Click here to switch to the map view.

The map label for this gene is 45657822

Identifier: 45657822

GI number: 45657822

Start: 2370480

End: 2370857

Strand: Direct

Name: 45657822

Synonym: LIC11966

Alternate gene names: NA

Gene position: 2370480-2370857 (Clockwise)

Preceding gene: 45657821

Following gene: 45657823

Centisome position: 55.42

GC content: 35.19

Gene sequence:

>378_bases
ATGGAAATCATGAACGCTTCTACAAACGATTTAGATGCGTTAAACGCAGCCATGGAAAAGGAAGACCTTACAAACGCAGA
AAATGTTAGAAAAGCTTGGGAAACAAAGCTAGTTTCTTCACTCGATAAGCTTAAAGGAATCAGTGATTTTAAAGGAGATT
CCAGTTTTAAAAATGCAAGCGTCCAAGCTCTCGAAACTTATTTAAACATAGTAAGTAAAGACTACAAACGTTTGATCGAA
TTACGAGGATTAGGTGACAAAGCAGACTCAAATGAAATCAACCAAGTTCTCAATCGTATTAATCAGGATTTTGAAAAAGC
TGTAAATACTCTCAATGCTGCTTCTGATAAATTTGCGAAAGAATACGCTTCTCAATAA

Upstream 100 bases:

>100_bases
GAAAAAACATTCTATCAGTAAAATCATTATAACTGCTTGTTGCATTTTTCTTTTAACATACGGATGCAAACAAGATCCAG
TAGATTACAATAATAAAATC

Downstream 100 bases:

>100_bases
ATTTTTTATTAAAAATACATCGTGATCTAACTTAGTGGCGTTTCCAAGTAAACGCCACTTTTCGAAAAAAGTTCTATTAT
ATTATTAGAGTTGTTGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MEIMNASTNDLDALNAAMEKEDLTNAENVRKAWETKLVSSLDKLKGISDFKGDSSFKNASVQALETYLNIVSKDYKRLIE
LRGLGDKADSNEINQVLNRINQDFEKAVNTLNAASDKFAKEYASQ

Sequences:

>Translated_125_residues
MEIMNASTNDLDALNAAMEKEDLTNAENVRKAWETKLVSSLDKLKGISDFKGDSSFKNASVQALETYLNIVSKDYKRLIE
LRGLGDKADSNEINQVLNRINQDFEKAVNTLNAASDKFAKEYASQ
>Mature_125_residues
MEIMNASTNDLDALNAAMEKEDLTNAENVRKAWETKLVSSLDKLKGISDFKGDSSFKNASVQALETYLNIVSKDYKRLIE
LRGLGDKADSNEINQVLNRINQDFEKAVNTLNAASDKFAKEYASQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13952; Mature: 13952

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIMNASTNDLDALNAAMEKEDLTNAENVRKAWETKLVSSLDKLKGISDFKGDSSFKNAS
CCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
VQALETYLNIVSKDYKRLIELRGLGDKADSNEINQVLNRINQDFEKAVNTLNAASDKFAK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EYASQ
HHHCC
>Mature Secondary Structure
MEIMNASTNDLDALNAAMEKEDLTNAENVRKAWETKLVSSLDKLKGISDFKGDSSFKNAS
CCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
VQALETYLNIVSKDYKRLIELRGLGDKADSNEINQVLNRINQDFEKAVNTLNAASDKFAK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EYASQ
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA