene sequence:

>825_bases
ATGAATAGAATGATATATTTAGGGAAGCAGATTTTTCAAAAGATCTGTATTCAATTGATGATAACTATGGCTGTTACAGT
TACATTACCGATAAAATCCAATAGTAGGGCGCCCAAAGCGGTAAAAGCCCCGCCTGGAAGTATTTTATACGCATATTCAA
AAAACGTAAAGTTGTTAGGAGAAAAATTAGAAATTACTTGCGAAAATCGATGTTCGATCCGGGCCAATTATAAAATCAAT
TCGATTCAAAAAGGAGGTTATCTTTTTGCGTTTGTATTACCTGAGTCAGCTGACTTGGAAATTTTTCAGGATCAAAAAGT
AATTTCAGTCAAATCTAAGCCGGATCTTTCTAGAAAGGAGCTTTTTGATTTTAGGATAGTACAATATAACTGGAATAAAA
GTTACGGTTTACCTCATGTTGCAGAGTTTCTGCTAAATTTAGAAGAAGGAATTCAAGAAATTGAAATTAGATATCAGATG
CGTCCGGGTCAAAATGAGACCGGTTTTGGATATCTTTCTTTTGGAGATTCTGATTTTTGGGGAATAGTAGAATATGATCT
TTGGCCTGCAAAGGAGTGGGTTTCCGAAAATTTTCAACTTACGTTTGAAATGAGTATTCCGGAGGAACGAAAATTTTTTA
TTTGGGGAATACATCGTAAACTCACTTGTTTTGGATTACAAAAAAACGGTTACAAAATAAAGAATTTAGGACTTCAGAAA
TCGTTTTATCATTCAGGAAAAAAAGTTTTACGTTATCAATTTGGATCTAAATTTCCAGATATTCTAAGATGTACTTACAA
GTTAAAAGAACCTTTATATAGATAG

Upstream 100 bases:

>100_bases
GAGGTTTTGGGACAAGTTCTAAGTGTCTTTCACATTAAAATGGGTATATAAAAGTAATATTATAAATTTTGAAATTTAAA
TGGAATGGATTGAGTATTAG

Downstream 100 bases:

>100_bases
AAAAGAAGTAATCAGAAGATGATCTTAGAAAATAATATTTATAGAATCGAAATAATTCTGAAAAAAGTTGAAATCTAAAC
TTTATAGATCGATTCCTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MNRMIYLGKQIFQKICIQLMITMAVTVTLPIKSNSRAPKAVKAPPGSILYAYSKNVKLLGEKLEITCENRCSIRANYKIN
SIQKGGYLFAFVLPESADLEIFQDQKVISVKSKPDLSRKELFDFRIVQYNWNKSYGLPHVAEFLLNLEEGIQEIEIRYQM
RPGQNETGFGYLSFGDSDFWGIVEYDLWPAKEWVSENFQLTFEMSIPEERKFFIWGIHRKLTCFGLQKNGYKIKNLGLQK
SFYHSGKKVLRYQFGSKFPDILRCTYKLKEPLYR

Sequences:

>Translated_274_residues
MNRMIYLGKQIFQKICIQLMITMAVTVTLPIKSNSRAPKAVKAPPGSILYAYSKNVKLLGEKLEITCENRCSIRANYKIN
SIQKGGYLFAFVLPESADLEIFQDQKVISVKSKPDLSRKELFDFRIVQYNWNKSYGLPHVAEFLLNLEEGIQEIEIRYQM
RPGQNETGFGYLSFGDSDFWGIVEYDLWPAKEWVSENFQLTFEMSIPEERKFFIWGIHRKLTCFGLQKNGYKIKNLGLQK
SFYHSGKKVLRYQFGSKFPDILRCTYKLKEPLYR
>Mature_274_residues
MNRMIYLGKQIFQKICIQLMITMAVTVTLPIKSNSRAPKAVKAPPGSILYAYSKNVKLLGEKLEITCENRCSIRANYKIN
SIQKGGYLFAFVLPESADLEIFQDQKVISVKSKPDLSRKELFDFRIVQYNWNKSYGLPHVAEFLLNLEEGIQEIEIRYQM
RPGQNETGFGYLSFGDSDFWGIVEYDLWPAKEWVSENFQLTFEMSIPEERKFFIWGIHRKLTCFGLQKNGYKIKNLGLQK
SFYHSGKKVLRYQFGSKFPDILRCTYKLKEPLYR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32030; Mature: 32030

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRMIYLGKQIFQKICIQLMITMAVTVTLPIKSNSRAPKAVKAPPGSILYAYSKNVKLLG
CCCEEEHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCEEECCCCCEEEEECCCEEEEC
EKLEITCENRCSIRANYKINSIQKGGYLFAFVLPESADLEIFQDQKVISVKSKPDLSRKE
CEEEEEECCCEEEEEEEEEEEEECCCEEEEEEECCCCCCEEECCCEEEEECCCCCCCHHH
LFDFRIVQYNWNKSYGLPHVAEFLLNLEEGIQEIEIRYQMRPGQNETGFGYLSFGDSDFW
HEEEEEEEEECCCCCCCHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCEEEEEECCCCCE
GIVEYDLWPAKEWVSENFQLTFEMSIPEERKFFIWGIHRKLTCFGLQKNGYKIKNLGLQK
EEEEECCCCCHHHHCCCEEEEEEECCCCCCEEEEEEECCEEEEEEECCCCEEEEECCCCH
SFYHSGKKVLRYQFGSKFPDILRCTYKLKEPLYR
HHHHCCHHEEEECCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNRMIYLGKQIFQKICIQLMITMAVTVTLPIKSNSRAPKAVKAPPGSILYAYSKNVKLLG
CCCEEEHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCEEECCCCCEEEEECCCEEEEC
EKLEITCENRCSIRANYKINSIQKGGYLFAFVLPESADLEIFQDQKVISVKSKPDLSRKE
CEEEEEECCCEEEEEEEEEEEEECCCEEEEEEECCCCCCEEECCCEEEEECCCCCCCHHH
LFDFRIVQYNWNKSYGLPHVAEFLLNLEEGIQEIEIRYQMRPGQNETGFGYLSFGDSDFW
HEEEEEEEEECCCCCCCHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCEEEEEECCCCCE
GIVEYDLWPAKEWVSENFQLTFEMSIPEERKFFIWGIHRKLTCFGLQKNGYKIKNLGLQK
EEEEECCCCCHHHHCCCEEEEEEECCCCCCEEEEEEECCEEEEEEECCCCEEEEECCCCH
SFYHSGKKVLRYQFGSKFPDILRCTYKLKEPLYR
HHHHCCHHEEEECCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA