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The map label for this gene is 45657916

Identifier: 45657916

GI number: 45657916

Start: 2506139

End: 2506360

Strand: Reverse

Name: 45657916

Synonym: LIC12068

Alternate gene names: NA

Gene position: 2506360-2506139 (Counterclockwise)

Preceding gene: 45657917

Following gene: 45657915

Centisome position: 58.6

GC content: 35.59

Gene sequence:

>222_bases
ATGAAATTTACGGTTTACGTAAAGCCGAACTCTAAAAAGGTTTTTTTTCGAAAAGAAGAAGACGGGGTTCTAACGATTGC
GGTTCGAGAACCGGCTTTAGAAGGAAAAGCGAACGAGGCCGTGATCGAATCTATCTCTAAAGAAATGAAAGTTCCAAAAA
GTAAGATTCGAATTTTATCTGGCCAAAAAAACAAAAAGAAAATAATCGAAATCGATCTTTAA

Upstream 100 bases:

>100_bases
AATTTTTTTTGCTTCCAGTCTCATTTTTAAAGTGGATGGGATATATCTATTGATCCGAAAGTTTCGTCGAAAACAAGAAA
TAGTCTAAAATGCTGCAAGG

Downstream 100 bases:

>100_bases
AATCTTTTTATATGATAAAAAACAGAATCTTAATTACGATCTTACTTCTACTTCCTGGGATTCTTGCAGCACAAAATAGA
AGTTATACGGAAGATCCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 73

Protein sequence:

>73_residues
MKFTVYVKPNSKKVFFRKEEDGVLTIAVREPALEGKANEAVIESISKEMKVPKSKIRILSGQKNKKKIIEIDL

Sequences:

>Translated_73_residues
MKFTVYVKPNSKKVFFRKEEDGVLTIAVREPALEGKANEAVIESISKEMKVPKSKIRILSGQKNKKKIIEIDL
>Mature_73_residues
MKFTVYVKPNSKKVFFRKEEDGVLTIAVREPALEGKANEAVIESISKEMKVPKSKIRILSGQKNKKKIIEIDL

Specific function: Unknown

COG id: COG1872

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0235 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1736_LEPIN (Q8F5E6)

Other databases:

- EMBL:   AE010300
- RefSeq:   NP_711917.1
- ProteinModelPortal:   Q8F5E6
- SMR:   Q8F5E6
- GeneID:   1151079
- GenomeReviews:   AE010300_GR
- HOGENOM:   HBG472132
- OMA:   NEAVIEV
- ProtClustDB:   CLSK574042
- BioCyc:   LINT-130-01:LINT-130-01-002002-MONOMER
- BioCyc:   LINT189518:LA1736-MONOMER
- HAMAP:   MF_00634
- InterPro:   IPR003746
- Gene3D:   G3DSA:3.30.1200.10

Pfam domain/function: PF02594 DUF167; SSF69786 DUF167

EC number: NA

Molecular weight: Translated: 8318; Mature: 8318

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFTVYVKPNSKKVFFRKEEDGVLTIAVREPALEGKANEAVIESISKEMKVPKSKIRILS
CEEEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHEEEEC
GQKNKKKIIEIDL
CCCCCCEEEEEEC
>Mature Secondary Structure
MKFTVYVKPNSKKVFFRKEEDGVLTIAVREPALEGKANEAVIESISKEMKVPKSKIRILS
CEEEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHEEEEC
GQKNKKKIIEIDL
CCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12712204